RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 SLC52A2Q9HAB3 445 aa20.95■□□□□ 0.94
COPS3-210ENST00000492672 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
COPS3-210ENST00000492672 KCNQ4P56696 695 aa20.94■□□□□ 0.94
COPS3-210ENST00000492672 PROM2Q8N271 834 aa20.94■□□□□ 0.94
COPS3-210ENST00000492672 MRC1P22897 1456 aa20.94■□□□□ 0.94
COPS3-210ENST00000492672 SLC39A6Q13433 755 aa20.93■□□□□ 0.94
COPS3-210ENST00000492672 SF3B2Q13435 895 aaKnown RBP20.93■□□□□ 0.94
COPS3-210ENST00000492672 CCDC125Q86Z20 511 aa20.93■□□□□ 0.94
COPS3-210ENST00000492672 RTF1Q92541 710 aaKnown RBP20.93■□□□□ 0.94
COPS3-210ENST00000492672 CAMKK2Q96RR4 588 aa20.93■□□□□ 0.94
COPS3-210ENST00000492672 ATG3Q9NT62 314 aa20.93■□□□□ 0.94
COPS3-210ENST00000492672 MIS18AQ9NYP9 233 aa20.93■□□□□ 0.94
COPS3-210ENST00000492672 LY75O60449 1722 aa20.92■□□□□ 0.94
COPS3-210ENST00000492672 KCNQ3O43525 872 aa20.92■□□□□ 0.94
COPS3-210ENST00000492672 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
COPS3-210ENST00000492672 TEFQ10587 303 aa20.9■□□□□ 0.94
COPS3-210ENST00000492672 PAPPAQ13219 1627 aa20.89■□□□□ 0.94
COPS3-210ENST00000492672 PLSCR1O15162 318 aa20.89■□□□□ 0.93
COPS3-210ENST00000492672 BAG6P46379 1132 aa20.89■□□□□ 0.93
COPS3-210ENST00000492672 SLC4A9Q96Q91 983 aa20.88■□□□□ 0.93
COPS3-210ENST00000492672 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
COPS3-210ENST00000492672 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
COPS3-210ENST00000492672 RREB1Q92766 1687 aa20.87■□□□□ 0.93
COPS3-210ENST00000492672 TXNRD1Q16881 649 aa20.87■□□□□ 0.93
COPS3-210ENST00000492672 RGPD3A6NKT7 1758 aaPredicted RBP20.87■□□□□ 0.93
COPS3-210ENST00000492672 RGPD4Q7Z3J3 1758 aa20.87■□□□□ 0.93
COPS3-210ENST00000492672 TAF1LQ8IZX4 1826 aa20.86■□□□□ 0.93
COPS3-210ENST00000492672 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
COPS3-210ENST00000492672 UBR2Q8IWV8 1755 aa20.86■□□□□ 0.93
COPS3-210ENST00000492672 NUP188Q5SRE5 1749 aa20.86■□□□□ 0.93
COPS3-210ENST00000492672 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
COPS3-210ENST00000492672 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
COPS3-210ENST00000492672 PTCD1O75127 700 aaKnown RBP20.85■□□□□ 0.93
COPS3-210ENST00000492672 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
COPS3-210ENST00000492672 WWC1Q8IX03 1113 aa20.84■□□□□ 0.93
COPS3-210ENST00000492672 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
COPS3-210ENST00000492672 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.93
COPS3-210ENST00000492672 SMARCC1Q92922 1105 aaPredicted RBP20.83■□□□□ 0.93
COPS3-210ENST00000492672 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.93
COPS3-210ENST00000492672 ITPK1Q13572 414 aa20.82■□□□□ 0.92
COPS3-210ENST00000492672 ZNF790Q6PG37 636 aa20.82■□□□□ 0.92
COPS3-210ENST00000492672 TJP1Q07157 1748 aa20.81■□□□□ 0.92
COPS3-210ENST00000492672 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
COPS3-210ENST00000492672 SIK1P57059 783 aa20.81■□□□□ 0.92
COPS3-210ENST00000492672 ZNF496Q96IT1 587 aaPredicted RBP20.81■□□□□ 0.92
COPS3-210ENST00000492672 CCNL1Q9UK58 526 aaPredicted RBP20.81■□□□□ 0.92
COPS3-210ENST00000492672 MYH14Q7Z406 1995 aaKnown RBP20.8■□□□□ 0.92
COPS3-210ENST00000492672 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
COPS3-210ENST00000492672 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
COPS3-210ENST00000492672 C5P01031 1676 aa20.8■□□□□ 0.92
COPS3-210ENST00000492672 PRAMEF22A3QJZ6 481 aa20.79■□□□□ 0.92
COPS3-210ENST00000492672 ATP6V1AP38606 617 aa20.79■□□□□ 0.92
COPS3-210ENST00000492672 CHL1O00533 1208 aa20.78■□□□□ 0.92
COPS3-210ENST00000492672 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
COPS3-210ENST00000492672 COL5A3P25940 1745 aaPredicted RBP20.78■□□□□ 0.92
COPS3-210ENST00000492672 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 ZNF853P0CG23 659 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 KRT24Q2M2I5 525 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 SMIM5Q71RC9 77 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 TTC5Q8N0Z6 440 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 LINC00116Q8NCU8 138 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 TSPYL4Q9UJ04 414 aa20.77■□□□□ 0.92
COPS3-210ENST00000492672 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
COPS3-210ENST00000492672 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
COPS3-210ENST00000492672 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
COPS3-210ENST00000492672 ZNF827Q17R98 1081 aa20.75■□□□□ 0.91
COPS3-210ENST00000492672 NCBP3Q53F19 620 aaKnown RBP20.75■□□□□ 0.91
COPS3-210ENST00000492672 SLC27A3Q5K4L6 730 aa20.75■□□□□ 0.91
COPS3-210ENST00000492672 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
COPS3-210ENST00000492672 MBIPQ9NS73 344 aa20.75■□□□□ 0.91
COPS3-210ENST00000492672 HNRNPUQ00839 825 aaKnown RBP eCLIP20.74■□□□□ 0.91
COPS3-210ENST00000492672 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
COPS3-210ENST00000492672 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
COPS3-210ENST00000492672 C4BP0C0L5 1744 aa20.73■□□□□ 0.91
COPS3-210ENST00000492672 AMIGO3Q86WK7 504 aa20.73■□□□□ 0.91
COPS3-210ENST00000492672 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
COPS3-210ENST00000492672 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
COPS3-210ENST00000492672 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
COPS3-210ENST00000492672 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
COPS3-210ENST00000492672 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
COPS3-210ENST00000492672 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
COPS3-210ENST00000492672 GNAI1P63096 354 aa20.71■□□□□ 0.91
COPS3-210ENST00000492672 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
COPS3-210ENST00000492672 UBR3Q6ZT12 1888 aa20.71■□□□□ 0.91
COPS3-210ENST00000492672 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
COPS3-210ENST00000492672 PSDA5PKW4 1024 aaPredicted RBP20.69■□□□□ 0.9
COPS3-210ENST00000492672 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
COPS3-210ENST00000492672 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
COPS3-210ENST00000492672 PDGFDQ9GZP0 370 aaPredicted RBP20.69■□□□□ 0.9
COPS3-210ENST00000492672 ELL2O00472 640 aaPredicted RBP20.68■□□□□ 0.9
COPS3-210ENST00000492672 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
COPS3-210ENST00000492672 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
COPS3-210ENST00000492672 R3HDM1Q15032 1099 aaKnown RBP20.68■□□□□ 0.9
COPS3-210ENST00000492672 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
COPS3-210ENST00000492672 INTS5Q6P9B9 1019 aaKnown RBP20.68■□□□□ 0.9
COPS3-210ENST00000492672 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
COPS3-210ENST00000492672 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
COPS3-210ENST00000492672 C8orf58Q8NAV2 365 aa20.68■□□□□ 0.9
COPS3-210ENST00000492672 IL16Q14005 1332 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms