RNA–Protein interactions for RNA: ENST00000488484.1

RANBP1-214, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-214ENST00000488484 CFAP53Q96M91 514 aa20.53■□□□□ 0.88
RANBP1-214ENST00000488484 PKD1L3Q7Z443 1732 aa20.53■□□□□ 0.88
RANBP1-214ENST00000488484 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
RANBP1-214ENST00000488484 RALBP1Q15311 655 aa20.51■□□□□ 0.87
RANBP1-214ENST00000488484 EYA1Q99502 592 aa20.51■□□□□ 0.87
RANBP1-214ENST00000488484 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
RANBP1-214ENST00000488484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.5■□□□□ 0.87
RANBP1-214ENST00000488484 CYP27B1O15528 508 aa20.5■□□□□ 0.87
RANBP1-214ENST00000488484 SMIM5Q71RC9 77 aa20.5■□□□□ 0.87
RANBP1-214ENST00000488484 PPP2R1AP30153 589 aa20.49■□□□□ 0.87
RANBP1-214ENST00000488484 DIAPH1O60610 1272 aaKnown RBP20.48■□□□□ 0.87
RANBP1-214ENST00000488484 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
RANBP1-214ENST00000488484 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
RANBP1-214ENST00000488484 KIF3CO14782 793 aa20.47■□□□□ 0.87
RANBP1-214ENST00000488484 SSFA2P28290 1259 aa20.47■□□□□ 0.87
RANBP1-214ENST00000488484 IL13P35225 146 aa20.47■□□□□ 0.87
RANBP1-214ENST00000488484 PIGBQ92521 554 aa20.46■□□□□ 0.87
RANBP1-214ENST00000488484 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
RANBP1-214ENST00000488484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.45■□□□□ 0.869e-11■□□□□ 10.7
RANBP1-214ENST00000488484 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
RANBP1-214ENST00000488484 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
RANBP1-214ENST00000488484 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
RANBP1-214ENST00000488484 SIK1P57059 783 aa20.44■□□□□ 0.86
RANBP1-214ENST00000488484 GNPATO15228 680 aa20.43■□□□□ 0.86
RANBP1-214ENST00000488484 KIAA1551Q9HCM1 1747 aa20.43■□□□□ 0.86
RANBP1-214ENST00000488484 KIF13BQ9NQT8 1826 aa20.43■□□□□ 0.86
RANBP1-214ENST00000488484 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
RANBP1-214ENST00000488484 APLP1P51693 650 aa20.41■□□□□ 0.86
RANBP1-214ENST00000488484 NKX1-1Q15270 411 aaPredicted RBP20.41■□□□□ 0.86
RANBP1-214ENST00000488484 SULT6B1Q6IMI4 303 aa20.41■□□□□ 0.86
RANBP1-214ENST00000488484 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
RANBP1-214ENST00000488484 MMP10P09238 476 aa20.4■□□□□ 0.86
RANBP1-214ENST00000488484 AMOTQ4VCS5 1084 aa20.4■□□□□ 0.86
RANBP1-214ENST00000488484 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
RANBP1-214ENST00000488484 KDRP35968 1356 aa20.39■□□□□ 0.85
RANBP1-214ENST00000488484 MYBBP1AQ9BQG0 1328 aaKnown RBP20.39■□□□□ 0.85
RANBP1-214ENST00000488484 ITPK1Q13572 414 aa20.39■□□□□ 0.85
RANBP1-214ENST00000488484 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.85
RANBP1-214ENST00000488484 U2SURPO15042 1029 aaKnown RBP20.38■□□□□ 0.85
RANBP1-214ENST00000488484 ASAP1Q9ULH1 1129 aa20.38■□□□□ 0.85
RANBP1-214ENST00000488484 COL3A1P02461 1466 aaPredicted RBP20.37■□□□□ 0.85
RANBP1-214ENST00000488484 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
RANBP1-214ENST00000488484 BCS1LQ9Y276 419 aa20.37■□□□□ 0.85
RANBP1-214ENST00000488484 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
RANBP1-214ENST00000488484 TOMM70O94826 608 aa20.36■□□□□ 0.85
RANBP1-214ENST00000488484 PRKRIP1Q9H875 184 aaPredicted RBP20.36■□□□□ 0.85
RANBP1-214ENST00000488484 IFNL2Q8IZJ0 200 aa20.35■□□□□ 0.85
RANBP1-214ENST00000488484 WDR90Q96KV7 1748 aa20.34■□□□□ 0.85
RANBP1-214ENST00000488484 HSP90AB1P08238 724 aaKnown RBP20.34■□□□□ 0.85
RANBP1-214ENST00000488484 TGFB2P61812 414 aa20.34■□□□□ 0.85
RANBP1-214ENST00000488484 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
RANBP1-214ENST00000488484 C4AP0C0L4 1744 aa20.33■□□□□ 0.85
RANBP1-214ENST00000488484 BRCA1P38398 1863 aaKnown RBP20.33■□□□□ 0.85
RANBP1-214ENST00000488484 A0A0G2JLW4 131 aa20.33■□□□□ 0.85
RANBP1-214ENST00000488484 HMOX1P09601 288 aa20.33■□□□□ 0.85
RANBP1-214ENST00000488484 NMRK2Q9NPI5 230 aa20.33■□□□□ 0.85
RANBP1-214ENST00000488484 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
RANBP1-214ENST00000488484 PHKG2P15735 406 aa20.32■□□□□ 0.84
RANBP1-214ENST00000488484 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
RANBP1-214ENST00000488484 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
RANBP1-214ENST00000488484 ARHGAP27Q6ZUM4 889 aa20.32■□□□□ 0.84
RANBP1-214ENST00000488484 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
RANBP1-214ENST00000488484 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
RANBP1-214ENST00000488484 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
RANBP1-214ENST00000488484 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
RANBP1-214ENST00000488484 COL5A3P25940 1745 aaPredicted RBP20.31■□□□□ 0.84
RANBP1-214ENST00000488484 ANP32CO43423 234 aa20.31■□□□□ 0.84
RANBP1-214ENST00000488484 PNNQ9H307 717 aaKnown RBP20.31■□□□□ 0.84
RANBP1-214ENST00000488484 FCHSD2O94868 740 aa20.3■□□□□ 0.84
RANBP1-214ENST00000488484 TRAPPC3LQ5T215 181 aa20.3■□□□□ 0.84
RANBP1-214ENST00000488484 NLGN1Q8N2Q7 840 aa20.3■□□□□ 0.84
RANBP1-214ENST00000488484 CCDC87Q9NVE4 849 aa20.3■□□□□ 0.84
RANBP1-214ENST00000488484 NEFMP07197 916 aa20.29■□□□□ 0.84
RANBP1-214ENST00000488484 DPEP1P16444 411 aa20.29■□□□□ 0.84
RANBP1-214ENST00000488484 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
RANBP1-214ENST00000488484 ARFGEF1Q9Y6D6 1849 aa20.29■□□□□ 0.84
RANBP1-214ENST00000488484 ADRA2BP18089 450 aa20.27■□□□□ 0.84
RANBP1-214ENST00000488484 RBM46Q8TBY0 533 aaKnown RBP20.27■□□□□ 0.84
RANBP1-214ENST00000488484 DCAF5Q96JK2 942 aa20.27■□□□□ 0.84
RANBP1-214ENST00000488484 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
RANBP1-214ENST00000488484 GYS1P13807 737 aa20.26■□□□□ 0.83
RANBP1-214ENST00000488484 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
RANBP1-214ENST00000488484 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
RANBP1-214ENST00000488484 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
RANBP1-214ENST00000488484 ARHGEF1Q92888 912 aaKnown RBP20.26■□□□□ 0.83
RANBP1-214ENST00000488484 SLC4A9Q96Q91 983 aa20.26■□□□□ 0.83
RANBP1-214ENST00000488484 PARP3Q9Y6F1 533 aa20.26■□□□□ 0.83
RANBP1-214ENST00000488484 CNTNAP4Q9C0A0 1308 aa20.26■□□□□ 0.83
RANBP1-214ENST00000488484 RFC4P35249 363 aa20.25■□□□□ 0.83
RANBP1-214ENST00000488484 C9orf131Q5VYM1 1079 aa20.25■□□□□ 0.83
RANBP1-214ENST00000488484 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
RANBP1-214ENST00000488484 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
RANBP1-214ENST00000488484 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
RANBP1-214ENST00000488484 KCPQ6ZWJ8 1503 aa20.23■□□□□ 0.83
RANBP1-214ENST00000488484 MYH14Q7Z406 1995 aaKnown RBP20.23■□□□□ 0.83
RANBP1-214ENST00000488484 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
RANBP1-214ENST00000488484 HTRA3P83110 453 aa20.23■□□□□ 0.83
RANBP1-214ENST00000488484 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
RANBP1-214ENST00000488484 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
RANBP1-214ENST00000488484 MTHFSDQ2M296 383 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms