RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
TFE3-204ENST00000493583 PIK3C2BO00750 1634 aa16.76■□□□□ 0.27
TFE3-204ENST00000493583 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
TFE3-204ENST00000493583 CYP2E1P05181 493 aaPredicted RBP16.75■□□□□ 0.27
TFE3-204ENST00000493583 CAMK4Q16566 473 aa16.75■□□□□ 0.27
TFE3-204ENST00000493583 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
TFE3-204ENST00000493583 BBXQ8WY36 941 aaPredicted RBP16.75■□□□□ 0.27
TFE3-204ENST00000493583 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
TFE3-204ENST00000493583 NRXN1Q9ULB1 1477 aa16.75■□□□□ 0.27
TFE3-204ENST00000493583 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
TFE3-204ENST00000493583 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
TFE3-204ENST00000493583 EIF4A2Q14240 407 aaKnown RBP16.74■□□□□ 0.27
TFE3-204ENST00000493583 PPLO60437 1756 aa16.74■□□□□ 0.27
TFE3-204ENST00000493583 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
TFE3-204ENST00000493583 FOSBP53539 338 aa16.74■□□□□ 0.27
TFE3-204ENST00000493583 CCDC9Q9Y3X0 531 aaKnown RBP16.73■□□□□ 0.27
TFE3-204ENST00000493583 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
TFE3-204ENST00000493583 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
TFE3-204ENST00000493583 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
TFE3-204ENST00000493583 EID1Q9Y6B2 187 aa16.72■□□□□ 0.27
TFE3-204ENST00000493583 PTPRMP28827 1452 aa16.72■□□□□ 0.27
TFE3-204ENST00000493583 COL9A3Q14050 684 aaPredicted RBP16.72■□□□□ 0.27
TFE3-204ENST00000493583 ROBO2Q9HCK4 1378 aa16.71■□□□□ 0.27
TFE3-204ENST00000493583 VPS37CA5D8V6 355 aaPredicted RBP16.71■□□□□ 0.27
TFE3-204ENST00000493583 ADCY5O95622 1261 aa16.71■□□□□ 0.27
TFE3-204ENST00000493583 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
TFE3-204ENST00000493583 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
TFE3-204ENST00000493583 NECAB1Q8N987 351 aa16.71■□□□□ 0.26
TFE3-204ENST00000493583 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.26
TFE3-204ENST00000493583 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
TFE3-204ENST00000493583 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
TFE3-204ENST00000493583 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
TFE3-204ENST00000493583 MX1P20591 662 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 PTMSP20962 102 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
TFE3-204ENST00000493583 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
TFE3-204ENST00000493583 PDLIM2Q96JY6 352 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 NSD2O96028 1365 aa16.69■□□□□ 0.26
TFE3-204ENST00000493583 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 A0A087WWV3 80 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 KIAA2012Q0VF49 1180 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 CWC22Q9HCG8 908 aaKnown RBP16.68■□□□□ 0.26
TFE3-204ENST00000493583 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
TFE3-204ENST00000493583 LARGE1O95461 756 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 HDGFP51858 240 aaKnown RBP16.68■□□□□ 0.26
TFE3-204ENST00000493583 RPAP2Q8IXW5 612 aaPredicted RBP16.68■□□□□ 0.26
TFE3-204ENST00000493583 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 ZBTB9Q96C00 473 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 CD163L1Q9NR16 1453 aa16.68■□□□□ 0.26
TFE3-204ENST00000493583 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
TFE3-204ENST00000493583 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
TFE3-204ENST00000493583 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
TFE3-204ENST00000493583 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
TFE3-204ENST00000493583 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
TFE3-204ENST00000493583 CHMLP26374 656 aa16.67■□□□□ 0.26
TFE3-204ENST00000493583 DNM1Q05193 864 aaKnown RBP16.67■□□□□ 0.26
TFE3-204ENST00000493583 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
TFE3-204ENST00000493583 NAA30Q147X3 362 aaPredicted RBP16.67■□□□□ 0.26
TFE3-204ENST00000493583 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
TFE3-204ENST00000493583 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
TFE3-204ENST00000493583 TNRQ92752 1358 aa16.66■□□□□ 0.26
TFE3-204ENST00000493583 KCNA6P17658 529 aa16.66■□□□□ 0.26
TFE3-204ENST00000493583 STK3Q13188 491 aa16.66■□□□□ 0.26
TFE3-204ENST00000493583 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
TFE3-204ENST00000493583 BRD1O95696 1058 aa16.66■□□□□ 0.26
TFE3-204ENST00000493583 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
TFE3-204ENST00000493583 NPHP1O15259 732 aa16.65■□□□□ 0.26
TFE3-204ENST00000493583 HMMRO75330 724 aa16.65■□□□□ 0.26
TFE3-204ENST00000493583 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
TFE3-204ENST00000493583 RICTORQ6R327 1708 aa16.65■□□□□ 0.26
TFE3-204ENST00000493583 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
TFE3-204ENST00000493583 AP5Z1O43299 807 aa16.65■□□□□ 0.26
TFE3-204ENST00000493583 ZNF500O60304 480 aaPredicted RBP16.65■□□□□ 0.26
TFE3-204ENST00000493583 CEBPZQ03701 1054 aaKnown RBP16.65■□□□□ 0.26
TFE3-204ENST00000493583 GNAI2P04899 355 aa16.65■□□□□ 0.26
TFE3-204ENST00000493583 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
TFE3-204ENST00000493583 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
TFE3-204ENST00000493583 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 PYCARDQ9ULZ3 195 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 ATP10DQ9P241 1426 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 MCCP23508 829 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 SASS6Q6UVJ0 657 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 ZC3H13Q5T200 1668 aaKnown RBP16.64■□□□□ 0.25
TFE3-204ENST00000493583 VGLL3A8MV65 326 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 ZNF592Q92610 1267 aa16.64■□□□□ 0.25
TFE3-204ENST00000493583 MAP3K19Q56UN5 1328 aa16.63■□□□□ 0.25
TFE3-204ENST00000493583 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
TFE3-204ENST00000493583 CASTP20810 708 aaKnown RBP16.63■□□□□ 0.25
TFE3-204ENST00000493583 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
TFE3-204ENST00000493583 SETBP1Q9Y6X0 1596 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms