RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 LOC102724428A0A0B4J2F2 783 aa15.05■□□□□ -0
TMEM39A-211ENST00000491685 PHF14O94880 888 aa15.05■□□□□ -0
TMEM39A-211ENST00000491685 SIK1P57059 783 aa15.05■□□□□ -0
TMEM39A-211ENST00000491685 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
TMEM39A-211ENST00000491685 AK7Q96M32 723 aa15.05■□□□□ -0
TMEM39A-211ENST00000491685 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
TMEM39A-211ENST00000491685 TJP1Q07157 1748 aa15.05■□□□□ -0
TMEM39A-211ENST00000491685 KIAA1551Q9HCM1 1747 aa15.04■□□□□ -0
TMEM39A-211ENST00000491685 PLEKHG2Q9H7P9 1386 aa15.04■□□□□ -0
TMEM39A-211ENST00000491685 ATG3Q9NT62 314 aa15.04■□□□□ -0
TMEM39A-211ENST00000491685 MYH14Q7Z406 1995 aaKnown RBP15.04■□□□□ -0
TMEM39A-211ENST00000491685 YBX3P16989 372 aaKnown RBP eCLIP15.03■□□□□ -0
TMEM39A-211ENST00000491685 MORC1Q86VD1 984 aa15.03■□□□□ -0
TMEM39A-211ENST00000491685 KIF13BQ9NQT8 1826 aa15.02■□□□□ -0
TMEM39A-211ENST00000491685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.02■□□□□ -0
TMEM39A-211ENST00000491685 GRIN3BO60391 1043 aa15.02■□□□□ -0
TMEM39A-211ENST00000491685 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
TMEM39A-211ENST00000491685 SLC4A9Q96Q91 983 aa15.02■□□□□ -0
TMEM39A-211ENST00000491685 CICQ96RK0 1608 aaPredicted RBP15.02□□□□□ -0.01
TMEM39A-211ENST00000491685 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
TMEM39A-211ENST00000491685 ATP6V1AP38606 617 aa15□□□□□ -0.01
TMEM39A-211ENST00000491685 ZNF530Q6P9A1 599 aaPredicted RBP15□□□□□ -0.01
TMEM39A-211ENST00000491685 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
TMEM39A-211ENST00000491685 N4BP2Q86UW6 1770 aaPredicted RBP15□□□□□ -0.01
TMEM39A-211ENST00000491685 GNPATO15228 680 aa14.99□□□□□ -0.01
TMEM39A-211ENST00000491685 IL13P35225 146 aa14.99□□□□□ -0.01
TMEM39A-211ENST00000491685 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
TMEM39A-211ENST00000491685 ADAMTS7Q9UKP4 1686 aa14.99□□□□□ -0.01
TMEM39A-211ENST00000491685 ADCY9O60503 1353 aa14.98□□□□□ -0.01
TMEM39A-211ENST00000491685 SSFA2P28290 1259 aa14.98□□□□□ -0.01
TMEM39A-211ENST00000491685 PLEKHO1Q53GL0 409 aaPredicted RBP14.98□□□□□ -0.01
TMEM39A-211ENST00000491685 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
TMEM39A-211ENST00000491685 ERVV-2B6SEH9 535 aa14.97□□□□□ -0.01
TMEM39A-211ENST00000491685 DCAF5Q96JK2 942 aa14.97□□□□□ -0.01
TMEM39A-211ENST00000491685 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
TMEM39A-211ENST00000491685 HSPA6P17066 643 aa14.96□□□□□ -0.01
TMEM39A-211ENST00000491685 BRCA1P38398 1863 aaKnown RBP14.96□□□□□ -0.01
TMEM39A-211ENST00000491685 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
TMEM39A-211ENST00000491685 CD2APQ9Y5K6 639 aa14.96□□□□□ -0.01
TMEM39A-211ENST00000491685 MRC1P22897 1456 aa14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 HSP90AB1P08238 724 aaKnown RBP14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 AMOTQ4VCS5 1084 aa14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 GPBP1L1Q9HC44 474 aaPredicted RBP14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 WWC3Q9ULE0 1092 aa14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 UBR2Q8IWV8 1755 aa14.95□□□□□ -0.02
TMEM39A-211ENST00000491685 MTHFSP49914 203 aa14.94□□□□□ -0.02
TMEM39A-211ENST00000491685 CABP4P57796 275 aa14.94□□□□□ -0.02
TMEM39A-211ENST00000491685 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
TMEM39A-211ENST00000491685 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
TMEM39A-211ENST00000491685 PXDNLA1KZ92 1463 aa14.93□□□□□ -0.02
TMEM39A-211ENST00000491685 SIPA1L3O60292 1781 aaPredicted RBP14.93□□□□□ -0.02
TMEM39A-211ENST00000491685 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
TMEM39A-211ENST00000491685 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
TMEM39A-211ENST00000491685 HMOX1P09601 288 aa14.92□□□□□ -0.02
TMEM39A-211ENST00000491685 NFATC2IPQ8NCF5 419 aa14.92□□□□□ -0.02
TMEM39A-211ENST00000491685 C10orf71Q711Q0 1435 aa14.92□□□□□ -0.02
TMEM39A-211ENST00000491685 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
TMEM39A-211ENST00000491685 MMP10P09238 476 aa14.91□□□□□ -0.02
TMEM39A-211ENST00000491685 RTCBQ9Y3I0 505 aaKnown RBP14.91□□□□□ -0.02
TMEM39A-211ENST00000491685 CNGB1Q14028 1251 aaPredicted RBP14.9□□□□□ -0.02
TMEM39A-211ENST00000491685 ARHGEF1Q92888 912 aaKnown RBP14.9□□□□□ -0.02
TMEM39A-211ENST00000491685 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
TMEM39A-211ENST00000491685 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
TMEM39A-211ENST00000491685 RPS6KA4O75676 772 aa14.89□□□□□ -0.03
TMEM39A-211ENST00000491685 AKAP4Q5JQC9 854 aa14.89□□□□□ -0.03
TMEM39A-211ENST00000491685 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
TMEM39A-211ENST00000491685 RC3H1Q5TC82 1133 aaKnown RBP14.89□□□□□ -0.03
TMEM39A-211ENST00000491685 AFDNP55196 1824 aaKnown RBP14.88□□□□□ -0.03
TMEM39A-211ENST00000491685 GYS1P13807 737 aa14.88□□□□□ -0.03
TMEM39A-211ENST00000491685 CRKLP46109 303 aaKnown RBP14.88□□□□□ -0.03
TMEM39A-211ENST00000491685 MTHFSDQ2M296 383 aaKnown RBP14.88□□□□□ -0.03
TMEM39A-211ENST00000491685 ARFGEF1Q9Y6D6 1849 aa14.87□□□□□ -0.03
TMEM39A-211ENST00000491685 DIAPH1O60610 1272 aaKnown RBP14.87□□□□□ -0.03
TMEM39A-211ENST00000491685 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
TMEM39A-211ENST00000491685 SRP68Q9UHB9 627 aaKnown RBP14.87□□□□□ -0.03
TMEM39A-211ENST00000491685 NPC1L1Q9UHC9 1359 aa14.86□□□□□ -0.03
TMEM39A-211ENST00000491685 RNMTO43148 476 aaKnown RBP14.86□□□□□ -0.03
TMEM39A-211ENST00000491685 ADRA2BP18089 450 aa14.86□□□□□ -0.03
TMEM39A-211ENST00000491685 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
TMEM39A-211ENST00000491685 DNAJC10Q8IXB1 793 aa14.86□□□□□ -0.03
TMEM39A-211ENST00000491685 ZNF526Q8TF50 670 aaPredicted RBP14.86□□□□□ -0.03
TMEM39A-211ENST00000491685 RFC4P35249 363 aa14.85□□□□□ -0.03
TMEM39A-211ENST00000491685 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
TMEM39A-211ENST00000491685 WDR90Q96KV7 1748 aa14.85□□□□□ -0.03
TMEM39A-211ENST00000491685 USP42Q9H9J4 1324 aaKnown RBP14.85□□□□□ -0.03
TMEM39A-211ENST00000491685 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
TMEM39A-211ENST00000491685 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
TMEM39A-211ENST00000491685 A0A0G2JLW4 131 aa14.83□□□□□ -0.04
TMEM39A-211ENST00000491685 KIF3CO14782 793 aa14.83□□□□□ -0.04
TMEM39A-211ENST00000491685 DDR1Q08345 913 aa14.83□□□□□ -0.04
TMEM39A-211ENST00000491685 FKBP8Q14318 412 aa14.83□□□□□ -0.04
TMEM39A-211ENST00000491685 SCN7AQ01118 1682 aa14.83□□□□□ -0.04
TMEM39A-211ENST00000491685 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.04
TMEM39A-211ENST00000491685 APLP1P51693 650 aa14.82□□□□□ -0.04
TMEM39A-211ENST00000491685 SOS1Q07889 1333 aaPredicted RBP14.82□□□□□ -0.04
TMEM39A-211ENST00000491685 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
TMEM39A-211ENST00000491685 CYP19A1P11511 503 aaPredicted RBP14.81□□□□□ -0.04
TMEM39A-211ENST00000491685 DPEP1P16444 411 aa14.81□□□□□ -0.04
TMEM39A-211ENST00000491685 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms