RNA–Protein interactions for RNA: ENST00000486434.1

GABBR1-214, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best)

Gene GABBR1, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-214ENST00000486434 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
GABBR1-214ENST00000486434 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
GABBR1-214ENST00000486434 COL5A3P25940 1745 aaPredicted RBP12.38□□□□□ -0.43
GABBR1-214ENST00000486434 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
GABBR1-214ENST00000486434 NEFMP07197 916 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 KCNQ4P56696 695 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 SIK1P57059 783 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 SPON1Q9HCB6 807 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
GABBR1-214ENST00000486434 SIPA1L3O60292 1781 aaPredicted RBP12.38□□□□□ -0.43
GABBR1-214ENST00000486434 GNAT3A8MTJ3 354 aa12.37□□□□□ -0.43
GABBR1-214ENST00000486434 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
GABBR1-214ENST00000486434 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
GABBR1-214ENST00000486434 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
GABBR1-214ENST00000486434 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
GABBR1-214ENST00000486434 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
GABBR1-214ENST00000486434 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
GABBR1-214ENST00000486434 UBR2Q8IWV8 1755 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 TJP1Q07157 1748 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 AK7Q96M32 723 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
GABBR1-214ENST00000486434 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
GABBR1-214ENST00000486434 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
GABBR1-214ENST00000486434 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
GABBR1-214ENST00000486434 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
GABBR1-214ENST00000486434 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
GABBR1-214ENST00000486434 PDGFDQ9GZP0 370 aaPredicted RBP12.34□□□□□ -0.43
GABBR1-214ENST00000486434 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
GABBR1-214ENST00000486434 PPP1R1BQ9UD71 204 aaPredicted RBP12.34□□□□□ -0.43
GABBR1-214ENST00000486434 TEFQ10587 303 aa12.33□□□□□ -0.44
GABBR1-214ENST00000486434 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
GABBR1-214ENST00000486434 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
GABBR1-214ENST00000486434 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.44
GABBR1-214ENST00000486434 ITPK1Q13572 414 aa12.32□□□□□ -0.44
GABBR1-214ENST00000486434 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
GABBR1-214ENST00000486434 CEMIPQ8WUJ3 1361 aa12.31□□□□□ -0.44
GABBR1-214ENST00000486434 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
GABBR1-214ENST00000486434 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
GABBR1-214ENST00000486434 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
GABBR1-214ENST00000486434 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
GABBR1-214ENST00000486434 SSFA2P28290 1259 aa12.3□□□□□ -0.44
GABBR1-214ENST00000486434 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
GABBR1-214ENST00000486434 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
GABBR1-214ENST00000486434 TTC5Q8N0Z6 440 aa12.3□□□□□ -0.44
GABBR1-214ENST00000486434 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
GABBR1-214ENST00000486434 CNTNAP4Q9C0A0 1308 aa12.3□□□□□ -0.44
GABBR1-214ENST00000486434 GNPATO15228 680 aa12.29□□□□□ -0.44
GABBR1-214ENST00000486434 POLD1P28340 1107 aa12.29□□□□□ -0.44
GABBR1-214ENST00000486434 PTGER2P43116 358 aa12.29□□□□□ -0.44
GABBR1-214ENST00000486434 RC3H1Q5TC82 1133 aaKnown RBP12.29□□□□□ -0.44
GABBR1-214ENST00000486434 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
GABBR1-214ENST00000486434 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
GABBR1-214ENST00000486434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
GABBR1-214ENST00000486434 PHF14O94880 888 aa12.28□□□□□ -0.44
GABBR1-214ENST00000486434 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
GABBR1-214ENST00000486434 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
GABBR1-214ENST00000486434 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
GABBR1-214ENST00000486434 RTCBQ9Y3I0 505 aaKnown RBP12.28□□□□□ -0.44
GABBR1-214ENST00000486434 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.44
GABBR1-214ENST00000486434 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
GABBR1-214ENST00000486434 MCM10Q7L590 875 aa12.27□□□□□ -0.45
GABBR1-214ENST00000486434 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
GABBR1-214ENST00000486434 KDM3BQ7LBC6 1761 aa12.26□□□□□ -0.45
GABBR1-214ENST00000486434 ANP32CO43423 234 aa12.26□□□□□ -0.45
GABBR1-214ENST00000486434 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
GABBR1-214ENST00000486434 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
GABBR1-214ENST00000486434 ARXQ96QS3 562 aa12.26□□□□□ -0.45
GABBR1-214ENST00000486434 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 CRKLP46109 303 aaKnown RBP12.25□□□□□ -0.45
GABBR1-214ENST00000486434 LMOD3Q0VAK6 560 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 DNAJC10Q8IXB1 793 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 TEX13AQ9BXU3 409 aaPredicted RBP12.25□□□□□ -0.45
GABBR1-214ENST00000486434 CCDC87Q9NVE4 849 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 HEG1Q9ULI3 1381 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
GABBR1-214ENST00000486434 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
GABBR1-214ENST00000486434 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
GABBR1-214ENST00000486434 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
GABBR1-214ENST00000486434 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
GABBR1-214ENST00000486434 STARD3NLO95772 234 aa12.23□□□□□ -0.45
GABBR1-214ENST00000486434 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
GABBR1-214ENST00000486434 RFC4P35249 363 aa12.23□□□□□ -0.45
GABBR1-214ENST00000486434 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
GABBR1-214ENST00000486434 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
GABBR1-214ENST00000486434 INTS5Q6P9B9 1019 aaKnown RBP12.23□□□□□ -0.45
GABBR1-214ENST00000486434 ZNF496Q96IT1 587 aaPredicted RBP12.23□□□□□ -0.45
GABBR1-214ENST00000486434 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
GABBR1-214ENST00000486434 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
GABBR1-214ENST00000486434 RIPK4P57078 832 aa12.22□□□□□ -0.45
GABBR1-214ENST00000486434 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
GABBR1-214ENST00000486434 CCDC146Q8IYE0 955 aa12.22□□□□□ -0.45
GABBR1-214ENST00000486434 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms