RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 GJB2P29033 226 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 CWC27Q6UX04 472 aaKnown RBP13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 USP8P40818 1118 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 STK3Q13188 491 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 CLASRPQ8N2M8 674 aaKnown RBP13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 GTF3C6Q969F1 213 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 ABCC2Q92887 1545 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 ME1P48163 572 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 C10orf67Q8IYJ2 551 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 ANKRD44Q8N8A2 993 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 SERPINC1P01008 464 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 GPATCH11Q8N954 259 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 ZNF396Q96N95 335 aaPredicted RBP13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 RDXP35241 583 aaKnown RBP13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
CRNKL1-204ENST00000490910 BLOC1S2Q6QNY1 142 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 PDE1AP54750 535 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 TSHZ3Q63HK5 1081 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 CCDC102AQ96A19 550 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 DACT1Q9NYF0 836 aa13.28□□□□□ -0.28
CRNKL1-204ENST00000490910 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.28
CRNKL1-204ENST00000490910 ELF2Q15723 593 aa13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 ARHGAP29Q52LW3 1261 aa13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 KIAA1524Q8TCG1 905 aa13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 A2MP01023 1474 aa13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 CTAGE5O15320 804 aa13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.29
CRNKL1-204ENST00000490910 ANKRD36BQ8N2N9 1353 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 MAGI2Q86UL8 1455 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 CALRP27797 417 aaKnown RBP13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 C9orf78Q9NZ63 289 aaPredicted RBP13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 ZSCAN12O43309 604 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 STK38Q15208 465 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 STX1AQ16623 288 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 NSD2O96028 1365 aa13.26□□□□□ -0.29
CRNKL1-204ENST00000490910 TSR1Q2NL82 804 aaKnown RBP13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 CPLX1O14810 134 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 SYT1P21579 422 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 FSD1Q9BTV5 496 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 ARFGAP3Q9NP61 516 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 HOOK1Q9UJC3 728 aaKnown RBP13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 CCDC69A6NI79 296 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 HIP1O00291 1037 aa13.25□□□□□ -0.29
CRNKL1-204ENST00000490910 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 RUFY1Q96T51 708 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 NSFL1CQ9UNZ2 370 aaKnown RBP13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 ADGRL2O95490 1459 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 ITSN2Q9NZM3 1697 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 GSPT1P15170 499 aaKnown RBP13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 ADGRF5Q8IZF2 1346 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 IVLP07476 585 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 G3BP1Q13283 466 aaKnown RBP eCLIP13.24□□□□□ -0.293e-6■■■■□ 22.7
CRNKL1-204ENST00000490910 TMC6Q7Z403 805 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 MBIPQ9NS73 344 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 DNAI1Q9UI46 699 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 VAMP4O75379 141 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 CCDC30Q5VVM6 783 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 TTLL5Q6EMB2 1281 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
CRNKL1-204ENST00000490910 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
CRNKL1-204ENST00000490910 CFAP100Q494V2 611 aa13.23□□□□□ -0.29
CRNKL1-204ENST00000490910 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
CRNKL1-204ENST00000490910 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
CRNKL1-204ENST00000490910 ZNF215Q9UL58 517 aaPredicted RBP13.23□□□□□ -0.29
CRNKL1-204ENST00000490910 TUBB4AP04350 444 aa13.22□□□□□ -0.29
CRNKL1-204ENST00000490910 CASQ1P31415 396 aa13.22□□□□□ -0.29
CRNKL1-204ENST00000490910 FAM193AP78312 1265 aa13.22□□□□□ -0.29
CRNKL1-204ENST00000490910 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
CRNKL1-204ENST00000490910 MEIS3Q99687 375 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms