RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 SMIM5Q71RC9 77 aa27.56■■■□□ 2
TRIM8-204ENST00000487927 ZNF831Q5JPB2 1677 aa27.56■■■□□ 2
TRIM8-204ENST00000487927 ERVV-2B6SEH9 535 aa27.55■■■□□ 2
TRIM8-204ENST00000487927 AMOTQ4VCS5 1084 aa27.55■■■□□ 2
TRIM8-204ENST00000487927 SULT6B1Q6IMI4 303 aa27.55■■■□□ 2
TRIM8-204ENST00000487927 DCAF5Q96JK2 942 aa27.55■■■□□ 2
TRIM8-204ENST00000487927 HSP90AB1P08238 724 aaKnown RBP27.54■■■□□ 2
TRIM8-204ENST00000487927 NLGN2Q8NFZ4 835 aa27.54■■■□□ 2
TRIM8-204ENST00000487927 ATP6V1AP38606 617 aa27.52■■■□□ 2
TRIM8-204ENST00000487927 MTHFSP49914 203 aa27.52■■■□□ 2
TRIM8-204ENST00000487927 SCN11AQ9UI33 1791 aa27.51■■□□□ 1.99
TRIM8-204ENST00000487927 COL5A3P25940 1745 aaPredicted RBP27.51■■□□□ 1.99
TRIM8-204ENST00000487927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.51■■□□□ 1.99
TRIM8-204ENST00000487927 PHF14O94880 888 aa27.51■■□□□ 1.99
TRIM8-204ENST00000487927 SLC4A9Q96Q91 983 aa27.51■■□□□ 1.99
TRIM8-204ENST00000487927 SSFA2P28290 1259 aa27.49■■□□□ 1.99
TRIM8-204ENST00000487927 CC2D1BQ5T0F9 858 aaKnown RBP27.49■■□□□ 1.99
TRIM8-204ENST00000487927 GPR162Q16538 588 aa27.48■■□□□ 1.99
TRIM8-204ENST00000487927 VIRMAQ69YN4 1812 aaKnown RBP27.48■■□□□ 1.99
TRIM8-204ENST00000487927 C1orf141Q5JVX7 400 aa27.47■■□□□ 1.99
TRIM8-204ENST00000487927 DIEXFQ68CQ4 756 aaKnown RBP27.47■■□□□ 1.99
TRIM8-204ENST00000487927 GNPATO15228 680 aa27.46■■□□□ 1.99
TRIM8-204ENST00000487927 CABP4P57796 275 aa27.46■■□□□ 1.99
TRIM8-204ENST00000487927 NPC1L1Q9UHC9 1359 aa27.46■■□□□ 1.99
TRIM8-204ENST00000487927 MYH14Q7Z406 1995 aaKnown RBP27.45■■□□□ 1.98
TRIM8-204ENST00000487927 RBM42Q9BTD8 480 aaKnown RBP27.44■■□□□ 1.98
TRIM8-204ENST00000487927 COL3A1P02461 1466 aaPredicted RBP27.43■■□□□ 1.98
TRIM8-204ENST00000487927 HMOX1P09601 288 aa27.42■■□□□ 1.98
TRIM8-204ENST00000487927 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
TRIM8-204ENST00000487927 NFATC2IPQ8NCF5 419 aa27.42■■□□□ 1.98
TRIM8-204ENST00000487927 ZNF784Q8NCA9 323 aaPredicted RBP27.41■■□□□ 1.98
TRIM8-204ENST00000487927 CD2APQ9Y5K6 639 aa27.41■■□□□ 1.98
TRIM8-204ENST00000487927 CICQ96RK0 1608 aaPredicted RBP27.41■■□□□ 1.98
TRIM8-204ENST00000487927 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
TRIM8-204ENST00000487927 YBX3P16989 372 aaKnown RBP eCLIP27.4■■□□□ 1.98
TRIM8-204ENST00000487927 AKAP4Q5JQC9 854 aa27.4■■□□□ 1.98
TRIM8-204ENST00000487927 TJP1Q07157 1748 aa27.4■■□□□ 1.98
TRIM8-204ENST00000487927 DIAPH1O60610 1272 aaKnown RBP27.39■■□□□ 1.98
TRIM8-204ENST00000487927 ADAMTS7Q9UKP4 1686 aa27.39■■□□□ 1.97
TRIM8-204ENST00000487927 RC3H1Q5TC82 1133 aaKnown RBP27.38■■□□□ 1.97
TRIM8-204ENST00000487927 CNTNAP4Q9C0A0 1308 aa27.38■■□□□ 1.97
TRIM8-204ENST00000487927 MRC1P22897 1456 aa27.38■■□□□ 1.97
TRIM8-204ENST00000487927 C4AP0C0L4 1744 aa27.37■■□□□ 1.97
TRIM8-204ENST00000487927 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
TRIM8-204ENST00000487927 RTCBQ9Y3I0 505 aaKnown RBP27.37■■□□□ 1.97
TRIM8-204ENST00000487927 PTCD1O75127 700 aaKnown RBP27.36■■□□□ 1.97
TRIM8-204ENST00000487927 LGR6Q9HBX8 967 aa27.36■■□□□ 1.97
TRIM8-204ENST00000487927 MTHFSDQ2M296 383 aaKnown RBP27.34■■□□□ 1.97
TRIM8-204ENST00000487927 TRAPPC3LQ5T215 181 aa27.34■■□□□ 1.97
TRIM8-204ENST00000487927 SLC52A2Q9HAB3 445 aa27.34■■□□□ 1.97
TRIM8-204ENST00000487927 KIF13BQ9NQT8 1826 aa27.33■■□□□ 1.97
TRIM8-204ENST00000487927 RNMTO43148 476 aaKnown RBP27.33■■□□□ 1.97
TRIM8-204ENST00000487927 RPS6KA4O75676 772 aa27.33■■□□□ 1.97
TRIM8-204ENST00000487927 ARHGEF1Q92888 912 aaKnown RBP27.33■■□□□ 1.97
TRIM8-204ENST00000487927 ADRA2BP18089 450 aa27.31■■□□□ 1.96
TRIM8-204ENST00000487927 GRIN3BO60391 1043 aa27.3■■□□□ 1.96
TRIM8-204ENST00000487927 MMP10P09238 476 aa27.3■■□□□ 1.96
TRIM8-204ENST00000487927 KIAA1551Q9HCM1 1747 aa27.3■■□□□ 1.96
TRIM8-204ENST00000487927 CRKLP46109 303 aaKnown RBP27.29■■□□□ 1.96
TRIM8-204ENST00000487927 KCPQ6ZWJ8 1503 aa27.28■■□□□ 1.96
TRIM8-204ENST00000487927 GYS1P13807 737 aa27.27■■□□□ 1.96
TRIM8-204ENST00000487927 UBR2Q8IWV8 1755 aa27.27■■□□□ 1.96
TRIM8-204ENST00000487927 U2SURPO15042 1029 aaKnown RBP27.26■■□□□ 1.95
TRIM8-204ENST00000487927 SLC39A6Q13433 755 aa27.26■■□□□ 1.95
TRIM8-204ENST00000487927 NLGN1Q8N2Q7 840 aa27.26■■□□□ 1.95
TRIM8-204ENST00000487927 RFC4P35249 363 aa27.25■■□□□ 1.95
TRIM8-204ENST00000487927 N4BP2Q86UW6 1770 aaPredicted RBP27.25■■□□□ 1.95
TRIM8-204ENST00000487927 INTS5Q6P9B9 1019 aaKnown RBP27.24■■□□□ 1.95
TRIM8-204ENST00000487927 DNAJC10Q8IXB1 793 aa27.24■■□□□ 1.95
TRIM8-204ENST00000487927 SIPA1L3O60292 1781 aaPredicted RBP27.23■■□□□ 1.95
TRIM8-204ENST00000487927 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
TRIM8-204ENST00000487927 PXDNLA1KZ92 1463 aa27.22■■□□□ 1.95
TRIM8-204ENST00000487927 C10orf71Q711Q0 1435 aa27.22■■□□□ 1.95
TRIM8-204ENST00000487927 SRP68Q9UHB9 627 aaKnown RBP27.21■■□□□ 1.95
TRIM8-204ENST00000487927 USP42Q9H9J4 1324 aaKnown RBP27.2■■□□□ 1.95
TRIM8-204ENST00000487927 CYP19A1P11511 503 aaPredicted RBP27.18■■□□□ 1.94
TRIM8-204ENST00000487927 PPP2R1AP30153 589 aa27.18■■□□□ 1.94
TRIM8-204ENST00000487927 GAS2L2Q8NHY3 880 aa27.18■■□□□ 1.94
TRIM8-204ENST00000487927 CCDC87Q9NVE4 849 aa27.18■■□□□ 1.94
TRIM8-204ENST00000487927 BRCA1P38398 1863 aaKnown RBP27.17■■□□□ 1.94
TRIM8-204ENST00000487927 IL17REQ8NFR9 667 aa27.17■■□□□ 1.94
TRIM8-204ENST00000487927 CFAP53Q96M91 514 aa27.17■■□□□ 1.94
TRIM8-204ENST00000487927 SOS1Q07889 1333 aaPredicted RBP27.16■■□□□ 1.94
TRIM8-204ENST00000487927 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
TRIM8-204ENST00000487927 FKBP8Q14318 412 aa27.16■■□□□ 1.94
TRIM8-204ENST00000487927 PHACTR3Q96KR7 559 aa27.16■■□□□ 1.94
TRIM8-204ENST00000487927 RSPH6AQ9H0K4 717 aa27.16■■□□□ 1.94
TRIM8-204ENST00000487927 TGFB2P61812 414 aa27.15■■□□□ 1.94
TRIM8-204ENST00000487927 PARP3Q9Y6F1 533 aa27.15■■□□□ 1.94
TRIM8-204ENST00000487927 PRKAR2BP31323 418 aa27.14■■□□□ 1.94
TRIM8-204ENST00000487927 VSIG10Q8N0Z9 540 aa27.14■■□□□ 1.94
TRIM8-204ENST00000487927 DDR1Q08345 913 aa27.13■■□□□ 1.93
TRIM8-204ENST00000487927 ZBTB1Q9Y2K1 713 aa27.13■■□□□ 1.93
TRIM8-204ENST00000487927 ADCY9O60503 1353 aa27.12■■□□□ 1.93
TRIM8-204ENST00000487927 A0A0G2JLW4 131 aa27.12■■□□□ 1.93
TRIM8-204ENST00000487927 CEMIPQ8WUJ3 1361 aa27.11■■□□□ 1.93
TRIM8-204ENST00000487927 ATP10DQ9P241 1426 aa27.11■■□□□ 1.93
TRIM8-204ENST00000487927 TEFQ10587 303 aa27.11■■□□□ 1.93
TRIM8-204ENST00000487927 COL15A1P39059 1388 aa27.1■■□□□ 1.93
TRIM8-204ENST00000487927 USPL1Q5W0Q7 1092 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms