RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 GNPATO15228 680 aa12.07□□□□□ -0.48
APTX-228ENST00000486724 VEGFBP49765 207 aa12.07□□□□□ -0.48
APTX-228ENST00000486724 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
APTX-228ENST00000486724 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
APTX-228ENST00000486724 LMNB1P20700 586 aa12.06□□□□□ -0.48
APTX-228ENST00000486724 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
APTX-228ENST00000486724 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
APTX-228ENST00000486724 MAP2P11137 1827 aaKnown RBP12.05□□□□□ -0.48
APTX-228ENST00000486724 TMF1P82094 1093 aa12.05□□□□□ -0.48
APTX-228ENST00000486724 LINC00116Q8NCU8 138 aa12.05□□□□□ -0.48
APTX-228ENST00000486724 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
APTX-228ENST00000486724 CGNL1Q0VF96 1302 aa12.05□□□□□ -0.48
APTX-228ENST00000486724 MAP2K1Q02750 393 aaPredicted RBP12.04□□□□□ -0.48
APTX-228ENST00000486724 RASSF7Q02833 373 aa12.04□□□□□ -0.48
APTX-228ENST00000486724 IP6K1Q92551 441 aa12.04□□□□□ -0.48
APTX-228ENST00000486724 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
APTX-228ENST00000486724 EVC2Q86UK5 1308 aa12.04□□□□□ -0.48
APTX-228ENST00000486724 ITGB4P16144 1822 aa12.04□□□□□ -0.48
APTX-228ENST00000486724 POTECB2RU33 542 aa12.03□□□□□ -0.48
APTX-228ENST00000486724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.03□□□□□ -0.48
APTX-228ENST00000486724 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.48
APTX-228ENST00000486724 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
APTX-228ENST00000486724 SIK1P57059 783 aa12.02□□□□□ -0.49
APTX-228ENST00000486724 PRPF38BQ5VTL8 546 aaKnown RBP12.02□□□□□ -0.49
APTX-228ENST00000486724 PASKQ96RG2 1323 aa12.02□□□□□ -0.49
APTX-228ENST00000486724 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
APTX-228ENST00000486724 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
APTX-228ENST00000486724 TMEM88BA6NKF7 163 aa12.01□□□□□ -0.49
APTX-228ENST00000486724 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
APTX-228ENST00000486724 NME9Q86XW9 330 aa12.01□□□□□ -0.49
APTX-228ENST00000486724 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
APTX-228ENST00000486724 RAB3GAP2Q9H2M9 1393 aa12□□□□□ -0.49
APTX-228ENST00000486724 GYS1P13807 737 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 CHRNA5P30532 468 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 ITPK1Q13572 414 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 RTCBQ9Y3I0 505 aaKnown RBP11.99□□□□□ -0.49
APTX-228ENST00000486724 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 THSD7BQ9C0I4 1608 aa11.99□□□□□ -0.49
APTX-228ENST00000486724 CCDC88AQ3V6T2 1871 aa11.98□□□□□ -0.49
APTX-228ENST00000486724 SBNO2Q9Y2G9 1366 aa11.98□□□□□ -0.49
APTX-228ENST00000486724 RASSF10A6NK89 507 aa11.98□□□□□ -0.49
APTX-228ENST00000486724 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
APTX-228ENST00000486724 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
APTX-228ENST00000486724 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
APTX-228ENST00000486724 WDR33Q9C0J8 1336 aaKnown RBP11.97□□□□□ -0.49
APTX-228ENST00000486724 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
APTX-228ENST00000486724 DEFB115Q30KQ5 88 aa11.97□□□□□ -0.49
APTX-228ENST00000486724 PIGBQ92521 554 aa11.97□□□□□ -0.49
APTX-228ENST00000486724 MCOLN1Q9GZU1 580 aa11.97□□□□□ -0.49
APTX-228ENST00000486724 TATP17735 454 aaPredicted RBP11.96□□□□□ -0.49
APTX-228ENST00000486724 HOXC9P31274 260 aa11.96□□□□□ -0.49
APTX-228ENST00000486724 RFC4P35249 363 aa11.96□□□□□ -0.49
APTX-228ENST00000486724 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
APTX-228ENST00000486724 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
APTX-228ENST00000486724 DLEC1Q9Y238 1755 aa11.95□□□□□ -0.5
APTX-228ENST00000486724 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
APTX-228ENST00000486724 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
APTX-228ENST00000486724 CYP27B1O15528 508 aa11.94□□□□□ -0.5
APTX-228ENST00000486724 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
APTX-228ENST00000486724 MAP3K19Q56UN5 1328 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 IQCA1LA6NCM1 817 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 NFKBIEO00221 500 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
APTX-228ENST00000486724 AMPHP49418 695 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 LTBP1Q14766 1721 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 ZNF831Q5JPB2 1677 aa11.93□□□□□ -0.5
APTX-228ENST00000486724 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
APTX-228ENST00000486724 COL5A3P25940 1745 aaPredicted RBP11.92□□□□□ -0.5
APTX-228ENST00000486724 DDR1Q08345 913 aa11.92□□□□□ -0.5
APTX-228ENST00000486724 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
APTX-228ENST00000486724 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
APTX-228ENST00000486724 KDRP35968 1356 aa11.92□□□□□ -0.5
APTX-228ENST00000486724 SCN4AP35499 1836 aa11.91□□□□□ -0.5
APTX-228ENST00000486724 RC3H1Q5TC82 1133 aaKnown RBP11.91□□□□□ -0.5
APTX-228ENST00000486724 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
APTX-228ENST00000486724 ABT1Q9ULW3 272 aaKnown RBP11.91□□□□□ -0.5
APTX-228ENST00000486724 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
APTX-228ENST00000486724 DGKZQ13574 1117 aa11.9□□□□□ -0.5
APTX-228ENST00000486724 HDGFL2Q7Z4V5 671 aaPredicted RBP11.9□□□□□ -0.5
APTX-228ENST00000486724 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
APTX-228ENST00000486724 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
APTX-228ENST00000486724 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
APTX-228ENST00000486724 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
APTX-228ENST00000486724 DDNO94850 711 aaPredicted RBP11.89□□□□□ -0.51
APTX-228ENST00000486724 KCNA4P22459 653 aa11.89□□□□□ -0.51
APTX-228ENST00000486724 ECE1P42892 770 aa11.89□□□□□ -0.51
APTX-228ENST00000486724 FKBP8Q14318 412 aa11.89□□□□□ -0.51
APTX-228ENST00000486724 NKX1-1Q15270 411 aaPredicted RBP11.89□□□□□ -0.51
APTX-228ENST00000486724 TAF1DQ9H5J8 278 aaPredicted RBP11.89□□□□□ -0.51
APTX-228ENST00000486724 ADAMTSL1Q8N6G6 1762 aa11.88□□□□□ -0.51
APTX-228ENST00000486724 POLRMTO00411 1230 aaKnown RBP11.88□□□□□ -0.51
APTX-228ENST00000486724 CA12O43570 354 aa11.88□□□□□ -0.51
APTX-228ENST00000486724 SOX10P56693 466 aa11.88□□□□□ -0.51
APTX-228ENST00000486724 CAPNS2Q96L46 248 aa11.88□□□□□ -0.51
APTX-228ENST00000486724 ZNF219Q9P2Y4 722 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms