RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PATL2C9JE40 543 aaKnown RBP7.08□□□□□ -1.28
CLK1-213ENST00000492793 RGS20O76081 388 aa7.08□□□□□ -1.28
CLK1-213ENST00000492793 PTGIRP43119 386 aa7.08□□□□□ -1.28
CLK1-213ENST00000492793 KCNA1Q09470 495 aa7.08□□□□□ -1.28
CLK1-213ENST00000492793 TLR1Q15399 786 aa7.08□□□□□ -1.28
CLK1-213ENST00000492793 CNKSR1Q969H4 720 aa7.08□□□□□ -1.28
CLK1-213ENST00000492793 M0R2N6 131 aa7.07□□□□□ -1.28
CLK1-213ENST00000492793 GTF2E1P29083 439 aaPredicted RBP7.07□□□□□ -1.28
CLK1-213ENST00000492793 GAS2L2Q8NHY3 880 aa7.07□□□□□ -1.28
CLK1-213ENST00000492793 SCG3Q8WXD2 468 aaKnown RBP7.07□□□□□ -1.28
CLK1-213ENST00000492793 VTI1AQ96AJ9 217 aa7.07□□□□□ -1.28
CLK1-213ENST00000492793 MKNK1Q9BUB5 465 aa7.07□□□□□ -1.28
CLK1-213ENST00000492793 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
CLK1-213ENST00000492793 GZF1Q9H116 711 aaPredicted RBP7.07□□□□□ -1.28
CLK1-213ENST00000492793 GFRA3O60609 400 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 IL2RAP01589 272 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 PKDCCQ504Y2 493 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 TBCELQ5QJ74 424 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 C6orf118Q5T5N4 469 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 Q6ZVU0 165 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 ESYT1Q9BSJ8 1104 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 SLAIN2Q9P270 581 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
CLK1-213ENST00000492793 A6NJY4 79 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 PPP1R12BO60237 982 aaPredicted RBP7.05□□□□□ -1.28
CLK1-213ENST00000492793 BMP2P12643 396 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 SSFA2P28290 1259 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 SMTNP53814 917 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 CLN3Q13286 438 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 SLC27A3Q5K4L6 730 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 MEIOBQ8N635 442 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 CCER1Q8TC90 406 aaPredicted RBP7.05□□□□□ -1.28
CLK1-213ENST00000492793 XAGE2Q96GT9 111 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 TSEN34Q9BSV6 310 aaKnown RBP7.05□□□□□ -1.28
CLK1-213ENST00000492793 TSPAN10Q9H1Z9 355 aaPredicted RBP7.05□□□□□ -1.28
CLK1-213ENST00000492793 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
CLK1-213ENST00000492793 CXXC1Q9P0U4 656 aaPredicted RBP7.05□□□□□ -1.28
CLK1-213ENST00000492793 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
CLK1-213ENST00000492793 WASLO00401 505 aaPredicted RBP7.04□□□□□ -1.28
CLK1-213ENST00000492793 ARID4AP29374 1257 aaPredicted RBP7.04□□□□□ -1.28
CLK1-213ENST00000492793 SCNN1AP37088 669 aa7.04□□□□□ -1.28
CLK1-213ENST00000492793 TMEM214Q6NUQ4 689 aaKnown RBP7.04□□□□□ -1.28
CLK1-213ENST00000492793 ZSCAN10Q96SZ4 725 aaPredicted RBP7.04□□□□□ -1.28
CLK1-213ENST00000492793 ATAD2Q6PL18 1390 aa7.04□□□□□ -1.28
CLK1-213ENST00000492793 ABL1P00519 1130 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 CENPCQ03188 943 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 KDF1Q8NAX2 398 aaPredicted RBP7.03□□□□□ -1.28
CLK1-213ENST00000492793 SLC4A9Q96Q91 983 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 INSM2Q96T92 566 aaPredicted RBP7.03□□□□□ -1.28
CLK1-213ENST00000492793 CABP1Q9NZU7 370 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 ZNF232Q9UNY5 417 aa7.03□□□□□ -1.28
CLK1-213ENST00000492793 IGFBP4P22692 258 aa7.02□□□□□ -1.29
CLK1-213ENST00000492793 WEE1P30291 646 aa7.02□□□□□ -1.29
CLK1-213ENST00000492793 SCARF1Q14162 830 aa7.02□□□□□ -1.29
CLK1-213ENST00000492793 PHLDB3Q6NSJ2 640 aa7.02□□□□□ -1.29
CLK1-213ENST00000492793 SCHIP1Q9P0W5 487 aaPredicted RBP7.02□□□□□ -1.29
CLK1-213ENST00000492793 FKBP5Q13451 457 aaPredicted RBP7.01□□□□□ -1.29
CLK1-213ENST00000492793 NAA30Q147X3 362 aaPredicted RBP7.01□□□□□ -1.29
CLK1-213ENST00000492793 OCLNQ16625 522 aa7.01□□□□□ -1.29
CLK1-213ENST00000492793 NBPF15Q8N660 670 aa7.01□□□□□ -1.29
CLK1-213ENST00000492793 PURBQ96QR8 312 aaKnown RBP7.01□□□□□ -1.29
CLK1-213ENST00000492793 CDK2AP1O14519 115 aa7□□□□□ -1.29
CLK1-213ENST00000492793 AXIN1O15169 862 aa7□□□□□ -1.29
CLK1-213ENST00000492793 FOXO3O43524 673 aa7□□□□□ -1.29
CLK1-213ENST00000492793 BMP1P13497 986 aa7□□□□□ -1.29
CLK1-213ENST00000492793 SERPINB4P48594 390 aa7□□□□□ -1.29
CLK1-213ENST00000492793 EPHA4P54764 986 aa7□□□□□ -1.29
CLK1-213ENST00000492793 PSMA6P60900 246 aaKnown RBP7□□□□□ -1.29
CLK1-213ENST00000492793 GNASQ5JWF2 1037 aa7□□□□□ -1.29
CLK1-213ENST00000492793 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
CLK1-213ENST00000492793 NGLY1Q96IV0 654 aa7□□□□□ -1.29
CLK1-213ENST00000492793 ANO2Q9NQ90 1003 aa7□□□□□ -1.29
CLK1-213ENST00000492793 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7□□□□□ -1.293e-7■■■■■ 35.5
CLK1-213ENST00000492793 PARP3Q9Y6F1 533 aa7□□□□□ -1.29
CLK1-213ENST00000492793 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
CLK1-213ENST00000492793 SPINT1O43278 529 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 PTCD1O75127 700 aaKnown RBP6.99□□□□□ -1.29
CLK1-213ENST00000492793 DGAT1O75907 488 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 CTSOP43234 321 aaPredicted RBP6.99□□□□□ -1.29
CLK1-213ENST00000492793 MTFR1Q15390 333 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 TMCO4Q5TGY1 634 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 PRICKLE2Q7Z3G6 844 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
CLK1-213ENST00000492793 SERTM1A2A2V5 107 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 C21orf2O43822 256 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 PHKA2P46019 1235 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 FOXK2Q01167 660 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 CTC1Q2NKJ3 1217 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 CAPN12Q6ZSI9 719 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 TXNDC2Q86VQ3 553 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 C1orf216Q8TAB5 229 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 AIDAQ96BJ3 306 aa6.98□□□□□ -1.29
CLK1-213ENST00000492793 NIFKQ9BYG3 293 aaKnown RBP6.98□□□□□ -1.29
CLK1-213ENST00000492793 FHDC1Q9C0D6 1143 aaPredicted RBP6.98□□□□□ -1.29
CLK1-213ENST00000492793 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
CLK1-213ENST00000492793 FIGNL2A6NMB9 653 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms