RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 C5P01031 1676 aa12.99□□□□□ -0.33
CCT3-213ENST00000489870 GPR162Q16538 588 aa12.99□□□□□ -0.33
CCT3-213ENST00000489870 KDRP35968 1356 aa12.98□□□□□ -0.33
CCT3-213ENST00000489870 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
CCT3-213ENST00000489870 UTRNP46939 3433 aa12.98□□□□□ -0.33
CCT3-213ENST00000489870 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
CCT3-213ENST00000489870 KCNQ4P56696 695 aa12.98□□□□□ -0.33
CCT3-213ENST00000489870 PER1O15534 1290 aaPredicted RBP12.97□□□□□ -0.33
CCT3-213ENST00000489870 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
CCT3-213ENST00000489870 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
CCT3-213ENST00000489870 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
CCT3-213ENST00000489870 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
CCT3-213ENST00000489870 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
CCT3-213ENST00000489870 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
CCT3-213ENST00000489870 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
CCT3-213ENST00000489870 IL13P35225 146 aa12.96□□□□□ -0.33
CCT3-213ENST00000489870 MTHFSP49914 203 aa12.96□□□□□ -0.33
CCT3-213ENST00000489870 ASAP1Q9ULH1 1129 aa12.96□□□□□ -0.33
CCT3-213ENST00000489870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
CCT3-213ENST00000489870 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
CCT3-213ENST00000489870 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
CCT3-213ENST00000489870 TOGARAM1Q9Y4F4 1720 aa12.94□□□□□ -0.34
CCT3-213ENST00000489870 CABP4P57796 275 aa12.94□□□□□ -0.34
CCT3-213ENST00000489870 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
CCT3-213ENST00000489870 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
CCT3-213ENST00000489870 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
CCT3-213ENST00000489870 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
CCT3-213ENST00000489870 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
CCT3-213ENST00000489870 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
CCT3-213ENST00000489870 AKAP4Q5JQC9 854 aa12.93□□□□□ -0.34
CCT3-213ENST00000489870 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
CCT3-213ENST00000489870 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
CCT3-213ENST00000489870 GNPATO15228 680 aa12.91□□□□□ -0.34
CCT3-213ENST00000489870 TGFB2P61812 414 aa12.91□□□□□ -0.34
CCT3-213ENST00000489870 ITPK1Q13572 414 aa12.91□□□□□ -0.34
CCT3-213ENST00000489870 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
CCT3-213ENST00000489870 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
CCT3-213ENST00000489870 ZBTB22O15209 634 aa12.9□□□□□ -0.34
CCT3-213ENST00000489870 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
CCT3-213ENST00000489870 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
CCT3-213ENST00000489870 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
CCT3-213ENST00000489870 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
CCT3-213ENST00000489870 RFC4P35249 363 aa12.89□□□□□ -0.35
CCT3-213ENST00000489870 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
CCT3-213ENST00000489870 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
CCT3-213ENST00000489870 SLC52A2Q9HAB3 445 aa12.88□□□□□ -0.35
CCT3-213ENST00000489870 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
CCT3-213ENST00000489870 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
CCT3-213ENST00000489870 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
CCT3-213ENST00000489870 ARHGEF1Q92888 912 aaKnown RBP12.87□□□□□ -0.35
CCT3-213ENST00000489870 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
CCT3-213ENST00000489870 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
CCT3-213ENST00000489870 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
CCT3-213ENST00000489870 PHF14O94880 888 aa12.86□□□□□ -0.35
CCT3-213ENST00000489870 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.355e-27■■■■■ 53.3
CCT3-213ENST00000489870 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
CCT3-213ENST00000489870 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
CCT3-213ENST00000489870 MMP10P09238 476 aa12.85□□□□□ -0.35
CCT3-213ENST00000489870 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
CCT3-213ENST00000489870 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
CCT3-213ENST00000489870 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
CCT3-213ENST00000489870 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
CCT3-213ENST00000489870 CCDC87Q9NVE4 849 aa12.85□□□□□ -0.35
CCT3-213ENST00000489870 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
CCT3-213ENST00000489870 KIF13BQ9NQT8 1826 aa12.84□□□□□ -0.35
CCT3-213ENST00000489870 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
CCT3-213ENST00000489870 GYS1P13807 737 aa12.84□□□□□ -0.35
CCT3-213ENST00000489870 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
CCT3-213ENST00000489870 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
CCT3-213ENST00000489870 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
CCT3-213ENST00000489870 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
CCT3-213ENST00000489870 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
CCT3-213ENST00000489870 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
CCT3-213ENST00000489870 STARD3NLO95772 234 aa12.82□□□□□ -0.36
CCT3-213ENST00000489870 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
CCT3-213ENST00000489870 MTHFSDQ2M296 383 aaKnown RBP12.82□□□□□ -0.36
CCT3-213ENST00000489870 ADAMTS7Q9UKP4 1686 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 MRC1P22897 1456 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 ZPR1O75312 459 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 TM4SF1P30408 202 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
CCT3-213ENST00000489870 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
CCT3-213ENST00000489870 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
CCT3-213ENST00000489870 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
CCT3-213ENST00000489870 A0A087WZG4 1122 aa12.8□□□□□ -0.36
CCT3-213ENST00000489870 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
CCT3-213ENST00000489870 FCHSD2O94868 740 aa12.8□□□□□ -0.36
CCT3-213ENST00000489870 HMOX1P09601 288 aa12.8□□□□□ -0.36
CCT3-213ENST00000489870 CYP19A1P11511 503 aaPredicted RBP12.8□□□□□ -0.36
CCT3-213ENST00000489870 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
CCT3-213ENST00000489870 TEFQ10587 303 aa12.79□□□□□ -0.36
CCT3-213ENST00000489870 TTC5Q8N0Z6 440 aa12.79□□□□□ -0.36
CCT3-213ENST00000489870 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
CCT3-213ENST00000489870 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
CCT3-213ENST00000489870 RGL2O15211 777 aa12.78□□□□□ -0.36
CCT3-213ENST00000489870 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
CCT3-213ENST00000489870 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
CCT3-213ENST00000489870 ADCY9O60503 1353 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms