RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
VARS-227ENST00000489979 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
VARS-227ENST00000489979 N4BP2Q86UW6 1770 aaPredicted RBP19.39■□□□□ 0.69
VARS-227ENST00000489979 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.69
VARS-227ENST00000489979 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
VARS-227ENST00000489979 KIAA1551Q9HCM1 1747 aa19.37■□□□□ 0.69
VARS-227ENST00000489979 TRAPPC3LQ5T215 181 aa19.36■□□□□ 0.69
VARS-227ENST00000489979 POLKQ9UBT6 870 aa19.36■□□□□ 0.69
VARS-227ENST00000489979 RTCBQ9Y3I0 505 aaKnown RBP19.36■□□□□ 0.69
VARS-227ENST00000489979 TGFB2P61812 414 aa19.35■□□□□ 0.69
VARS-227ENST00000489979 BCS1LQ9Y276 419 aa19.35■□□□□ 0.69
VARS-227ENST00000489979 KDRP35968 1356 aa19.34■□□□□ 0.69
VARS-227ENST00000489979 A0A0G2JLW4 131 aa19.34■□□□□ 0.69
VARS-227ENST00000489979 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
VARS-227ENST00000489979 EIF4A2Q14240 407 aaKnown RBP19.33■□□□□ 0.68
VARS-227ENST00000489979 NLGN1Q8N2Q7 840 aa19.33■□□□□ 0.68
VARS-227ENST00000489979 RBM42Q9BTD8 480 aaKnown RBP19.33■□□□□ 0.68
VARS-227ENST00000489979 C10orf71Q711Q0 1435 aa19.33■□□□□ 0.68
VARS-227ENST00000489979 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
VARS-227ENST00000489979 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
VARS-227ENST00000489979 DPEP1P16444 411 aa19.31■□□□□ 0.68
VARS-227ENST00000489979 TNNT2P45379 298 aaPredicted RBP19.31■□□□□ 0.68
VARS-227ENST00000489979 APLP1P51693 650 aa19.31■□□□□ 0.68
VARS-227ENST00000489979 RC3H1Q5TC82 1133 aaKnown RBP19.31■□□□□ 0.68
VARS-227ENST00000489979 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
VARS-227ENST00000489979 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
VARS-227ENST00000489979 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
VARS-227ENST00000489979 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
VARS-227ENST00000489979 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
VARS-227ENST00000489979 TOMM70O94826 608 aa19.3■□□□□ 0.68
VARS-227ENST00000489979 GYS1P13807 737 aa19.3■□□□□ 0.68
VARS-227ENST00000489979 ADRA2BP18089 450 aa19.3■□□□□ 0.68
VARS-227ENST00000489979 CNTNAP4Q9C0A0 1308 aa19.29■□□□□ 0.68
VARS-227ENST00000489979 BRCA1P38398 1863 aaKnown RBP19.29■□□□□ 0.68
VARS-227ENST00000489979 FCHSD2O94868 740 aa19.29■□□□□ 0.68
VARS-227ENST00000489979 RFC4P35249 363 aa19.29■□□□□ 0.68
VARS-227ENST00000489979 MYH14Q7Z406 1995 aaKnown RBP19.29■□□□□ 0.68
VARS-227ENST00000489979 RPS6KA4O75676 772 aa19.28■□□□□ 0.68
VARS-227ENST00000489979 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
VARS-227ENST00000489979 DCAF5Q96JK2 942 aa19.28■□□□□ 0.68
VARS-227ENST00000489979 NMRK2Q9NPI5 230 aa19.28■□□□□ 0.68
VARS-227ENST00000489979 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
VARS-227ENST00000489979 PLEKHG2Q9H7P9 1386 aa19.28■□□□□ 0.68
VARS-227ENST00000489979 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
VARS-227ENST00000489979 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
VARS-227ENST00000489979 DNAJC5GQ8N7S2 189 aa19.26■□□□□ 0.67
VARS-227ENST00000489979 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
VARS-227ENST00000489979 KCNA3P22001 575 aa19.25■□□□□ 0.67
VARS-227ENST00000489979 CABP4P57796 275 aa19.25■□□□□ 0.67
VARS-227ENST00000489979 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
VARS-227ENST00000489979 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
VARS-227ENST00000489979 C9orf131Q5VYM1 1079 aa19.24■□□□□ 0.67
VARS-227ENST00000489979 PTCD1O75127 700 aaKnown RBP19.23■□□□□ 0.67
VARS-227ENST00000489979 AMOTQ4VCS5 1084 aa19.22■□□□□ 0.67
VARS-227ENST00000489979 RBM46Q8TBY0 533 aaKnown RBP19.22■□□□□ 0.67
VARS-227ENST00000489979 PIM2Q9P1W9 311 aa19.22■□□□□ 0.67
VARS-227ENST00000489979 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
VARS-227ENST00000489979 CRKLP46109 303 aaKnown RBP19.21■□□□□ 0.67
VARS-227ENST00000489979 MTHFSP49914 203 aa19.21■□□□□ 0.67
VARS-227ENST00000489979 FKBP8Q14318 412 aa19.21■□□□□ 0.67
VARS-227ENST00000489979 WDR90Q96KV7 1748 aa19.21■□□□□ 0.67
VARS-227ENST00000489979 DALRD3Q5D0E6 543 aaKnown RBP19.2■□□□□ 0.66
VARS-227ENST00000489979 AEBP1Q8IUX7 1158 aa19.2■□□□□ 0.66
VARS-227ENST00000489979 C16orf71Q8IYS4 520 aaPredicted RBP19.2■□□□□ 0.66
VARS-227ENST00000489979 DDR1Q08345 913 aa19.19■□□□□ 0.66
VARS-227ENST00000489979 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
VARS-227ENST00000489979 NFATC2IPQ8NCF5 419 aa19.19■□□□□ 0.66
VARS-227ENST00000489979 USP42Q9H9J4 1324 aaKnown RBP19.19■□□□□ 0.66
VARS-227ENST00000489979 TJP1Q07157 1748 aa19.18■□□□□ 0.66
VARS-227ENST00000489979 HTRA3P83110 453 aa19.18■□□□□ 0.66
VARS-227ENST00000489979 KCPQ6ZWJ8 1503 aa19.18■□□□□ 0.66
VARS-227ENST00000489979 CHRNA5P30532 468 aa19.17■□□□□ 0.66
VARS-227ENST00000489979 RNF181Q9P0P0 153 aa19.17■□□□□ 0.66
VARS-227ENST00000489979 SBF1O95248 1867 aa19.16■□□□□ 0.66
VARS-227ENST00000489979 PANK3Q9H999 370 aa19.16■□□□□ 0.66
VARS-227ENST00000489979 KDM2BQ8NHM5 1336 aa19.16■□□□□ 0.66
VARS-227ENST00000489979 FSTL1Q12841 308 aa19.15■□□□□ 0.66
VARS-227ENST00000489979 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
VARS-227ENST00000489979 RRAGCQ9HB90 399 aa19.15■□□□□ 0.66
VARS-227ENST00000489979 POLRMTO00411 1230 aaKnown RBP19.14■□□□□ 0.65
VARS-227ENST00000489979 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
VARS-227ENST00000489979 KLRG1Q96E93 195 aa19.14■□□□□ 0.65
VARS-227ENST00000489979 TIMELESSQ9UNS1 1208 aa19.14■□□□□ 0.65
VARS-227ENST00000489979 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
VARS-227ENST00000489979 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
VARS-227ENST00000489979 TM4SF1P30408 202 aa19.13■□□□□ 0.65
VARS-227ENST00000489979 TNRC6CQ9HCJ0 1690 aaKnown RBP19.12■□□□□ 0.65
VARS-227ENST00000489979 ZPR1O75312 459 aa19.12■□□□□ 0.65
VARS-227ENST00000489979 USPL1Q5W0Q7 1092 aa19.12■□□□□ 0.65
VARS-227ENST00000489979 MORC1Q86VD1 984 aa19.12■□□□□ 0.65
VARS-227ENST00000489979 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
VARS-227ENST00000489979 JMYQ8N9B5 988 aa19.11■□□□□ 0.65
VARS-227ENST00000489979 SOS1Q07889 1333 aaPredicted RBP19.1■□□□□ 0.65
VARS-227ENST00000489979 AFDNP55196 1824 aaKnown RBP19.1■□□□□ 0.65
VARS-227ENST00000489979 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
VARS-227ENST00000489979 IL13P35225 146 aa19.09■□□□□ 0.65
VARS-227ENST00000489979 RASSF7Q02833 373 aa19.09■□□□□ 0.65
VARS-227ENST00000489979 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
VARS-227ENST00000489979 COL13A1Q5TAT6 717 aaPredicted RBP19.08■□□□□ 0.64
VARS-227ENST00000489979 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms