RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
VTI1A-207ENST00000489357 CCDC146Q8IYE0 955 aa10.95□□□□□ -0.66
VTI1A-207ENST00000489357 EXOC6Q8TAG9 804 aa10.95□□□□□ -0.66
VTI1A-207ENST00000489357 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
VTI1A-207ENST00000489357 COL14A1Q05707 1796 aaKnown RBP10.95□□□□□ -0.66
VTI1A-207ENST00000489357 OVOS2A0A0J9YW53 1432 aa10.94□□□□□ -0.66
VTI1A-207ENST00000489357 OVOS2Q6IE36 1432 aa10.94□□□□□ -0.66
VTI1A-207ENST00000489357 NUTM2GQ5VZR2 741 aa10.94□□□□□ -0.66
VTI1A-207ENST00000489357 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
VTI1A-207ENST00000489357 LMO7Q8WWI1 1683 aa10.94□□□□□ -0.66
VTI1A-207ENST00000489357 NFAT5O94916 1531 aa10.94□□□□□ -0.66
VTI1A-207ENST00000489357 NRAPQ86VF7 1730 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 C2orf72A6NCS6 295 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 DIAPH1O60610 1272 aaKnown RBP10.93□□□□□ -0.66
VTI1A-207ENST00000489357 FCHSD2O94868 740 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
VTI1A-207ENST00000489357 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
VTI1A-207ENST00000489357 MFSD10Q14728 455 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 NME9Q86XW9 330 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
VTI1A-207ENST00000489357 USP21Q9UK80 565 aa10.93□□□□□ -0.66
VTI1A-207ENST00000489357 ATRNO75882 1429 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 MAPK8IP3Q9UPT6 1336 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 KIF3CO14782 793 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 RXRBP28702 533 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 CENPQQ7L2Z9 268 aaPredicted RBP10.92□□□□□ -0.66
VTI1A-207ENST00000489357 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.92□□□□□ -0.66
VTI1A-207ENST00000489357 PLEKHF1Q96S99 279 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 GGNBP2Q9H3C7 697 aa10.92□□□□□ -0.66
VTI1A-207ENST00000489357 QTRT2Q9H974 415 aaKnown RBP10.92□□□□□ -0.66
VTI1A-207ENST00000489357 KIAA0232Q92628 1395 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 RGPD5Q99666 1765 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 NEFMP07197 916 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-207ENST00000489357 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
VTI1A-207ENST00000489357 UNC5CLQ8IV45 518 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 KCNH5Q8NCM2 988 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 ZNF428Q96B54 188 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 CAMTA1Q9Y6Y1 1673 aa10.91□□□□□ -0.66
VTI1A-207ENST00000489357 CRBNQ96SW2 442 aa10.9□□□□□ -0.66
VTI1A-207ENST00000489357 SCUBE2Q9NQ36 999 aa10.9□□□□□ -0.66
VTI1A-207ENST00000489357 RGS12O14924 1447 aa10.9□□□□□ -0.66
VTI1A-207ENST00000489357 ABCC6O95255 1503 aa10.89□□□□□ -0.67
VTI1A-207ENST00000489357 MAP2P11137 1827 aaKnown RBP10.89□□□□□ -0.67
VTI1A-207ENST00000489357 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
VTI1A-207ENST00000489357 ONECUT3O60422 494 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-207ENST00000489357 ZC3H6P61129 1189 aaKnown RBP10.89□□□□□ -0.67
VTI1A-207ENST00000489357 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
VTI1A-207ENST00000489357 FOXK1P85037 733 aa10.89□□□□□ -0.67
VTI1A-207ENST00000489357 TRPC5Q9UL62 973 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-207ENST00000489357 LTN1O94822 1766 aa10.89□□□□□ -0.67
VTI1A-207ENST00000489357 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 TMPOP42166 694 aaKnown RBP10.88□□□□□ -0.67
VTI1A-207ENST00000489357 DSG2Q14126 1118 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 VPS72Q15906 364 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 LHX8Q68G74 356 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 COG3Q96JB2 828 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
VTI1A-207ENST00000489357 GLI3P10071 1580 aa10.87□□□□□ -0.67
VTI1A-207ENST00000489357 LMOD3Q0VAK6 560 aa10.87□□□□□ -0.67
VTI1A-207ENST00000489357 CHRNA2Q15822 529 aa10.87□□□□□ -0.67
VTI1A-207ENST00000489357 BTG4Q9NY30 223 aa10.87□□□□□ -0.67
VTI1A-207ENST00000489357 POLKQ9UBT6 870 aa10.87□□□□□ -0.67
VTI1A-207ENST00000489357 AXIN2Q9Y2T1 843 aa10.87□□□□□ -0.67
VTI1A-207ENST00000489357 U2SURPO15042 1029 aaKnown RBP10.86□□□□□ -0.67
VTI1A-207ENST00000489357 PLIN1O60240 522 aa10.86□□□□□ -0.67
VTI1A-207ENST00000489357 RARSP54136 660 aaKnown RBP10.86□□□□□ -0.67
VTI1A-207ENST00000489357 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-207ENST00000489357 KIF24Q5T7B8 1368 aa10.86□□□□□ -0.67
VTI1A-207ENST00000489357 E2F4Q16254 413 aa10.85□□□□□ -0.67
VTI1A-207ENST00000489357 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
VTI1A-207ENST00000489357 COL5A2P05997 1499 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-207ENST00000489357 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 FBLN1P23142 703 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 IP6K1Q92551 441 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
VTI1A-207ENST00000489357 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
VTI1A-207ENST00000489357 IL13P35225 146 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 BRPF1P55201 1214 aaPredicted RBP10.83□□□□□ -0.68
VTI1A-207ENST00000489357 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 C20orf194Q5TEA3 1177 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 BRWD3Q6RI45 1802 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 PEAK1Q9H792 1746 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 SPATA31A1Q5TZJ5 1347 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 KIF16BQ96L93 1317 aa10.83□□□□□ -0.68
VTI1A-207ENST00000489357 RGPD1P0DJD0 1748 aa10.82□□□□□ -0.68
VTI1A-207ENST00000489357 BCAR3O75815 825 aa10.82□□□□□ -0.68
VTI1A-207ENST00000489357 ANP32AP39687 249 aaKnown RBP10.82□□□□□ -0.68
VTI1A-207ENST00000489357 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
VTI1A-207ENST00000489357 NFE2L2Q16236 605 aa10.82□□□□□ -0.68
VTI1A-207ENST00000489357 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
VTI1A-207ENST00000489357 RRP7AQ9Y3A4 280 aaKnown RBP10.82□□□□□ -0.68
VTI1A-207ENST00000489357 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms