RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 BCANQ96GW7 911 aa10.53□□□□□ -0.72
SMC4-217ENST00000485867 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
SMC4-217ENST00000485867 C14orf37Q86TY3 774 aa10.52□□□□□ -0.73
SMC4-217ENST00000485867 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
SMC4-217ENST00000485867 QTRT2Q9H974 415 aaKnown RBP10.52□□□□□ -0.73
SMC4-217ENST00000485867 KANK1Q14678 1352 aa10.52□□□□□ -0.73
SMC4-217ENST00000485867 ATF3P18847 181 aa10.51□□□□□ -0.73
SMC4-217ENST00000485867 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
SMC4-217ENST00000485867 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
SMC4-217ENST00000485867 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
SMC4-217ENST00000485867 TMEM131LA2VDJ0 1609 aa10.51□□□□□ -0.73
SMC4-217ENST00000485867 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 ZNF787Q6DD87 383 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 TOR4AQ9NXH8 423 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 LRP5O75197 1615 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 EP400Q96L91 3159 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 PNPLA6Q8IY17 1366 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 DCCP43146 1447 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
SMC4-217ENST00000485867 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
SMC4-217ENST00000485867 TBX22Q9Y458 520 aa10.49□□□□□ -0.73
SMC4-217ENST00000485867 SSTR3P32745 418 aaPredicted RBP10.48□□□□□ -0.73
SMC4-217ENST00000485867 AMHR2Q16671 573 aa10.48□□□□□ -0.73
SMC4-217ENST00000485867 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
SMC4-217ENST00000485867 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
SMC4-217ENST00000485867 SLC52A1Q9NWF4 448 aa10.48□□□□□ -0.73
SMC4-217ENST00000485867 PIK3R4Q99570 1358 aa10.48□□□□□ -0.73
SMC4-217ENST00000485867 MST1RQ04912 1400 aa10.48□□□□□ -0.73
SMC4-217ENST00000485867 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
SMC4-217ENST00000485867 PPP1R15AO75807 674 aaPredicted RBP10.47□□□□□ -0.73
SMC4-217ENST00000485867 TRIM32Q13049 653 aa10.47□□□□□ -0.73
SMC4-217ENST00000485867 RRP7BPQ9NSQ0 103 aa10.47□□□□□ -0.73
SMC4-217ENST00000485867 ABCC5O15440 1437 aa10.47□□□□□ -0.73
SMC4-217ENST00000485867 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
SMC4-217ENST00000485867 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
SMC4-217ENST00000485867 RPRD2Q5VT52 1461 aaKnown RBP10.46□□□□□ -0.74
SMC4-217ENST00000485867 TRPM2O94759 1503 aa10.46□□□□□ -0.74
SMC4-217ENST00000485867 LAMC1P11047 1609 aa10.45□□□□□ -0.74
SMC4-217ENST00000485867 PTPRUQ92729 1446 aa10.45□□□□□ -0.74
SMC4-217ENST00000485867 TTLL12Q14166 644 aaPredicted RBP10.45□□□□□ -0.74
SMC4-217ENST00000485867 AAASQ9NRG9 546 aa10.45□□□□□ -0.74
SMC4-217ENST00000485867 PCDHGC3Q9UN70 934 aa10.45□□□□□ -0.74
SMC4-217ENST00000485867 UNC13BO14795 1591 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 ATRNO75882 1429 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 WNT7AO00755 349 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 JUNDP17535 347 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 CYP4X1Q8N118 509 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
SMC4-217ENST00000485867 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 AVPP01185 164 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 FDX1P10109 184 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 RETREG3Q86VR2 466 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 CRIPAKQ8N1N5 446 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
SMC4-217ENST00000485867 TRPC5Q9UL62 973 aaPredicted RBP10.43□□□□□ -0.74
SMC4-217ENST00000485867 NALCNQ8IZF0 1738 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 PTPN23Q9H3S7 1636 aa10.43□□□□□ -0.74
SMC4-217ENST00000485867 DAPK1P53355 1430 aa10.42□□□□□ -0.74
SMC4-217ENST00000485867 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
SMC4-217ENST00000485867 POTECB2RU33 542 aa10.42□□□□□ -0.74
SMC4-217ENST00000485867 GIGYF2Q6Y7W6 1299 aaKnown RBP10.42□□□□□ -0.74
SMC4-217ENST00000485867 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMC4-217ENST00000485867 USP21Q9UK80 565 aa10.42□□□□□ -0.74
SMC4-217ENST00000485867 AMOTL2Q9Y2J4 779 aa10.42□□□□□ -0.74
SMC4-217ENST00000485867 NRXN3Q9Y4C0 1643 aa10.42□□□□□ -0.74
SMC4-217ENST00000485867 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
SMC4-217ENST00000485867 COL22A1Q8NFW1 1626 aaPredicted RBP10.41□□□□□ -0.74
SMC4-217ENST00000485867 CCDC24Q8N4L8 307 aa10.41□□□□□ -0.74
SMC4-217ENST00000485867 BRWD3Q6RI45 1802 aa10.4□□□□□ -0.74
SMC4-217ENST00000485867 FNBP4Q8N3X1 1017 aaPredicted RBP10.4□□□□□ -0.74
SMC4-217ENST00000485867 ADGRL3Q9HAR2 1447 aa10.4□□□□□ -0.75
SMC4-217ENST00000485867 ANKRD30AQ9BXX3 1397 aa10.39□□□□□ -0.75
SMC4-217ENST00000485867 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.39□□□□□ -0.75
SMC4-217ENST00000485867 MOXD2PA6NHM9 499 aa10.39□□□□□ -0.75
SMC4-217ENST00000485867 MRGPRX2Q96LB1 330 aa10.39□□□□□ -0.75
SMC4-217ENST00000485867 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
SMC4-217ENST00000485867 NDUFV2P19404 249 aa10.38□□□□□ -0.75
SMC4-217ENST00000485867 SKOR1P84550 965 aa10.38□□□□□ -0.75
SMC4-217ENST00000485867 KANK4Q5T7N3 995 aaPredicted RBP10.38□□□□□ -0.75
SMC4-217ENST00000485867 PARP9Q8IXQ6 854 aa10.38□□□□□ -0.75
SMC4-217ENST00000485867 ZNF775Q96BV0 537 aaPredicted RBP10.38□□□□□ -0.75
SMC4-217ENST00000485867 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
SMC4-217ENST00000485867 E9PCH4 1651 aa10.38□□□□□ -0.75
SMC4-217ENST00000485867 BCL9LQ86UU0 1499 aa10.37□□□□□ -0.75
SMC4-217ENST00000485867 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
SMC4-217ENST00000485867 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
SMC4-217ENST00000485867 TRIM66O15016 1216 aa10.37□□□□□ -0.75
SMC4-217ENST00000485867 SMPD1P17405 629 aa10.37□□□□□ -0.75
SMC4-217ENST00000485867 SNIP1Q8TAD8 396 aaKnown RBP10.37□□□□□ -0.75
SMC4-217ENST00000485867 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
SMC4-217ENST00000485867 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
SMC4-217ENST00000485867 MYOM2P54296 1465 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 C1orf167Q5SNV9 1468 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 GLI3P10071 1580 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 VPS8Q8N3P4 1428 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
SMC4-217ENST00000485867 WNT7BP56706 349 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms