RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 SIK1P57059 783 aa18.39■□□□□ 0.53
PDCD11-206ENST00000493610 COL5A3P25940 1745 aaPredicted RBP18.38■□□□□ 0.53
PDCD11-206ENST00000493610 C1orf141Q5JVX7 400 aa18.38■□□□□ 0.53
PDCD11-206ENST00000493610 LINC00116Q8NCU8 138 aa18.38■□□□□ 0.53
PDCD11-206ENST00000493610 SPON1Q9HCB6 807 aa18.38■□□□□ 0.53
PDCD11-206ENST00000493610 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
PDCD11-206ENST00000493610 SMIM5Q71RC9 77 aa18.37■□□□□ 0.53
PDCD11-206ENST00000493610 NFATC2IPQ8NCF5 419 aa18.37■□□□□ 0.53
PDCD11-206ENST00000493610 ATF5Q9Y2D1 282 aaPredicted RBP18.37■□□□□ 0.53
PDCD11-206ENST00000493610 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
PDCD11-206ENST00000493610 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
PDCD11-206ENST00000493610 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
PDCD11-206ENST00000493610 CABP4P57796 275 aa18.36■□□□□ 0.53
PDCD11-206ENST00000493610 TJP1Q07157 1748 aa18.36■□□□□ 0.53
PDCD11-206ENST00000493610 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
PDCD11-206ENST00000493610 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
PDCD11-206ENST00000493610 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
PDCD11-206ENST00000493610 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
PDCD11-206ENST00000493610 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
PDCD11-206ENST00000493610 MTFR1LQ9H019 292 aa18.34■□□□□ 0.53
PDCD11-206ENST00000493610 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
PDCD11-206ENST00000493610 TFCP2L1Q9NZI6 479 aa18.34■□□□□ 0.53
PDCD11-206ENST00000493610 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.53
PDCD11-206ENST00000493610 UBR2Q8IWV8 1755 aa18.32■□□□□ 0.52
PDCD11-206ENST00000493610 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
PDCD11-206ENST00000493610 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDCD11-206ENST00000493610 RALBP1Q15311 655 aa18.32■□□□□ 0.52
PDCD11-206ENST00000493610 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
PDCD11-206ENST00000493610 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
PDCD11-206ENST00000493610 FCHSD2O94868 740 aa18.31■□□□□ 0.52
PDCD11-206ENST00000493610 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
PDCD11-206ENST00000493610 SLC16A10Q8TF71 515 aa18.3■□□□□ 0.52
PDCD11-206ENST00000493610 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
PDCD11-206ENST00000493610 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
PDCD11-206ENST00000493610 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
PDCD11-206ENST00000493610 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
PDCD11-206ENST00000493610 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
PDCD11-206ENST00000493610 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
PDCD11-206ENST00000493610 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
PDCD11-206ENST00000493610 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
PDCD11-206ENST00000493610 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
PDCD11-206ENST00000493610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
PDCD11-206ENST00000493610 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
PDCD11-206ENST00000493610 CNTNAP4Q9C0A0 1308 aa18.25■□□□□ 0.51
PDCD11-206ENST00000493610 RC3H1Q5TC82 1133 aaKnown RBP18.25■□□□□ 0.51
PDCD11-206ENST00000493610 AK7Q96M32 723 aa18.25■□□□□ 0.51
PDCD11-206ENST00000493610 C4AP0C0L4 1744 aa18.25■□□□□ 0.51
PDCD11-206ENST00000493610 GNPATO15228 680 aa18.24■□□□□ 0.51
PDCD11-206ENST00000493610 SSFA2P28290 1259 aa18.24■□□□□ 0.51
PDCD11-206ENST00000493610 KCNQ3O43525 872 aa18.23■□□□□ 0.51
PDCD11-206ENST00000493610 PHF14O94880 888 aa18.23■□□□□ 0.51
PDCD11-206ENST00000493610 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
PDCD11-206ENST00000493610 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
PDCD11-206ENST00000493610 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
PDCD11-206ENST00000493610 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
PDCD11-206ENST00000493610 FHDC1Q9C0D6 1143 aaPredicted RBP18.23■□□□□ 0.51
PDCD11-206ENST00000493610 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
PDCD11-206ENST00000493610 ARXQ96QS3 562 aa18.22■□□□□ 0.51
PDCD11-206ENST00000493610 SYT17Q9BSW7 474 aa18.22■□□□□ 0.51
PDCD11-206ENST00000493610 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
PDCD11-206ENST00000493610 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
PDCD11-206ENST00000493610 CRKLP46109 303 aaKnown RBP18.21■□□□□ 0.51
PDCD11-206ENST00000493610 MCM10Q7L590 875 aa18.21■□□□□ 0.51
PDCD11-206ENST00000493610 ZNF316A6NFI3 1004 aaPredicted RBP18.2■□□□□ 0.5
PDCD11-206ENST00000493610 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
PDCD11-206ENST00000493610 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
PDCD11-206ENST00000493610 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
PDCD11-206ENST00000493610 MSH5O43196 834 aa18.19■□□□□ 0.5
PDCD11-206ENST00000493610 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
PDCD11-206ENST00000493610 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
PDCD11-206ENST00000493610 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
PDCD11-206ENST00000493610 TEFQ10587 303 aa18.18■□□□□ 0.5
PDCD11-206ENST00000493610 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
PDCD11-206ENST00000493610 NFE2L2Q16236 605 aa18.17■□□□□ 0.5
PDCD11-206ENST00000493610 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
PDCD11-206ENST00000493610 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
PDCD11-206ENST00000493610 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
PDCD11-206ENST00000493610 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
PDCD11-206ENST00000493610 GYS1P13807 737 aa18.15■□□□□ 0.5
PDCD11-206ENST00000493610 NLGN2Q8NFZ4 835 aa18.15■□□□□ 0.5
PDCD11-206ENST00000493610 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
PDCD11-206ENST00000493610 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
PDCD11-206ENST00000493610 ZBTB1Q9Y2K1 713 aa18.15■□□□□ 0.5
PDCD11-206ENST00000493610 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
PDCD11-206ENST00000493610 PRAMEF22A3QJZ6 481 aa18.14■□□□□ 0.49
PDCD11-206ENST00000493610 ADRA2BP18089 450 aa18.14■□□□□ 0.49
PDCD11-206ENST00000493610 POLD1P28340 1107 aa18.14■□□□□ 0.49
PDCD11-206ENST00000493610 TRAPPC3LQ5T215 181 aa18.14■□□□□ 0.49
PDCD11-206ENST00000493610 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
PDCD11-206ENST00000493610 KIAA1551Q9HCM1 1747 aa18.13■□□□□ 0.49
PDCD11-206ENST00000493610 BTBD11A6QL63 1104 aa18.13■□□□□ 0.49
PDCD11-206ENST00000493610 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
PDCD11-206ENST00000493610 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
PDCD11-206ENST00000493610 USP42Q9H9J4 1324 aaKnown RBP18.12■□□□□ 0.49
PDCD11-206ENST00000493610 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
PDCD11-206ENST00000493610 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
PDCD11-206ENST00000493610 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
PDCD11-206ENST00000493610 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
PDCD11-206ENST00000493610 RTF1Q92541 710 aaKnown RBP18.11■□□□□ 0.49
PDCD11-206ENST00000493610 TAF7Q15545 349 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms