RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PTF1AQ7RTS3 328 aa20.83■□□□□ 0.93
TRA2A-208ENST00000490942 BTAF1O14981 1849 aa20.83■□□□□ 0.92
TRA2A-208ENST00000490942 CCDC27Q2M243 656 aa20.82■□□□□ 0.92
TRA2A-208ENST00000490942 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
TRA2A-208ENST00000490942 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
TRA2A-208ENST00000490942 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
TRA2A-208ENST00000490942 BABAM1Q9NWV8 329 aa20.8■□□□□ 0.92
TRA2A-208ENST00000490942 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
TRA2A-208ENST00000490942 SLC27A3Q5K4L6 730 aa20.79■□□□□ 0.92
TRA2A-208ENST00000490942 MCM10Q7L590 875 aa20.79■□□□□ 0.92
TRA2A-208ENST00000490942 TRIM35Q9UPQ4 493 aa20.79■□□□□ 0.92
TRA2A-208ENST00000490942 PALLDQ8WX93 1383 aa20.78■□□□□ 0.92
TRA2A-208ENST00000490942 CALD1Q05682 793 aaKnown RBP20.78■□□□□ 0.92
TRA2A-208ENST00000490942 ATG3Q9NT62 314 aa20.78■□□□□ 0.92
TRA2A-208ENST00000490942 VIRMAQ69YN4 1812 aaKnown RBP20.77■□□□□ 0.92
TRA2A-208ENST00000490942 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.92
TRA2A-208ENST00000490942 TAF7Q15545 349 aaPredicted RBP20.77■□□□□ 0.92
TRA2A-208ENST00000490942 RRP7AQ9Y3A4 280 aaKnown RBP20.77■□□□□ 0.92
TRA2A-208ENST00000490942 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.91
TRA2A-208ENST00000490942 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
TRA2A-208ENST00000490942 LY75O60449 1722 aa20.75■□□□□ 0.91
TRA2A-208ENST00000490942 DCTN1Q14203 1278 aa20.75■□□□□ 0.91
TRA2A-208ENST00000490942 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
TRA2A-208ENST00000490942 TXNRD1Q16881 649 aa20.75■□□□□ 0.91
TRA2A-208ENST00000490942 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
TRA2A-208ENST00000490942 PAPPAQ13219 1627 aa20.75■□□□□ 0.91
TRA2A-208ENST00000490942 BTBD11A6QL63 1104 aa20.74■□□□□ 0.91
TRA2A-208ENST00000490942 PIAS4Q8N2W9 510 aaPredicted RBP20.74■□□□□ 0.91
TRA2A-208ENST00000490942 ZNF831Q5JPB2 1677 aa20.73■□□□□ 0.91
TRA2A-208ENST00000490942 EZH2Q15910 746 aaKnown RBP20.73■□□□□ 0.91
TRA2A-208ENST00000490942 ZNF790Q6PG37 636 aa20.73■□□□□ 0.91
TRA2A-208ENST00000490942 PROM2Q8N271 834 aa20.73■□□□□ 0.91
TRA2A-208ENST00000490942 LOC102724428A0A0B4J2F2 783 aa20.72■□□□□ 0.91
TRA2A-208ENST00000490942 SIK1P57059 783 aa20.72■□□□□ 0.91
TRA2A-208ENST00000490942 TTC5Q8N0Z6 440 aa20.72■□□□□ 0.91
TRA2A-208ENST00000490942 VSIG10Q8N0Z9 540 aa20.72■□□□□ 0.91
TRA2A-208ENST00000490942 RREB1Q92766 1687 aa20.72■□□□□ 0.91
TRA2A-208ENST00000490942 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
TRA2A-208ENST00000490942 CCNL1Q9UK58 526 aaPredicted RBP20.71■□□□□ 0.91
TRA2A-208ENST00000490942 IL16Q14005 1332 aa20.71■□□□□ 0.91
TRA2A-208ENST00000490942 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
TRA2A-208ENST00000490942 CFAP44Q96MT7 982 aa20.7■□□□□ 0.9
TRA2A-208ENST00000490942 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
TRA2A-208ENST00000490942 CHL1O00533 1208 aa20.69■□□□□ 0.9
TRA2A-208ENST00000490942 WDR63Q8IWG1 891 aa20.69■□□□□ 0.9
TRA2A-208ENST00000490942 IFT57Q9NWB7 429 aa20.69■□□□□ 0.9
TRA2A-208ENST00000490942 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
TRA2A-208ENST00000490942 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
TRA2A-208ENST00000490942 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
TRA2A-208ENST00000490942 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
TRA2A-208ENST00000490942 GNAI1P63096 354 aa20.67■□□□□ 0.9
TRA2A-208ENST00000490942 SLC39A6Q13433 755 aa20.67■□□□□ 0.9
TRA2A-208ENST00000490942 TEX13AQ9BXU3 409 aaPredicted RBP20.67■□□□□ 0.9
TRA2A-208ENST00000490942 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
TRA2A-208ENST00000490942 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
TRA2A-208ENST00000490942 KDM3BQ7LBC6 1761 aa20.65■□□□□ 0.9
TRA2A-208ENST00000490942 NUP188Q5SRE5 1749 aa20.65■□□□□ 0.9
TRA2A-208ENST00000490942 HEG1Q9ULI3 1381 aa20.65■□□□□ 0.9
TRA2A-208ENST00000490942 ZNF521Q96K83 1311 aa20.65■□□□□ 0.9
TRA2A-208ENST00000490942 PTCD1O75127 700 aaKnown RBP20.65■□□□□ 0.9
TRA2A-208ENST00000490942 NBPF14Q5TI25 921 aa20.65■□□□□ 0.9
TRA2A-208ENST00000490942 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
TRA2A-208ENST00000490942 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
TRA2A-208ENST00000490942 TSPYL4Q9UJ04 414 aa20.65■□□□□ 0.9
TRA2A-208ENST00000490942 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
TRA2A-208ENST00000490942 C5P01031 1676 aa20.63■□□□□ 0.89
TRA2A-208ENST00000490942 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
TRA2A-208ENST00000490942 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
TRA2A-208ENST00000490942 ITPK1Q13572 414 aa20.62■□□□□ 0.89
TRA2A-208ENST00000490942 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
TRA2A-208ENST00000490942 CNTNAP4Q9C0A0 1308 aa20.61■□□□□ 0.89
TRA2A-208ENST00000490942 KCNQ3O43525 872 aa20.61■□□□□ 0.89
TRA2A-208ENST00000490942 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
TRA2A-208ENST00000490942 STARD3NLO95772 234 aa20.6■□□□□ 0.89
TRA2A-208ENST00000490942 AKT1S1Q96B36 256 aa20.6■□□□□ 0.89
TRA2A-208ENST00000490942 STK32BQ9NY57 414 aa20.6■□□□□ 0.89
TRA2A-208ENST00000490942 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
TRA2A-208ENST00000490942 HOXB7P09629 217 aa20.59■□□□□ 0.89
TRA2A-208ENST00000490942 SLC15A2Q16348 729 aa20.59■□□□□ 0.89
TRA2A-208ENST00000490942 LINC00116Q8NCU8 138 aa20.59■□□□□ 0.89
TRA2A-208ENST00000490942 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
TRA2A-208ENST00000490942 TAF1LQ8IZX4 1826 aa20.59■□□□□ 0.89
TRA2A-208ENST00000490942 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.89
TRA2A-208ENST00000490942 TJP1Q07157 1748 aa20.58■□□□□ 0.89
TRA2A-208ENST00000490942 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.89
TRA2A-208ENST00000490942 C4BP0C0L5 1744 aa20.57■□□□□ 0.88
TRA2A-208ENST00000490942 CYP19A1P11511 503 aaPredicted RBP20.57■□□□□ 0.88
TRA2A-208ENST00000490942 DNAJC10Q8IXB1 793 aa20.57■□□□□ 0.88
TRA2A-208ENST00000490942 CHMP4AQ9BY43 222 aa20.57■□□□□ 0.88
TRA2A-208ENST00000490942 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
TRA2A-208ENST00000490942 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
TRA2A-208ENST00000490942 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
TRA2A-208ENST00000490942 KCNQ4P56696 695 aa20.56■□□□□ 0.88
TRA2A-208ENST00000490942 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
TRA2A-208ENST00000490942 FLAD1Q8NFF5 587 aa20.56■□□□□ 0.88
TRA2A-208ENST00000490942 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
TRA2A-208ENST00000490942 AK7Q96M32 723 aa20.55■□□□□ 0.88
TRA2A-208ENST00000490942 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
TRA2A-208ENST00000490942 E9PSI1 815 aa20.54■□□□□ 0.88
TRA2A-208ENST00000490942 ADRA2BP18089 450 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms