RNA–Protein interactions for RNA: ENST00000488359.1

WIPI2-213, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 3

Gene WIPI2, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-213ENST00000488359 POLD1P28340 1107 aa12.21□□□□□ -0.45
WIPI2-213ENST00000488359 CABP4P57796 275 aa12.21□□□□□ -0.45
WIPI2-213ENST00000488359 HMOX1P09601 288 aa12.2□□□□□ -0.46
WIPI2-213ENST00000488359 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
WIPI2-213ENST00000488359 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
WIPI2-213ENST00000488359 AK7Q96M32 723 aa12.2□□□□□ -0.46
WIPI2-213ENST00000488359 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
WIPI2-213ENST00000488359 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
WIPI2-213ENST00000488359 ITGB4P16144 1822 aa12.2□□□□□ -0.46
WIPI2-213ENST00000488359 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
WIPI2-213ENST00000488359 ITPK1Q13572 414 aa12.19□□□□□ -0.46
WIPI2-213ENST00000488359 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
WIPI2-213ENST00000488359 QSER1Q2KHR3 1735 aa12.19□□□□□ -0.46
WIPI2-213ENST00000488359 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
WIPI2-213ENST00000488359 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
WIPI2-213ENST00000488359 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
WIPI2-213ENST00000488359 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
WIPI2-213ENST00000488359 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
WIPI2-213ENST00000488359 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
WIPI2-213ENST00000488359 C5P01031 1676 aa12.16□□□□□ -0.46
WIPI2-213ENST00000488359 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
WIPI2-213ENST00000488359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
WIPI2-213ENST00000488359 SSFA2P28290 1259 aa12.16□□□□□ -0.46
WIPI2-213ENST00000488359 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
WIPI2-213ENST00000488359 AMIGO3Q86WK7 504 aa12.16□□□□□ -0.46
WIPI2-213ENST00000488359 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
WIPI2-213ENST00000488359 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
WIPI2-213ENST00000488359 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
WIPI2-213ENST00000488359 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
WIPI2-213ENST00000488359 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
WIPI2-213ENST00000488359 SLC52A2Q9HAB3 445 aa12.15□□□□□ -0.46
WIPI2-213ENST00000488359 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
WIPI2-213ENST00000488359 UTRNP46939 3433 aa12.15□□□□□ -0.46
WIPI2-213ENST00000488359 GNPATO15228 680 aa12.14□□□□□ -0.47
WIPI2-213ENST00000488359 PHF14O94880 888 aa12.14□□□□□ -0.47
WIPI2-213ENST00000488359 MSL1Q68DK7 614 aa12.14□□□□□ -0.47
WIPI2-213ENST00000488359 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
WIPI2-213ENST00000488359 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
WIPI2-213ENST00000488359 TRAPPC3LQ5T215 181 aa12.13□□□□□ -0.47
WIPI2-213ENST00000488359 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
WIPI2-213ENST00000488359 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
WIPI2-213ENST00000488359 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
WIPI2-213ENST00000488359 COL24A1Q17RW2 1714 aa12.13□□□□□ -0.47
WIPI2-213ENST00000488359 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
WIPI2-213ENST00000488359 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
WIPI2-213ENST00000488359 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
WIPI2-213ENST00000488359 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
WIPI2-213ENST00000488359 RPS6KA4O75676 772 aa12.11□□□□□ -0.47
WIPI2-213ENST00000488359 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
WIPI2-213ENST00000488359 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
WIPI2-213ENST00000488359 FCHSD2O94868 740 aa12.1□□□□□ -0.47
WIPI2-213ENST00000488359 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
WIPI2-213ENST00000488359 YY1P25490 414 aa12.1□□□□□ -0.47
WIPI2-213ENST00000488359 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
WIPI2-213ENST00000488359 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.472e-29■■■■■ 68.5
WIPI2-213ENST00000488359 PHACTR3Q96KR7 559 aa12.1□□□□□ -0.47
WIPI2-213ENST00000488359 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
WIPI2-213ENST00000488359 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
WIPI2-213ENST00000488359 SLC39A6Q13433 755 aa12.09□□□□□ -0.47
WIPI2-213ENST00000488359 GPR162Q16538 588 aa12.09□□□□□ -0.47
WIPI2-213ENST00000488359 NLGN1Q8N2Q7 840 aa12.09□□□□□ -0.47
WIPI2-213ENST00000488359 IL17REQ8NFR9 667 aa12.09□□□□□ -0.47
WIPI2-213ENST00000488359 NLGN2Q8NFZ4 835 aa12.09□□□□□ -0.47
WIPI2-213ENST00000488359 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
WIPI2-213ENST00000488359 MRC1P22897 1456 aa12.08□□□□□ -0.47
WIPI2-213ENST00000488359 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
WIPI2-213ENST00000488359 SCN11AQ9UI33 1791 aa12.08□□□□□ -0.48
WIPI2-213ENST00000488359 RFC4P35249 363 aa12.08□□□□□ -0.48
WIPI2-213ENST00000488359 TEFQ10587 303 aa12.08□□□□□ -0.48
WIPI2-213ENST00000488359 INTS5Q6P9B9 1019 aaKnown RBP12.08□□□□□ -0.48
WIPI2-213ENST00000488359 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
WIPI2-213ENST00000488359 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
WIPI2-213ENST00000488359 DNAJC10Q8IXB1 793 aa12.07□□□□□ -0.48
WIPI2-213ENST00000488359 TTC5Q8N0Z6 440 aa12.07□□□□□ -0.48
WIPI2-213ENST00000488359 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
WIPI2-213ENST00000488359 MMP10P09238 476 aa12.06□□□□□ -0.48
WIPI2-213ENST00000488359 CYP19A1P11511 503 aaPredicted RBP12.06□□□□□ -0.48
WIPI2-213ENST00000488359 GYS1P13807 737 aa12.06□□□□□ -0.48
WIPI2-213ENST00000488359 RALBP1Q15311 655 aa12.06□□□□□ -0.48
WIPI2-213ENST00000488359 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
WIPI2-213ENST00000488359 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
WIPI2-213ENST00000488359 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
WIPI2-213ENST00000488359 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
WIPI2-213ENST00000488359 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
WIPI2-213ENST00000488359 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
WIPI2-213ENST00000488359 GRIN3BO60391 1043 aa12.04□□□□□ -0.48
WIPI2-213ENST00000488359 STARD3NLO95772 234 aa12.04□□□□□ -0.48
WIPI2-213ENST00000488359 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
WIPI2-213ENST00000488359 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
WIPI2-213ENST00000488359 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
WIPI2-213ENST00000488359 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
WIPI2-213ENST00000488359 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
WIPI2-213ENST00000488359 NEFMP07197 916 aa12.03□□□□□ -0.48
WIPI2-213ENST00000488359 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
WIPI2-213ENST00000488359 SOS1Q07889 1333 aaPredicted RBP12.03□□□□□ -0.48
WIPI2-213ENST00000488359 USP42Q9H9J4 1324 aaKnown RBP12.03□□□□□ -0.48
WIPI2-213ENST00000488359 CICQ96RK0 1608 aaPredicted RBP12.03□□□□□ -0.48
WIPI2-213ENST00000488359 MYH14Q7Z406 1995 aaKnown RBP12.02□□□□□ -0.49
WIPI2-213ENST00000488359 ZPR1O75312 459 aa12.02□□□□□ -0.49
WIPI2-213ENST00000488359 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.493e-7■□□□□ 9.7
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms