RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
HMGN1-216ENST00000486741 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
HMGN1-216ENST00000486741 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
HMGN1-216ENST00000486741 H3BQV1 296 aa16■□□□□ 0.15
HMGN1-216ENST00000486741 WASHC4Q2M389 1173 aa16■□□□□ 0.15
HMGN1-216ENST00000486741 IFFO2Q5TF58 517 aa16■□□□□ 0.15
HMGN1-216ENST00000486741 FAM184AQ8NB25 1140 aa16■□□□□ 0.15
HMGN1-216ENST00000486741 KAT6BQ8WYB5 2073 aa16■□□□□ 0.15
HMGN1-216ENST00000486741 PLEKHG3A1L390 1219 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 CHL1O00533 1208 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 CEP85Q6P2H3 762 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 BOLA2Q9H3K6 86 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
HMGN1-216ENST00000486741 RNF20Q5VTR2 975 aa15.98■□□□□ 0.15
HMGN1-216ENST00000486741 KDM4AO75164 1064 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 STK3Q13188 491 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 CFAP74Q9C0B2 1584 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
HMGN1-216ENST00000486741 SSFA2P28290 1259 aa15.96■□□□□ 0.15
HMGN1-216ENST00000486741 CEP152O94986 1710 aa15.96■□□□□ 0.15
HMGN1-216ENST00000486741 CWF19L2Q2TBE0 894 aaKnown RBP15.96■□□□□ 0.14
HMGN1-216ENST00000486741 ERC1Q8IUD2 1116 aa15.96■□□□□ 0.14
HMGN1-216ENST00000486741 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.14
HMGN1-216ENST00000486741 PDE1AP54750 535 aa15.95■□□□□ 0.14
HMGN1-216ENST00000486741 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
HMGN1-216ENST00000486741 ZBTB3Q9H5J0 574 aa15.95■□□□□ 0.14
HMGN1-216ENST00000486741 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
HMGN1-216ENST00000486741 MSH6P52701 1360 aa15.95■□□□□ 0.14
HMGN1-216ENST00000486741 ABCA6Q8N139 1617 aa15.95■□□□□ 0.14
HMGN1-216ENST00000486741 ARID3AQ99856 593 aa15.94■□□□□ 0.14
HMGN1-216ENST00000486741 IP6K1Q92551 441 aa15.94■□□□□ 0.14
HMGN1-216ENST00000486741 FIBPO43427 364 aa15.94■□□□□ 0.14
HMGN1-216ENST00000486741 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
HMGN1-216ENST00000486741 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
HMGN1-216ENST00000486741 UBE3BQ7Z3V4 1068 aa15.94■□□□□ 0.14
HMGN1-216ENST00000486741 JAKMIP1Q96N16 626 aaKnown RBP15.94■□□□□ 0.14
HMGN1-216ENST00000486741 TNPO1Q92973 898 aaKnown RBP15.93■□□□□ 0.14
HMGN1-216ENST00000486741 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
HMGN1-216ENST00000486741 A0A087WZG4 1122 aa15.93■□□□□ 0.14
HMGN1-216ENST00000486741 KCNQ3O43525 872 aa15.93■□□□□ 0.14
HMGN1-216ENST00000486741 FKBP4Q02790 459 aaKnown RBP eCLIP15.93■□□□□ 0.14
HMGN1-216ENST00000486741 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
HMGN1-216ENST00000486741 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
HMGN1-216ENST00000486741 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 SBNO1A3KN83 1393 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
HMGN1-216ENST00000486741 SF3A1Q15459 793 aaKnown RBP15.92■□□□□ 0.14
HMGN1-216ENST00000486741 IFNL2Q8IZJ0 200 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 AKAP4Q5JQC9 854 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
HMGN1-216ENST00000486741 XAGE3Q8WTP9 111 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 C19orf44Q9H6X5 657 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
HMGN1-216ENST00000486741 ADAMTS2O95450 1211 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 CADPS2Q86UW7 1296 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 PKNOX2Q96KN3 472 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 MPNDQ8N594 471 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 GLRX3O76003 335 aaKnown RBP15.91■□□□□ 0.14
HMGN1-216ENST00000486741 HYPKQ9NX55 129 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 ARHGAP31Q2M1Z3 1444 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 CASTP20810 708 aaKnown RBP15.91■□□□□ 0.14
HMGN1-216ENST00000486741 ATP8B2P98198 1209 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
HMGN1-216ENST00000486741 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
HMGN1-216ENST00000486741 STK11IPQ8N1F8 1099 aa15.9■□□□□ 0.14
HMGN1-216ENST00000486741 FBXW7Q969H0 707 aa15.9■□□□□ 0.14
HMGN1-216ENST00000486741 CYP46A1Q9Y6A2 500 aa15.9■□□□□ 0.14
HMGN1-216ENST00000486741 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
HMGN1-216ENST00000486741 RAB11FIP3O75154 756 aa15.9■□□□□ 0.14
HMGN1-216ENST00000486741 USP19O94966 1318 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 CSPP1Q1MSJ5 1256 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 CCDC57Q2TAC2 916 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 FMNL2Q96PY5 1086 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 CNNM1Q9NRU3 951 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 GLI2P10070 1586 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 ADGRB3O60242 1522 aa15.89■□□□□ 0.13
HMGN1-216ENST00000486741 CPLX1O14810 134 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 GPTP24298 496 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 MCM2P49736 904 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 MRE11P49959 708 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 CEBPZQ03701 1054 aaKnown RBP15.88■□□□□ 0.13
HMGN1-216ENST00000486741 BICD2Q8TD16 824 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-216ENST00000486741 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
HMGN1-216ENST00000486741 NASPP49321 788 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-216ENST00000486741 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-216ENST00000486741 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 PHF14O94880 888 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 HSP90AA2PQ14568 343 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-216ENST00000486741 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
HMGN1-216ENST00000486741 INO80Q9ULG1 1556 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-216ENST00000486741 DTNBO60941 627 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms