RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GMCL1Q96IK5 515 aa9.98□□□□□ -0.81
SMC4-219ENST00000487747 KCNMA1Q12791 1236 aa9.97□□□□□ -0.81
SMC4-219ENST00000487747 H7C1W4 665 aa9.96□□□□□ -0.82
SMC4-219ENST00000487747 TMEM214Q6NUQ4 689 aaKnown RBP9.96□□□□□ -0.82
SMC4-219ENST00000487747 NUCKS1Q9H1E3 243 aaKnown RBP9.96□□□□□ -0.82
SMC4-219ENST00000487747 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
SMC4-219ENST00000487747 IGF1RP08069 1367 aa9.96□□□□□ -0.82
SMC4-219ENST00000487747 CELA2BP08218 269 aaPredicted RBP9.95□□□□□ -0.82
SMC4-219ENST00000487747 ESCO1Q5FWF5 840 aa9.95□□□□□ -0.82
SMC4-219ENST00000487747 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
SMC4-219ENST00000487747 RUBCNLQ9H714 662 aa9.94□□□□□ -0.82
SMC4-219ENST00000487747 INHAP05111 366 aa9.93□□□□□ -0.82
SMC4-219ENST00000487747 GDF10P55107 478 aa9.93□□□□□ -0.82
SMC4-219ENST00000487747 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
SMC4-219ENST00000487747 TLR1Q15399 786 aa9.93□□□□□ -0.82
SMC4-219ENST00000487747 MAP7D1Q3KQU3 841 aa9.93□□□□□ -0.82
SMC4-219ENST00000487747 GNASQ5JWF2 1037 aa9.93□□□□□ -0.82
SMC4-219ENST00000487747 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
SMC4-219ENST00000487747 ALG2Q9H553 416 aa9.93□□□□□ -0.82
SMC4-219ENST00000487747 A0A1B0GTH6 734 aa9.92□□□□□ -0.82
SMC4-219ENST00000487747 MSX1P28360 303 aa9.92□□□□□ -0.82
SMC4-219ENST00000487747 RASSF7Q02833 373 aa9.92□□□□□ -0.82
SMC4-219ENST00000487747 RHBDD1Q8TEB9 315 aa9.92□□□□□ -0.82
SMC4-219ENST00000487747 ACDQ96AP0 544 aa9.92□□□□□ -0.82
SMC4-219ENST00000487747 TMEM229AB2RXF0 380 aa9.91□□□□□ -0.82
SMC4-219ENST00000487747 SOX11P35716 441 aa9.91□□□□□ -0.82
SMC4-219ENST00000487747 SIRT1Q96EB6 747 aa9.91□□□□□ -0.82
SMC4-219ENST00000487747 TRERF1Q96PN7 1200 aa9.91□□□□□ -0.82
SMC4-219ENST00000487747 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
SMC4-219ENST00000487747 POM121CA8CG34 1229 aa9.9□□□□□ -0.82
SMC4-219ENST00000487747 MX2P20592 715 aa9.9□□□□□ -0.82
SMC4-219ENST00000487747 KCTD17Q8N5Z5 321 aa9.9□□□□□ -0.82
SMC4-219ENST00000487747 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
SMC4-219ENST00000487747 USP3Q9Y6I4 520 aa9.9□□□□□ -0.82
SMC4-219ENST00000487747 GTF2E1P29083 439 aaPredicted RBP9.89□□□□□ -0.83
SMC4-219ENST00000487747 IRS1P35568 1242 aa9.89□□□□□ -0.83
SMC4-219ENST00000487747 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
SMC4-219ENST00000487747 GDF11O95390 407 aa9.88□□□□□ -0.83
SMC4-219ENST00000487747 SKIP12755 728 aa9.88□□□□□ -0.83
SMC4-219ENST00000487747 PLA2G4AP47712 749 aa9.88□□□□□ -0.83
SMC4-219ENST00000487747 TMEM151AQ8N4L1 468 aa9.88□□□□□ -0.83
SMC4-219ENST00000487747 SMTNP53814 917 aa9.87□□□□□ -0.83
SMC4-219ENST00000487747 MARSP56192 900 aaKnown RBP9.87□□□□□ -0.83
SMC4-219ENST00000487747 MAP3K10Q02779 954 aa9.87□□□□□ -0.83
SMC4-219ENST00000487747 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
SMC4-219ENST00000487747 DEPDC4Q8N2C3 294 aa9.87□□□□□ -0.83
SMC4-219ENST00000487747 BCRP11274 1271 aa9.86□□□□□ -0.83
SMC4-219ENST00000487747 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
SMC4-219ENST00000487747 CSB-PGBD3P0DP91 1061 aa9.85□□□□□ -0.83
SMC4-219ENST00000487747 NCOA4Q13772 614 aa9.85□□□□□ -0.83
SMC4-219ENST00000487747 PGBD3Q8N328 593 aa9.85□□□□□ -0.83
SMC4-219ENST00000487747 ABHD17AQ96GS6 310 aa9.85□□□□□ -0.83
SMC4-219ENST00000487747 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
SMC4-219ENST00000487747 IQSEC3Q9UPP2 1182 aaPredicted RBP9.85□□□□□ -0.83
SMC4-219ENST00000487747 CNTNAP5Q8WYK1 1306 aa9.84□□□□□ -0.83
SMC4-219ENST00000487747 C2CD2LO14523 706 aa9.84□□□□□ -0.83
SMC4-219ENST00000487747 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
SMC4-219ENST00000487747 ATP4AP20648 1035 aa9.84□□□□□ -0.83
SMC4-219ENST00000487747 C1orf229Q6ZS94 237 aaPredicted RBP9.84□□□□□ -0.83
SMC4-219ENST00000487747 AIDAQ96BJ3 306 aa9.84□□□□□ -0.83
SMC4-219ENST00000487747 DNAAF2Q9NVR5 837 aaKnown RBP9.84□□□□□ -0.83
SMC4-219ENST00000487747 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
SMC4-219ENST00000487747 RNF225M0QZC1 329 aaPredicted RBP9.83□□□□□ -0.84
SMC4-219ENST00000487747 RAD21O60216 631 aa9.83□□□□□ -0.84
SMC4-219ENST00000487747 BNIP3LO60238 219 aa9.83□□□□□ -0.84
SMC4-219ENST00000487747 MTFR1Q15390 333 aa9.83□□□□□ -0.84
SMC4-219ENST00000487747 EML3Q32P44 896 aa9.83□□□□□ -0.84
SMC4-219ENST00000487747 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMC4-219ENST00000487747 CRISPLD1Q9H336 500 aa9.83□□□□□ -0.84
SMC4-219ENST00000487747 NDFIP2Q9NV92 336 aa9.83□□□□□ -0.84
SMC4-219ENST00000487747 A6NJY4 79 aa9.82□□□□□ -0.84
SMC4-219ENST00000487747 GTF2IP78347 998 aa9.82□□□□□ -0.84
SMC4-219ENST00000487747 CTBSQ01459 385 aa9.82□□□□□ -0.84
SMC4-219ENST00000487747 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
SMC4-219ENST00000487747 KLRG1Q96E93 195 aa9.82□□□□□ -0.84
SMC4-219ENST00000487747 OXCT2Q9BYC2 517 aaPredicted RBP9.82□□□□□ -0.84
SMC4-219ENST00000487747 NIFKQ9BYG3 293 aaKnown RBP9.82□□□□□ -0.84
SMC4-219ENST00000487747 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 LBRQ14739 615 aaKnown RBP9.81□□□□□ -0.84
SMC4-219ENST00000487747 EFHC2Q5JST6 749 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 SCARF2Q96GP6 870 aaPredicted RBP9.81□□□□□ -0.84
SMC4-219ENST00000487747 UCN2Q96RP3 112 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 ENAMQ9NRM1 1142 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 NOD1Q9Y239 953 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
SMC4-219ENST00000487747 CDK2AP1O14519 115 aa9.8□□□□□ -0.84
SMC4-219ENST00000487747 OIP5O43482 229 aa9.8□□□□□ -0.84
SMC4-219ENST00000487747 FLIIQ13045 1269 aa9.8□□□□□ -0.84
SMC4-219ENST00000487747 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
SMC4-219ENST00000487747 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
SMC4-219ENST00000487747 ZCCHC2Q9C0B9 1178 aaKnown RBP9.8□□□□□ -0.84
SMC4-219ENST00000487747 ZNF358Q9NW07 568 aa9.8□□□□□ -0.84
SMC4-219ENST00000487747 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
SMC4-219ENST00000487747 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
SMC4-219ENST00000487747 SHISA8B8ZZ34 492 aa9.79□□□□□ -0.84
SMC4-219ENST00000487747 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
SMC4-219ENST00000487747 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
SMC4-219ENST00000487747 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
SMC4-219ENST00000487747 FGFR3P22607 806 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms