RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 CYP27B1O15528 508 aa15.78■□□□□ 0.12
PTPN7-214ENST00000491584 SLC27A3Q5K4L6 730 aa15.78■□□□□ 0.12
PTPN7-214ENST00000491584 COL3A1P02461 1466 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-214ENST00000491584 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
PTPN7-214ENST00000491584 ERVV-2B6SEH9 535 aa15.77■□□□□ 0.12
PTPN7-214ENST00000491584 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.12
PTPN7-214ENST00000491584 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
PTPN7-214ENST00000491584 ZNF784Q8NCA9 323 aaPredicted RBP15.77■□□□□ 0.12
PTPN7-214ENST00000491584 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
PTPN7-214ENST00000491584 HTATSF1O43719 755 aaKnown RBP15.76■□□□□ 0.11
PTPN7-214ENST00000491584 KCNQ4P56696 695 aa15.76■□□□□ 0.11
PTPN7-214ENST00000491584 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
PTPN7-214ENST00000491584 ADAMTS8Q9UP79 889 aa15.76■□□□□ 0.11
PTPN7-214ENST00000491584 CHD4Q14839 1912 aa15.76■□□□□ 0.11
PTPN7-214ENST00000491584 CABP4P57796 275 aa15.75■□□□□ 0.11
PTPN7-214ENST00000491584 TMOD3Q9NYL9 352 aa15.75■□□□□ 0.11
PTPN7-214ENST00000491584 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
PTPN7-214ENST00000491584 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
PTPN7-214ENST00000491584 SLC16A10Q8TF71 515 aa15.74■□□□□ 0.11
PTPN7-214ENST00000491584 SMARCC1Q92922 1105 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-214ENST00000491584 PHACTR3Q96KR7 559 aa15.74■□□□□ 0.11
PTPN7-214ENST00000491584 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
PTPN7-214ENST00000491584 PNISRQ8TF01 805 aaKnown RBP15.73■□□□□ 0.11
PTPN7-214ENST00000491584 TEFQ10587 303 aa15.72■□□□□ 0.11
PTPN7-214ENST00000491584 NFE2L2Q16236 605 aa15.72■□□□□ 0.11
PTPN7-214ENST00000491584 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
PTPN7-214ENST00000491584 C5P01031 1676 aa15.72■□□□□ 0.11
PTPN7-214ENST00000491584 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.11
PTPN7-214ENST00000491584 RNMTO43148 476 aaKnown RBP15.7■□□□□ 0.1
PTPN7-214ENST00000491584 RIPK4P57078 832 aa15.7■□□□□ 0.1
PTPN7-214ENST00000491584 TAF1LQ8IZX4 1826 aa15.7■□□□□ 0.1
PTPN7-214ENST00000491584 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
PTPN7-214ENST00000491584 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
PTPN7-214ENST00000491584 CEP350Q5VT06 3117 aa15.69■□□□□ 0.1
PTPN7-214ENST00000491584 CALD1Q05682 793 aaKnown RBP15.68■□□□□ 0.1
PTPN7-214ENST00000491584 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
PTPN7-214ENST00000491584 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
PTPN7-214ENST00000491584 NGEFQ8N5V2 710 aa15.68■□□□□ 0.1
PTPN7-214ENST00000491584 NFATC2IPQ8NCF5 419 aa15.68■□□□□ 0.1
PTPN7-214ENST00000491584 PIGBQ92521 554 aa15.68■□□□□ 0.1
PTPN7-214ENST00000491584 TFCP2L1Q9NZI6 479 aa15.68■□□□□ 0.1
PTPN7-214ENST00000491584 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-214ENST00000491584 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
PTPN7-214ENST00000491584 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-214ENST00000491584 MIER1Q8N108 512 aa15.67■□□□□ 0.1
PTPN7-214ENST00000491584 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
PTPN7-214ENST00000491584 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
PTPN7-214ENST00000491584 ITGB4P16144 1822 aa15.66■□□□□ 0.1
PTPN7-214ENST00000491584 NEUROD2Q15784 382 aa15.66■□□□□ 0.1
PTPN7-214ENST00000491584 IL17REQ8NFR9 667 aa15.66■□□□□ 0.1
PTPN7-214ENST00000491584 POLD1P28340 1107 aa15.65■□□□□ 0.1
PTPN7-214ENST00000491584 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
PTPN7-214ENST00000491584 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
PTPN7-214ENST00000491584 APAF1O14727 1248 aa15.64■□□□□ 0.09
PTPN7-214ENST00000491584 TAF7Q15545 349 aaPredicted RBP15.64■□□□□ 0.09
PTPN7-214ENST00000491584 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
PTPN7-214ENST00000491584 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
PTPN7-214ENST00000491584 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
PTPN7-214ENST00000491584 YBX3P16989 372 aaKnown RBP eCLIP15.63■□□□□ 0.093e-8■□□□□ 10.5
PTPN7-214ENST00000491584 MCM10Q7L590 875 aa15.63■□□□□ 0.09
PTPN7-214ENST00000491584 UBR3Q6ZT12 1888 aa15.63■□□□□ 0.09
PTPN7-214ENST00000491584 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
PTPN7-214ENST00000491584 GPR162Q16538 588 aa15.62■□□□□ 0.09
PTPN7-214ENST00000491584 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
PTPN7-214ENST00000491584 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
PTPN7-214ENST00000491584 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
PTPN7-214ENST00000491584 ATG3Q9NT62 314 aa15.61■□□□□ 0.09
PTPN7-214ENST00000491584 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
PTPN7-214ENST00000491584 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
PTPN7-214ENST00000491584 RRP7AQ9Y3A4 280 aaKnown RBP15.61■□□□□ 0.09
PTPN7-214ENST00000491584 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
PTPN7-214ENST00000491584 LOC102724428A0A0B4J2F2 783 aa15.59■□□□□ 0.09
PTPN7-214ENST00000491584 SIK1P57059 783 aa15.59■□□□□ 0.09
PTPN7-214ENST00000491584 DCTN1Q14203 1278 aa15.59■□□□□ 0.09
PTPN7-214ENST00000491584 MSL1Q68DK7 614 aa15.59■□□□□ 0.09
PTPN7-214ENST00000491584 CEMIPQ8WUJ3 1361 aa15.59■□□□□ 0.09
PTPN7-214ENST00000491584 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
PTPN7-214ENST00000491584 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
PTPN7-214ENST00000491584 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
PTPN7-214ENST00000491584 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
PTPN7-214ENST00000491584 CCDC27Q2M243 656 aa15.58■□□□□ 0.08
PTPN7-214ENST00000491584 ZNF790Q6PG37 636 aa15.58■□□□□ 0.08
PTPN7-214ENST00000491584 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
PTPN7-214ENST00000491584 FMNL2Q96PY5 1086 aa15.58■□□□□ 0.08
PTPN7-214ENST00000491584 VSIG10Q8N0Z9 540 aa15.57■□□□□ 0.08
PTPN7-214ENST00000491584 CHMP4AQ9BY43 222 aa15.57■□□□□ 0.08
PTPN7-214ENST00000491584 STARD3NLO95772 234 aa15.56■□□□□ 0.08
PTPN7-214ENST00000491584 GNAI1P63096 354 aa15.56■□□□□ 0.08
PTPN7-214ENST00000491584 SMIM5Q71RC9 77 aa15.56■□□□□ 0.08
PTPN7-214ENST00000491584 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
PTPN7-214ENST00000491584 ADCY9O60503 1353 aa15.55■□□□□ 0.08
PTPN7-214ENST00000491584 MSH5O43196 834 aa15.55■□□□□ 0.08
PTPN7-214ENST00000491584 SLC39A6Q13433 755 aa15.55■□□□□ 0.08
PTPN7-214ENST00000491584 NPM2Q86SE8 214 aaKnown RBP15.55■□□□□ 0.08
PTPN7-214ENST00000491584 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
PTPN7-214ENST00000491584 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
PTPN7-214ENST00000491584 CD2APQ9Y5K6 639 aa15.55■□□□□ 0.08
PTPN7-214ENST00000491584 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
PTPN7-214ENST00000491584 ZNF831Q5JPB2 1677 aa15.54■□□□□ 0.08
PTPN7-214ENST00000491584 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms