RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 NINLQ9Y2I6 1382 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 ARID3CA6NKF2 412 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 GDF9O60383 454 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 CCNYL3P0C7X3 344 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 GJA5P36382 358 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 RSPH6AQ9H0K4 717 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 STK17AQ9UEE5 414 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 CDC42BPBQ9Y5S2 1711 aa6.1□□□□□ -1.43
SMARCC1-206ENST00000485737 ASXL1Q8IXJ9 1541 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 SCAPERQ9BY12 1400 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 LCE2BO14633 110 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 CLK2P49760 499 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 INSM1Q01101 510 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 NFKBIBQ15653 356 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 C8orf34Q49A92 452 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 TPRNQ4KMQ1 711 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 CYP4X1Q8N118 509 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 DCAF11Q8TEB1 546 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 FAM117AQ9C073 453 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 PKD2L1Q9P0L9 805 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 MYOM1P52179 1685 aa6.09□□□□□ -1.43
SMARCC1-206ENST00000485737 SYCP2Q9BX26 1530 aa6.09□□□□□ -1.44
SMARCC1-206ENST00000485737 SPHKAPQ2M3C7 1700 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 PLEKHH1Q9ULM0 1364 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 TTC24A2A3L6 582 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 FAM181BA6NEQ2 426 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 CFAP99D6REC4 459 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 CTHP32929 405 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 NEUROD2Q15784 382 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 QPCTQ16769 361 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 PTPRNQ16849 979 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 DUSP27Q5VZP5 1158 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 PTCRAQ6ISU1 281 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 TTC37Q6PGP7 1564 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 TRPM2O94759 1503 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 NLRP1Q9C000 1473 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 KIAA1210Q9ULL0 1709 aa6.08□□□□□ -1.44
SMARCC1-206ENST00000485737 TSPY4P0CV99 314 aa6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 TSPY10P0CW01 314 aa6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 TMF1P82094 1093 aa6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 CTC1Q2NKJ3 1217 aa6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 PRPF38BQ5VTL8 546 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 TRMT2AQ8IZ69 625 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 CRIPAKQ8N1N5 446 aa6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 NGEFQ8N5V2 710 aa6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 NKTRP30414 1462 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-206ENST00000485737 PLEKHD1A6NEE1 506 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 WNT7AO00755 349 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 LINC01559Q495D7 138 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 C20orf194Q5TEA3 1177 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 DESI1Q6ICB0 168 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 TREML4Q6UXN2 200 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 FAM43AQ8N2R8 423 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 UNC93B1Q9H1C4 597 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 BRPF3Q9ULD4 1205 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 ZNF777Q9ULD5 760 aaPredicted RBP6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 ERCC6Q03468 1493 aa6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 SCAF11Q99590 1463 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-206ENST00000485737 CEP152O94986 1710 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 PLIN1O60240 522 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 PPP2R1AP30153 589 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 SKOR1P84550 965 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 KCNH2Q12809 1159 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 CNGB1Q14028 1251 aaPredicted RBP6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 NBPF1Q3BBV0 1214 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 RC3H1Q5TC82 1133 aaKnown RBP6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 HELBQ8NG08 1087 aaPredicted RBP6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 FRAT1Q92837 279 aaPredicted RBP6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 MRGPRX2Q96LB1 330 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 PANK3Q9H999 370 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 EVA1BQ9NVM1 165 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 DEPDC5O75140 1603 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 SHROOM2Q13796 1616 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 MYO3AQ8NEV4 1616 aa6.05□□□□□ -1.44
SMARCC1-206ENST00000485737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 KDM5AP29375 1690 aaKnown RBP6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 MAPK8IP3Q9UPT6 1336 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 MYOM2P54296 1465 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 LILRB3O75022 631 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 WNT7BP56706 349 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 AAMPQ13685 434 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 CDCA8Q53HL2 280 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 LYPD8Q6UX82 237 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 EHBP1Q8NDI1 1231 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 UBE2Q2Q8WVN8 375 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 MAP10Q9P2G4 905 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 PTPRTO14522 1441 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 ABCC1P33527 1531 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 ARHGAP5Q13017 1502 aa6.04□□□□□ -1.44
SMARCC1-206ENST00000485737 IQSEC2Q5JU85 1478 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 USP19O94966 1318 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 CGNL1Q0VF96 1302 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 VWDEQ8N2E2 1590 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 PLEKHG3A1L390 1219 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 WDR43Q15061 677 aaKnown RBP eCLIP6.03□□□□□ -1.442e-6■□□□□ 11.2
SMARCC1-206ENST00000485737 SKIV2LQ15477 1246 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 TUSC1Q2TAM9 212 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms