RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 TGFB2P61812 414 aa19.03■□□□□ 0.64
CTDSP1-210ENST00000491064 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
CTDSP1-210ENST00000491064 BRCA1P38398 1863 aaKnown RBP19.03■□□□□ 0.64
CTDSP1-210ENST00000491064 C10orf71Q711Q0 1435 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 PHKG2P15735 406 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 IFNL2Q8IZJ0 200 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 DNAJC5GQ8N7S2 189 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 EYA1Q99502 592 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 ATG3Q9NT62 314 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 BCS1LQ9Y276 419 aa19.02■□□□□ 0.64
CTDSP1-210ENST00000491064 WASHC2AQ641Q2 1341 aa19.01■□□□□ 0.63
CTDSP1-210ENST00000491064 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
CTDSP1-210ENST00000491064 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
CTDSP1-210ENST00000491064 KDRP35968 1356 aa19.01■□□□□ 0.63
CTDSP1-210ENST00000491064 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
CTDSP1-210ENST00000491064 C4AP0C0L4 1744 aa19■□□□□ 0.63
CTDSP1-210ENST00000491064 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 TRAPPC3LQ5T215 181 aa18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 NLGN1Q8N2Q7 840 aa18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 NMRK2Q9NPI5 230 aa18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 RTCBQ9Y3I0 505 aaKnown RBP18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 COL5A3P25940 1745 aaPredicted RBP18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 WDR90Q96KV7 1748 aa18.99■□□□□ 0.63
CTDSP1-210ENST00000491064 ARFGEF1Q9Y6D6 1849 aa18.98■□□□□ 0.63
CTDSP1-210ENST00000491064 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
CTDSP1-210ENST00000491064 SLC4A9Q96Q91 983 aa18.98■□□□□ 0.63
CTDSP1-210ENST00000491064 DPEP1P16444 411 aa18.97■□□□□ 0.63
CTDSP1-210ENST00000491064 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
CTDSP1-210ENST00000491064 MYH14Q7Z406 1995 aaKnown RBP18.97■□□□□ 0.63
CTDSP1-210ENST00000491064 FCHSD2O94868 740 aa18.96■□□□□ 0.63
CTDSP1-210ENST00000491064 GYS1P13807 737 aa18.96■□□□□ 0.63
CTDSP1-210ENST00000491064 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
CTDSP1-210ENST00000491064 PCNTO95613 3336 aa18.95■□□□□ 0.62
CTDSP1-210ENST00000491064 ADRA2BP18089 450 aa18.95■□□□□ 0.62
CTDSP1-210ENST00000491064 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-210ENST00000491064 PLEKHG2Q9H7P9 1386 aa18.94■□□□□ 0.62
CTDSP1-210ENST00000491064 RBM46Q8TBY0 533 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-210ENST00000491064 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-210ENST00000491064 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
CTDSP1-210ENST00000491064 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
CTDSP1-210ENST00000491064 ERVV-2B6SEH9 535 aa18.93■□□□□ 0.62
CTDSP1-210ENST00000491064 KCNA3P22001 575 aa18.93■□□□□ 0.62
CTDSP1-210ENST00000491064 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
CTDSP1-210ENST00000491064 PARP3Q9Y6F1 533 aa18.93■□□□□ 0.62
CTDSP1-210ENST00000491064 RPS6KA4O75676 772 aa18.92■□□□□ 0.62
CTDSP1-210ENST00000491064 RFC4P35249 363 aa18.92■□□□□ 0.62
CTDSP1-210ENST00000491064 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-210ENST00000491064 KLRG1Q96E93 195 aa18.9■□□□□ 0.62
CTDSP1-210ENST00000491064 DCAF5Q96JK2 942 aa18.9■□□□□ 0.62
CTDSP1-210ENST00000491064 KCPQ6ZWJ8 1503 aa18.9■□□□□ 0.62
CTDSP1-210ENST00000491064 SBF1O95248 1867 aa18.89■□□□□ 0.61
CTDSP1-210ENST00000491064 HTRA3P83110 453 aa18.89■□□□□ 0.61
CTDSP1-210ENST00000491064 C16orf71Q8IYS4 520 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-210ENST00000491064 PIM2Q9P1W9 311 aa18.89■□□□□ 0.61
CTDSP1-210ENST00000491064 KDM6AO15550 1401 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-210ENST00000491064 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-210ENST00000491064 FSTL1Q12841 308 aa18.88■□□□□ 0.61
CTDSP1-210ENST00000491064 JMYQ8N9B5 988 aa18.87■□□□□ 0.61
CTDSP1-210ENST00000491064 TNRC6CQ9HCJ0 1690 aaKnown RBP18.86■□□□□ 0.61
CTDSP1-210ENST00000491064 KDM2BQ8NHM5 1336 aa18.86■□□□□ 0.61
CTDSP1-210ENST00000491064 DALRD3Q5D0E6 543 aaKnown RBP18.86■□□□□ 0.61
CTDSP1-210ENST00000491064 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 CABP4P57796 275 aa18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 DDR1Q08345 913 aa18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 FKBP8Q14318 412 aa18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 COL13A1Q5TAT6 717 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 RNF181Q9P0P0 153 aa18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 SRP68Q9UHB9 627 aaKnown RBP18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 TJP1Q07157 1748 aa18.85■□□□□ 0.61
CTDSP1-210ENST00000491064 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-210ENST00000491064 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-210ENST00000491064 CRKLP46109 303 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-210ENST00000491064 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-210ENST00000491064 RRAGCQ9HB90 399 aa18.84■□□□□ 0.61
CTDSP1-210ENST00000491064 ADAMTS7Q9UKP4 1686 aa18.83■□□□□ 0.61
CTDSP1-210ENST00000491064 CHRNA5P30532 468 aa18.82■□□□□ 0.6
CTDSP1-210ENST00000491064 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
CTDSP1-210ENST00000491064 POLRMTO00411 1230 aaKnown RBP18.8■□□□□ 0.6
CTDSP1-210ENST00000491064 MTHFSP49914 203 aa18.8■□□□□ 0.6
CTDSP1-210ENST00000491064 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
CTDSP1-210ENST00000491064 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
CTDSP1-210ENST00000491064 TM4SF1P30408 202 aa18.79■□□□□ 0.6
CTDSP1-210ENST00000491064 SMC1BQ8NDV3 1235 aa18.79■□□□□ 0.6
CTDSP1-210ENST00000491064 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
CTDSP1-210ENST00000491064 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
CTDSP1-210ENST00000491064 INTS5Q6P9B9 1019 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-210ENST00000491064 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
CTDSP1-210ENST00000491064 ZC3H4Q9UPT8 1303 aaKnown RBP18.77■□□□□ 0.6
CTDSP1-210ENST00000491064 DLEC1Q9Y238 1755 aa18.76■□□□□ 0.59
CTDSP1-210ENST00000491064 RASSF7Q02833 373 aa18.76■□□□□ 0.59
CTDSP1-210ENST00000491064 NRXN2Q9P2S2 1712 aa18.76■□□□□ 0.59
CTDSP1-210ENST00000491064 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
CTDSP1-210ENST00000491064 CAPN15O75808 1086 aa18.75■□□□□ 0.59
CTDSP1-210ENST00000491064 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
CTDSP1-210ENST00000491064 TNS4Q8IZW8 715 aa18.75■□□□□ 0.59
CTDSP1-210ENST00000491064 POLR3GLQ9BT43 218 aa18.75■□□□□ 0.59
CTDSP1-210ENST00000491064 ZPR1O75312 459 aa18.74■□□□□ 0.59
CTDSP1-210ENST00000491064 SOS1Q07889 1333 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-210ENST00000491064 PRELPP51888 382 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms