RNA–Protein interactions for RNA: ENST00000491250.1

CDK6-205, Transcript of cyclin dependent kinase 6, humanhuman

TSL 4

Gene CDK6, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-205ENST00000491250 ATP6V1AP38606 617 aa28.34■■■□□ 2.13
CDK6-205ENST00000491250 LINC00116Q8NCU8 138 aa28.34■■■□□ 2.13
CDK6-205ENST00000491250 KDRP35968 1356 aa28.33■■■□□ 2.13
CDK6-205ENST00000491250 KDM6AO15550 1401 aaPredicted RBP28.33■■■□□ 2.13
CDK6-205ENST00000491250 CABP4P57796 275 aa28.31■■■□□ 2.12
CDK6-205ENST00000491250 ITPK1Q13572 414 aa28.31■■■□□ 2.12
CDK6-205ENST00000491250 SMIM5Q71RC9 77 aa28.31■■■□□ 2.12
CDK6-205ENST00000491250 AMIGO3Q86WK7 504 aa28.31■■■□□ 2.12
CDK6-205ENST00000491250 RBM42Q9BTD8 480 aaKnown RBP28.3■■■□□ 2.12
CDK6-205ENST00000491250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.29■■■□□ 2.12
CDK6-205ENST00000491250 GNPATO15228 680 aa28.28■■■□□ 2.12
CDK6-205ENST00000491250 HMOX1P09601 288 aa28.28■■■□□ 2.12
CDK6-205ENST00000491250 UBR3Q6ZT12 1888 aa28.27■■■□□ 2.12
CDK6-205ENST00000491250 SSFA2P28290 1259 aa28.27■■■□□ 2.12
CDK6-205ENST00000491250 GPR162Q16538 588 aa28.27■■■□□ 2.12
CDK6-205ENST00000491250 NLGN2Q8NFZ4 835 aa28.27■■■□□ 2.12
CDK6-205ENST00000491250 NPC1L1Q9UHC9 1359 aa28.26■■■□□ 2.12
CDK6-205ENST00000491250 DIAPH1O60610 1272 aaKnown RBP28.26■■■□□ 2.11
CDK6-205ENST00000491250 PELP1Q8IZL8 1130 aaKnown RBP28.26■■■□□ 2.11
CDK6-205ENST00000491250 SLC4A9Q96Q91 983 aa28.23■■■□□ 2.11
CDK6-205ENST00000491250 AKAP4Q5JQC9 854 aa28.22■■■□□ 2.11
CDK6-205ENST00000491250 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
CDK6-205ENST00000491250 PTCD1O75127 700 aaKnown RBP28.19■■■□□ 2.1
CDK6-205ENST00000491250 RTCBQ9Y3I0 505 aaKnown RBP28.18■■■□□ 2.1
CDK6-205ENST00000491250 U2SURPO15042 1029 aaKnown RBP28.17■■■□□ 2.1
CDK6-205ENST00000491250 SCN11AQ9UI33 1791 aa28.16■■■□□ 2.1
CDK6-205ENST00000491250 ZNF831Q5JPB2 1677 aa28.16■■■□□ 2.1
CDK6-205ENST00000491250 COL3A1P02461 1466 aaPredicted RBP28.16■■■□□ 2.1
CDK6-205ENST00000491250 MTHFSDQ2M296 383 aaKnown RBP28.16■■■□□ 2.1
CDK6-205ENST00000491250 TRAPPC3LQ5T215 181 aa28.15■■■□□ 2.1
CDK6-205ENST00000491250 LGR6Q9HBX8 967 aa28.15■■■□□ 2.1
CDK6-205ENST00000491250 CD2APQ9Y5K6 639 aa28.15■■■□□ 2.1
CDK6-205ENST00000491250 CNTNAP4Q9C0A0 1308 aa28.15■■■□□ 2.1
CDK6-205ENST00000491250 SLC52A2Q9HAB3 445 aa28.14■■■□□ 2.1
CDK6-205ENST00000491250 COL5A3P25940 1745 aaPredicted RBP28.13■■■□□ 2.09
CDK6-205ENST00000491250 RNMTO43148 476 aaKnown RBP28.13■■■□□ 2.09
CDK6-205ENST00000491250 RC3H1Q5TC82 1133 aaKnown RBP28.13■■■□□ 2.09
CDK6-205ENST00000491250 UTRNP46939 3433 aa28.13■■■□□ 2.09
CDK6-205ENST00000491250 CHD4Q14839 1912 aa28.12■■■□□ 2.09
CDK6-205ENST00000491250 RPS6KA4O75676 772 aa28.1■■■□□ 2.09
CDK6-205ENST00000491250 YBX3P16989 372 aaKnown RBP eCLIP28.1■■■□□ 2.09
CDK6-205ENST00000491250 ADRA2BP18089 450 aa28.1■■■□□ 2.09
CDK6-205ENST00000491250 ARHGEF1Q92888 912 aaKnown RBP28.1■■■□□ 2.09
CDK6-205ENST00000491250 CRKLP46109 303 aaKnown RBP28.09■■■□□ 2.09
CDK6-205ENST00000491250 ZNF784Q8NCA9 323 aaPredicted RBP28.09■■■□□ 2.09
CDK6-205ENST00000491250 CFAP53Q96M91 514 aa28.09■■■□□ 2.09
CDK6-205ENST00000491250 MRC1P22897 1456 aa28.08■■■□□ 2.09
CDK6-205ENST00000491250 MMP10P09238 476 aa28.08■■■□□ 2.09
CDK6-205ENST00000491250 RFC4P35249 363 aa28.08■■■□□ 2.09
CDK6-205ENST00000491250 SLC39A6Q13433 755 aa28.07■■■□□ 2.08
CDK6-205ENST00000491250 GRIN3BO60391 1043 aa28.06■■■□□ 2.08
CDK6-205ENST00000491250 TJP1Q07157 1748 aa28.06■■■□□ 2.08
CDK6-205ENST00000491250 MYH14Q7Z406 1995 aaKnown RBP28.05■■■□□ 2.08
CDK6-205ENST00000491250 VIRMAQ69YN4 1812 aaKnown RBP28.04■■■□□ 2.08
CDK6-205ENST00000491250 NLGN1Q8N2Q7 840 aa28.04■■■□□ 2.08
CDK6-205ENST00000491250 GAS2L2Q8NHY3 880 aa28.04■■■□□ 2.08
CDK6-205ENST00000491250 PPP2R1AP30153 589 aa28.03■■■□□ 2.08
CDK6-205ENST00000491250 DNAJC10Q8IXB1 793 aa28.03■■■□□ 2.08
CDK6-205ENST00000491250 WWC3Q9ULE0 1092 aa28.03■■■□□ 2.08
CDK6-205ENST00000491250 GYS1P13807 737 aa28.02■■■□□ 2.08
CDK6-205ENST00000491250 ADAMTS7Q9UKP4 1686 aa28.02■■■□□ 2.08
CDK6-205ENST00000491250 CICQ96RK0 1608 aaPredicted RBP28.01■■■□□ 2.07
CDK6-205ENST00000491250 NUDCQ9Y266 331 aa28.01■■■□□ 2.07
CDK6-205ENST00000491250 C4AP0C0L4 1744 aa28■■■□□ 2.07
CDK6-205ENST00000491250 GNAT3A8MTJ3 354 aa27.99■■■□□ 2.07
CDK6-205ENST00000491250 PRKAR2BP31323 418 aa27.99■■■□□ 2.07
CDK6-205ENST00000491250 INTS5Q6P9B9 1019 aaKnown RBP27.99■■■□□ 2.07
CDK6-205ENST00000491250 CCDC87Q9NVE4 849 aa27.99■■■□□ 2.07
CDK6-205ENST00000491250 SRP68Q9UHB9 627 aaKnown RBP27.99■■■□□ 2.07
CDK6-205ENST00000491250 KCPQ6ZWJ8 1503 aa27.98■■■□□ 2.07
CDK6-205ENST00000491250 GOLGB1Q14789 3259 aaKnown RBP27.98■■■□□ 2.07
CDK6-205ENST00000491250 TEFQ10587 303 aa27.97■■■□□ 2.07
CDK6-205ENST00000491250 TTC5Q8N0Z6 440 aa27.97■■■□□ 2.07
CDK6-205ENST00000491250 RSPH6AQ9H0K4 717 aa27.97■■■□□ 2.07
CDK6-205ENST00000491250 PARP3Q9Y6F1 533 aa27.97■■■□□ 2.07
CDK6-205ENST00000491250 U2AF1L5P0DN76 240 aaPredicted RBP27.96■■■□□ 2.07
CDK6-205ENST00000491250 U2AF1Q01081 240 aaKnown RBP eCLIP27.96■■■□□ 2.07
CDK6-205ENST00000491250 IL17REQ8NFR9 667 aa27.96■■■□□ 2.07
CDK6-205ENST00000491250 USP42Q9H9J4 1324 aaKnown RBP27.95■■■□□ 2.07
CDK6-205ENST00000491250 CYP19A1P11511 503 aaPredicted RBP27.95■■■□□ 2.06
CDK6-205ENST00000491250 PHACTR3Q96KR7 559 aa27.95■■■□□ 2.06
CDK6-205ENST00000491250 VSIG10Q8N0Z9 540 aa27.93■■■□□ 2.06
CDK6-205ENST00000491250 SOS1Q07889 1333 aaPredicted RBP27.92■■■□□ 2.06
CDK6-205ENST00000491250 C10orf71Q711Q0 1435 aa27.92■■■□□ 2.06
CDK6-205ENST00000491250 FKBP8Q14318 412 aa27.92■■■□□ 2.06
CDK6-205ENST00000491250 ZBTB1Q9Y2K1 713 aa27.92■■■□□ 2.06
CDK6-205ENST00000491250 PXDNLA1KZ92 1463 aa27.91■■■□□ 2.06
CDK6-205ENST00000491250 ZPR1O75312 459 aa27.91■■■□□ 2.06
CDK6-205ENST00000491250 UBR2Q8IWV8 1755 aa27.9■■■□□ 2.06
CDK6-205ENST00000491250 TGFB2P61812 414 aa27.89■■■□□ 2.06
CDK6-205ENST00000491250 USPL1Q5W0Q7 1092 aa27.89■■■□□ 2.06
CDK6-205ENST00000491250 ZNF790Q6PG37 636 aa27.89■■■□□ 2.06
CDK6-205ENST00000491250 KIF13BQ9NQT8 1826 aa27.89■■■□□ 2.06
CDK6-205ENST00000491250 COL15A1P39059 1388 aa27.88■■■□□ 2.05
CDK6-205ENST00000491250 ZNF496Q96IT1 587 aaPredicted RBP27.88■■■□□ 2.05
CDK6-205ENST00000491250 CEMIPQ8WUJ3 1361 aa27.87■■■□□ 2.05
CDK6-205ENST00000491250 A0A0G2JLW4 131 aa27.87■■■□□ 2.05
CDK6-205ENST00000491250 FCHSD2O94868 740 aa27.87■■■□□ 2.05
CDK6-205ENST00000491250 CANXP27824 592 aaKnown RBP27.87■■■□□ 2.05
CDK6-205ENST00000491250 STARD3NLO95772 234 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms