RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 USP6P35125 1406 aa23.61■■□□□ 1.37
SNAPC3-206ENST00000490969 NALCNQ8IZF0 1738 aa23.61■■□□□ 1.37
SNAPC3-206ENST00000490969 GNAI1P63096 354 aa23.61■■□□□ 1.37
SNAPC3-206ENST00000490969 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
SNAPC3-206ENST00000490969 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
SNAPC3-206ENST00000490969 SDSP20132 328 aa23.6■■□□□ 1.37
SNAPC3-206ENST00000490969 IFT57Q9NWB7 429 aa23.6■■□□□ 1.37
SNAPC3-206ENST00000490969 OTUD7AQ8TE49 926 aaPredicted RBP23.6■■□□□ 1.37
SNAPC3-206ENST00000490969 NRKQ7Z2Y5 1582 aa23.59■■□□□ 1.37
SNAPC3-206ENST00000490969 COG3Q96JB2 828 aa23.59■■□□□ 1.37
SNAPC3-206ENST00000490969 MBIPQ9NS73 344 aa23.59■■□□□ 1.37
SNAPC3-206ENST00000490969 TWISTNBQ3B726 338 aaPredicted RBP23.59■■□□□ 1.37
SNAPC3-206ENST00000490969 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
SNAPC3-206ENST00000490969 KIF24Q5T7B8 1368 aa23.58■■□□□ 1.37
SNAPC3-206ENST00000490969 REC8O95072 547 aa23.58■■□□□ 1.36
SNAPC3-206ENST00000490969 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.36
SNAPC3-206ENST00000490969 KIAA2012Q0VF49 1180 aa23.58■■□□□ 1.36
SNAPC3-206ENST00000490969 NGDNQ8NEJ9 315 aaKnown RBP23.58■■□□□ 1.36
SNAPC3-206ENST00000490969 SOX12O15370 315 aa23.57■■□□□ 1.36
SNAPC3-206ENST00000490969 ZNF853P0CG23 659 aa23.57■■□□□ 1.36
SNAPC3-206ENST00000490969 FOXD4L5Q5VV16 416 aaPredicted RBP23.57■■□□□ 1.36
SNAPC3-206ENST00000490969 FOXD4L4Q8WXT5 416 aaPredicted RBP23.57■■□□□ 1.36
SNAPC3-206ENST00000490969 SSH2Q76I76 1423 aa23.57■■□□□ 1.36
SNAPC3-206ENST00000490969 TSPY26PQ9H489 355 aa23.56■■□□□ 1.36
SNAPC3-206ENST00000490969 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNAPC3-206ENST00000490969 FMN2Q9NZ56 1722 aa23.55■■□□□ 1.36
SNAPC3-206ENST00000490969 ANKRD44Q8N8A2 993 aa23.55■■□□□ 1.36
SNAPC3-206ENST00000490969 C8orf58Q8NAV2 365 aa23.55■■□□□ 1.36
SNAPC3-206ENST00000490969 CCDC94Q9BW85 323 aaPredicted RBP23.55■■□□□ 1.36
SNAPC3-206ENST00000490969 HMOX1P09601 288 aa23.54■■□□□ 1.36
SNAPC3-206ENST00000490969 MYRIPQ8NFW9 859 aa23.54■■□□□ 1.36
SNAPC3-206ENST00000490969 ATP10DQ9P241 1426 aa23.53■■□□□ 1.36
SNAPC3-206ENST00000490969 ERC2O15083 957 aa23.53■■□□□ 1.36
SNAPC3-206ENST00000490969 NUTM2GQ5VZR2 741 aa23.53■■□□□ 1.36
SNAPC3-206ENST00000490969 BRD1O95696 1058 aa23.52■■□□□ 1.36
SNAPC3-206ENST00000490969 TMX3Q96JJ7 454 aa23.52■■□□□ 1.36
SNAPC3-206ENST00000490969 OVOS2A0A0J9YW53 1432 aa23.51■■□□□ 1.35
SNAPC3-206ENST00000490969 OVOS2Q6IE36 1432 aa23.51■■□□□ 1.35
SNAPC3-206ENST00000490969 SMARCA5O60264 1052 aaPredicted RBP23.51■■□□□ 1.35
SNAPC3-206ENST00000490969 PRDM10Q9NQV6 1147 aa23.51■■□□□ 1.35
SNAPC3-206ENST00000490969 RPAP2Q8IXW5 612 aaPredicted RBP23.51■■□□□ 1.35
SNAPC3-206ENST00000490969 SYAP1Q96A49 352 aaPredicted RBP23.51■■□□□ 1.35
SNAPC3-206ENST00000490969 DNTTIP2Q5QJE6 756 aaKnown RBP23.5■■□□□ 1.35
SNAPC3-206ENST00000490969 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
SNAPC3-206ENST00000490969 NEK4P51957 841 aa23.5■■□□□ 1.35
SNAPC3-206ENST00000490969 CEP85Q6P2H3 762 aa23.5■■□□□ 1.35
SNAPC3-206ENST00000490969 AATKQ6ZMQ8 1374 aa23.49■■□□□ 1.35
SNAPC3-206ENST00000490969 APBB1O00213 710 aa23.49■■□□□ 1.35
SNAPC3-206ENST00000490969 ADGRL3Q9HAR2 1447 aa23.48■■□□□ 1.35
SNAPC3-206ENST00000490969 IL13P35225 146 aa23.48■■□□□ 1.35
SNAPC3-206ENST00000490969 PRIMPOLQ96LW4 560 aa23.48■■□□□ 1.35
SNAPC3-206ENST00000490969 ANKARQ7Z5J8 1434 aa23.48■■□□□ 1.35
SNAPC3-206ENST00000490969 MCM2P49736 904 aa23.47■■□□□ 1.35
SNAPC3-206ENST00000490969 PROSER2Q86WR7 435 aaPredicted RBP23.47■■□□□ 1.35
SNAPC3-206ENST00000490969 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
SNAPC3-206ENST00000490969 ZBTB7CA1YPR0 619 aa23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 CUL4AQ13619 759 aa23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 PIBF1Q8WXW3 757 aa23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 PHF14O94880 888 aa23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 ESCO1Q5FWF5 840 aa23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 UTP14CQ5TAP6 766 aaKnown RBP23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
SNAPC3-206ENST00000490969 PIK3C2AO00443 1686 aa23.45■■□□□ 1.34
SNAPC3-206ENST00000490969 HMGN5P82970 282 aaKnown RBP23.45■■□□□ 1.34
SNAPC3-206ENST00000490969 DMTNQ08495 405 aa23.45■■□□□ 1.34
SNAPC3-206ENST00000490969 JARID2Q92833 1246 aaPredicted RBP23.45■■□□□ 1.34
SNAPC3-206ENST00000490969 STRCP1A6NGW2 1772 aa23.45■■□□□ 1.34
SNAPC3-206ENST00000490969 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
SNAPC3-206ENST00000490969 HSP90AB2PQ58FF8 381 aa23.44■■□□□ 1.34
SNAPC3-206ENST00000490969 ZNF710Q8N1W2 664 aa23.44■■□□□ 1.34
SNAPC3-206ENST00000490969 CDK12Q9NYV4 1490 aaPredicted RBP23.44■■□□□ 1.34
SNAPC3-206ENST00000490969 PEAK1Q9H792 1746 aa23.44■■□□□ 1.34
SNAPC3-206ENST00000490969 RTL1A6NKG5 1358 aa23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 NOLC1Q14978 699 aaKnown RBP eCLIP23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 FAM184AQ8NB25 1140 aa23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 GTF2F1P35269 517 aaKnown RBP eCLIP23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 UVSSAQ2YD98 709 aa23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 TSC1Q92574 1164 aa23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 ZHX1Q9UKY1 873 aaPredicted RBP23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 DLG5Q8TDM6 1919 aa23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 RGS12O14924 1447 aa23.43■■□□□ 1.34
SNAPC3-206ENST00000490969 INTS4Q96HW7 963 aaKnown RBP23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 ZNF830Q96NB3 372 aaPredicted RBP23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 NWD1Q149M9 1564 aa23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 USP31Q70CQ4 1352 aa23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 ZSCAN20P17040 1043 aaPredicted RBP23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 NLRP6P59044 892 aa23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 MPNDQ8N594 471 aa23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 TTC21AQ8NDW8 1320 aa23.42■■□□□ 1.34
SNAPC3-206ENST00000490969 MSH6P52701 1360 aa23.41■■□□□ 1.34
SNAPC3-206ENST00000490969 GADD45BO75293 160 aaPredicted RBP23.41■■□□□ 1.34
SNAPC3-206ENST00000490969 FAM83GA6ND36 823 aa23.4■■□□□ 1.34
SNAPC3-206ENST00000490969 PODXL2Q9NZ53 605 aa23.4■■□□□ 1.34
SNAPC3-206ENST00000490969 USP25Q9UHP3 1055 aa23.4■■□□□ 1.34
SNAPC3-206ENST00000490969 MAP3K19Q56UN5 1328 aa23.4■■□□□ 1.34
SNAPC3-206ENST00000490969 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
SNAPC3-206ENST00000490969 OSBPL3Q9H4L5 887 aa23.4■■□□□ 1.34
SNAPC3-206ENST00000490969 AEBP1Q8IUX7 1158 aa23.39■■□□□ 1.34
SNAPC3-206ENST00000490969 GDPD2Q9HCC8 539 aa23.39■■□□□ 1.34
SNAPC3-206ENST00000490969 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms