RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
LINC02008-202ENST00000494340 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
LINC02008-202ENST00000494340 CICQ96RK0 1608 aaPredicted RBP13.19□□□□□ -0.3
LINC02008-202ENST00000494340 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
LINC02008-202ENST00000494340 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
LINC02008-202ENST00000494340 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
LINC02008-202ENST00000494340 ITPK1Q13572 414 aa13.18□□□□□ -0.3
LINC02008-202ENST00000494340 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
LINC02008-202ENST00000494340 ZNF530Q6P9A1 599 aaPredicted RBP13.18□□□□□ -0.3
LINC02008-202ENST00000494340 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
LINC02008-202ENST00000494340 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
LINC02008-202ENST00000494340 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
LINC02008-202ENST00000494340 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
LINC02008-202ENST00000494340 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
LINC02008-202ENST00000494340 ADRA2BP18089 450 aa13.17□□□□□ -0.3
LINC02008-202ENST00000494340 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
LINC02008-202ENST00000494340 MSL1Q68DK7 614 aa13.17□□□□□ -0.3
LINC02008-202ENST00000494340 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
LINC02008-202ENST00000494340 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
LINC02008-202ENST00000494340 MTHFSP49914 203 aa13.16□□□□□ -0.3
LINC02008-202ENST00000494340 CABP4P57796 275 aa13.16□□□□□ -0.3
LINC02008-202ENST00000494340 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
LINC02008-202ENST00000494340 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
LINC02008-202ENST00000494340 GNPATO15228 680 aa13.15□□□□□ -0.3
LINC02008-202ENST00000494340 PHF14O94880 888 aa13.15□□□□□ -0.3
LINC02008-202ENST00000494340 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
LINC02008-202ENST00000494340 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
LINC02008-202ENST00000494340 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
LINC02008-202ENST00000494340 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
LINC02008-202ENST00000494340 MRC1P22897 1456 aa13.14□□□□□ -0.31
LINC02008-202ENST00000494340 ADAMTS7Q9UKP4 1686 aa13.14□□□□□ -0.31
LINC02008-202ENST00000494340 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
LINC02008-202ENST00000494340 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
LINC02008-202ENST00000494340 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
LINC02008-202ENST00000494340 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
LINC02008-202ENST00000494340 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC02008-202ENST00000494340 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
LINC02008-202ENST00000494340 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
LINC02008-202ENST00000494340 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
LINC02008-202ENST00000494340 TJP1Q07157 1748 aa13.11□□□□□ -0.31
LINC02008-202ENST00000494340 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
LINC02008-202ENST00000494340 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
LINC02008-202ENST00000494340 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
LINC02008-202ENST00000494340 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
LINC02008-202ENST00000494340 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
LINC02008-202ENST00000494340 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
LINC02008-202ENST00000494340 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
LINC02008-202ENST00000494340 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
LINC02008-202ENST00000494340 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
LINC02008-202ENST00000494340 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
LINC02008-202ENST00000494340 MMP10P09238 476 aa13.08□□□□□ -0.32
LINC02008-202ENST00000494340 GYS1P13807 737 aa13.08□□□□□ -0.32
LINC02008-202ENST00000494340 RFC4P35249 363 aa13.08□□□□□ -0.32
LINC02008-202ENST00000494340 TGFB2P61812 414 aa13.08□□□□□ -0.32
LINC02008-202ENST00000494340 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
LINC02008-202ENST00000494340 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
LINC02008-202ENST00000494340 HMOX1P09601 288 aa13.07□□□□□ -0.32
LINC02008-202ENST00000494340 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
LINC02008-202ENST00000494340 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
LINC02008-202ENST00000494340 CCDC87Q9NVE4 849 aa13.07□□□□□ -0.32
LINC02008-202ENST00000494340 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
LINC02008-202ENST00000494340 ADCY9O60503 1353 aa13.07□□□□□ -0.32
LINC02008-202ENST00000494340 PXDNLA1KZ92 1463 aa13.06□□□□□ -0.32
LINC02008-202ENST00000494340 C1QTNF8P60827 252 aa13.06□□□□□ -0.32
LINC02008-202ENST00000494340 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
LINC02008-202ENST00000494340 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
LINC02008-202ENST00000494340 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
LINC02008-202ENST00000494340 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
LINC02008-202ENST00000494340 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
LINC02008-202ENST00000494340 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
LINC02008-202ENST00000494340 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
LINC02008-202ENST00000494340 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
LINC02008-202ENST00000494340 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
LINC02008-202ENST00000494340 SIPA1L3O60292 1781 aaPredicted RBP13.03□□□□□ -0.32
LINC02008-202ENST00000494340 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
LINC02008-202ENST00000494340 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
LINC02008-202ENST00000494340 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
LINC02008-202ENST00000494340 N4BP2Q86UW6 1770 aaPredicted RBP13.02□□□□□ -0.32
LINC02008-202ENST00000494340 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
LINC02008-202ENST00000494340 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
LINC02008-202ENST00000494340 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.33
LINC02008-202ENST00000494340 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
LINC02008-202ENST00000494340 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
LINC02008-202ENST00000494340 COL15A1P39059 1388 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 ZPR1O75312 459 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 TM4SF1P30408 202 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 SLC39A6Q13433 755 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 TTC5Q8N0Z6 440 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
LINC02008-202ENST00000494340 NARFQ9UHQ1 456 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 NUDCQ9Y266 331 aa13□□□□□ -0.33
LINC02008-202ENST00000494340 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
LINC02008-202ENST00000494340 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
LINC02008-202ENST00000494340 TEFQ10587 303 aa12.99□□□□□ -0.33
LINC02008-202ENST00000494340 FKBP8Q14318 412 aa12.99□□□□□ -0.33
LINC02008-202ENST00000494340 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
LINC02008-202ENST00000494340 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
LINC02008-202ENST00000494340 STARD3NLO95772 234 aa12.98□□□□□ -0.33
LINC02008-202ENST00000494340 DPEP1P16444 411 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms