RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TOGARAM1Q9Y4F4 1720 aa10.71□□□□□ -0.69
TM4SF1-204ENST00000493348 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 NFE2L2Q16236 605 aa10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 TXNRD1Q16881 649 aa10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 SLC27A3Q5K4L6 730 aa10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 PIGBQ92521 554 aa10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 CAMKK2Q96RR4 588 aa10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 ADAMTS8Q9UP79 889 aa10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
TM4SF1-204ENST00000493348 PALLDQ8WX93 1383 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 RIPK4P57078 832 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 PTF1AQ7RTS3 328 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 NFATC2IPQ8NCF5 419 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 SLC52A2Q9HAB3 445 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 STK32BQ9NY57 414 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 RREB1Q92766 1687 aa10.69□□□□□ -0.7
TM4SF1-204ENST00000493348 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
TM4SF1-204ENST00000493348 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
TM4SF1-204ENST00000493348 LY75O60449 1722 aa10.67□□□□□ -0.7
TM4SF1-204ENST00000493348 CAPN15O75808 1086 aa10.67□□□□□ -0.7
TM4SF1-204ENST00000493348 MCM10Q7L590 875 aa10.67□□□□□ -0.7
TM4SF1-204ENST00000493348 PLEKHF1Q96S99 279 aa10.67□□□□□ -0.7
TM4SF1-204ENST00000493348 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
TM4SF1-204ENST00000493348 BTBD11A6QL63 1104 aa10.66□□□□□ -0.7
TM4SF1-204ENST00000493348 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
TM4SF1-204ENST00000493348 POTEHQ6S545 545 aa10.66□□□□□ -0.7
TM4SF1-204ENST00000493348 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
TM4SF1-204ENST00000493348 ASAP1Q9ULH1 1129 aa10.66□□□□□ -0.7
TM4SF1-204ENST00000493348 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 PTCD1O75127 700 aaKnown RBP10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 AK7Q96M32 723 aa10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 ATG3Q9NT62 314 aa10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 RRP7AQ9Y3A4 280 aaKnown RBP10.65□□□□□ -0.7
TM4SF1-204ENST00000493348 C5P01031 1676 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 MRC1P22897 1456 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 LOC102724428A0A0B4J2F2 783 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 DSG3P32926 999 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 SIK1P57059 783 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 DCTN1Q14203 1278 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 NPM2Q86SE8 214 aaKnown RBP10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 TFCP2L1Q9NZI6 479 aa10.64□□□□□ -0.71
TM4SF1-204ENST00000493348 ADAMTS7Q9UKP4 1686 aa10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 SIPA1L3O60292 1781 aaPredicted RBP10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 APAF1O14727 1248 aa10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 R3HDM1Q15032 1099 aaKnown RBP10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 FMNL2Q96PY5 1086 aa10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 CEMIPQ8WUJ3 1361 aa10.63□□□□□ -0.71
TM4SF1-204ENST00000493348 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-204ENST00000493348 SLC15A2Q16348 729 aa10.62□□□□□ -0.71
TM4SF1-204ENST00000493348 ZNF790Q6PG37 636 aa10.62□□□□□ -0.71
TM4SF1-204ENST00000493348 PROM2Q8N271 834 aa10.62□□□□□ -0.71
TM4SF1-204ENST00000493348 TEX13AQ9BXU3 409 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-204ENST00000493348 STARD3NLO95772 234 aa10.61□□□□□ -0.71
TM4SF1-204ENST00000493348 KCNQ4P56696 695 aa10.61□□□□□ -0.71
TM4SF1-204ENST00000493348 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
TM4SF1-204ENST00000493348 LRRC4BQ9NT99 713 aa10.61□□□□□ -0.71
TM4SF1-204ENST00000493348 TSPYL4Q9UJ04 414 aa10.61□□□□□ -0.71
TM4SF1-204ENST00000493348 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
TM4SF1-204ENST00000493348 PAPPAQ13219 1627 aa10.6□□□□□ -0.71
TM4SF1-204ENST00000493348 VSIG10Q8N0Z9 540 aa10.6□□□□□ -0.71
TM4SF1-204ENST00000493348 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
TM4SF1-204ENST00000493348 C4BP0C0L5 1744 aa10.6□□□□□ -0.71
TM4SF1-204ENST00000493348 GNPATO15228 680 aa10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 MIER1Q8N108 512 aa10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 THUMPD2Q9BTF0 503 aaKnown RBP10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 BABAM1Q9NWV8 329 aa10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 UBR2Q8IWV8 1755 aa10.59□□□□□ -0.71
TM4SF1-204ENST00000493348 PHF14O94880 888 aa10.58□□□□□ -0.72
TM4SF1-204ENST00000493348 GNAI1P63096 354 aa10.58□□□□□ -0.72
TM4SF1-204ENST00000493348 ANO8Q9HCE9 1232 aaPredicted RBP10.58□□□□□ -0.72
TM4SF1-204ENST00000493348 MIS18AQ9NYP9 233 aa10.58□□□□□ -0.72
TM4SF1-204ENST00000493348 QSER1Q2KHR3 1735 aa10.58□□□□□ -0.72
TM4SF1-204ENST00000493348 HEG1Q9ULI3 1381 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 SNRPA1P09661 255 aaKnown RBP10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 ZNF827Q17R98 1081 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 DNAJC10Q8IXB1 793 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 LINC00116Q8NCU8 138 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 ZNF496Q96IT1 587 aaPredicted RBP10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 KDM3BQ7LBC6 1761 aa10.57□□□□□ -0.72
TM4SF1-204ENST00000493348 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms