RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 ZBTB40Q9NUA8 1239 aa10.02□□□□□ -0.81
SRRM1-214ENST00000485541 KDM4FA0A1W2PPD8 638 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 POTEIP0CG38 1075 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 MCM10Q7L590 875 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 TSPYL6Q8N831 410 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 C8orf58Q8NAV2 365 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 TSPYL4Q9UJ04 414 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 PCDHB15Q9Y5E8 787 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 ERBB3P21860 1342 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 SPATA31A3Q5VYP0 1347 aa10.01□□□□□ -0.81
SRRM1-214ENST00000485541 RGS12O14924 1447 aa10□□□□□ -0.81
SRRM1-214ENST00000485541 IGHDP01880 384 aa10□□□□□ -0.81
SRRM1-214ENST00000485541 DCTN1Q14203 1278 aa10□□□□□ -0.81
SRRM1-214ENST00000485541 TAF7Q15545 349 aaPredicted RBP10□□□□□ -0.81
SRRM1-214ENST00000485541 INTS3Q68E01 1043 aaKnown RBP10□□□□□ -0.81
SRRM1-214ENST00000485541 SMC5Q8IY18 1101 aa10□□□□□ -0.81
SRRM1-214ENST00000485541 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
SRRM1-214ENST00000485541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10□□□□□ -0.818e-8■■■□□ 14.7
SRRM1-214ENST00000485541 MRC1P22897 1456 aa9.99□□□□□ -0.81
SRRM1-214ENST00000485541 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
SRRM1-214ENST00000485541 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
SRRM1-214ENST00000485541 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
SRRM1-214ENST00000485541 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
SRRM1-214ENST00000485541 TNNQ9UQP3 1299 aa9.99□□□□□ -0.81
SRRM1-214ENST00000485541 COL22A1Q8NFW1 1626 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-214ENST00000485541 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-214ENST00000485541 CCDC30Q5VVM6 783 aa9.98□□□□□ -0.81
SRRM1-214ENST00000485541 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
SRRM1-214ENST00000485541 STK31Q9BXU1 1019 aa9.98□□□□□ -0.81
SRRM1-214ENST00000485541 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-214ENST00000485541 HSPA2P54652 639 aa9.97□□□□□ -0.81
SRRM1-214ENST00000485541 C1orf141Q5JVX7 400 aa9.97□□□□□ -0.81
SRRM1-214ENST00000485541 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
SRRM1-214ENST00000485541 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.82
SRRM1-214ENST00000485541 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
SRRM1-214ENST00000485541 CCT4P50991 539 aaKnown RBP9.96□□□□□ -0.82
SRRM1-214ENST00000485541 IL17REQ8NFR9 667 aa9.96□□□□□ -0.82
SRRM1-214ENST00000485541 LTV1Q96GA3 475 aaPredicted RBP9.96□□□□□ -0.82
SRRM1-214ENST00000485541 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
SRRM1-214ENST00000485541 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.82
SRRM1-214ENST00000485541 PLCH1Q4KWH8 1693 aa9.96□□□□□ -0.82
SRRM1-214ENST00000485541 WNK3Q9BYP7 1800 aa9.96□□□□□ -0.82
SRRM1-214ENST00000485541 C8orf34Q49A92 452 aa9.95□□□□□ -0.82
SRRM1-214ENST00000485541 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
SRRM1-214ENST00000485541 ZNF530Q6P9A1 599 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-214ENST00000485541 BRINP3Q76B58 766 aa9.95□□□□□ -0.82
SRRM1-214ENST00000485541 RPAP2Q8IXW5 612 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-214ENST00000485541 IPO9Q96P70 1041 aaKnown RBP9.95□□□□□ -0.82
SRRM1-214ENST00000485541 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
SRRM1-214ENST00000485541 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
SRRM1-214ENST00000485541 COL14A1Q05707 1796 aaKnown RBP9.95□□□□□ -0.82
SRRM1-214ENST00000485541 UBR2Q8IWV8 1755 aa9.95□□□□□ -0.82
SRRM1-214ENST00000485541 PAPPAQ13219 1627 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 HEG1Q9ULI3 1381 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 ELL2O00472 640 aaPredicted RBP9.94□□□□□ -0.82
SRRM1-214ENST00000485541 HSP90AB1P08238 724 aaKnown RBP9.94□□□□□ -0.82
SRRM1-214ENST00000485541 RGS3P49796 1198 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
SRRM1-214ENST00000485541 TEFQ10587 303 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 RAPGEF4Q8WZA2 1011 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 SPG7Q9UQ90 795 aa9.94□□□□□ -0.82
SRRM1-214ENST00000485541 TUBGCP6Q96RT7 1819 aa9.93□□□□□ -0.82
SRRM1-214ENST00000485541 ATP10DQ9P241 1426 aa9.93□□□□□ -0.82
SRRM1-214ENST00000485541 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
SRRM1-214ENST00000485541 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
SRRM1-214ENST00000485541 NUCB1Q02818 461 aa9.93□□□□□ -0.82
SRRM1-214ENST00000485541 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
SRRM1-214ENST00000485541 C5P01031 1676 aa9.93□□□□□ -0.82
SRRM1-214ENST00000485541 AK9Q5TCS8 1911 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 ZNF335Q9H4Z2 1342 aaPredicted RBP9.92□□□□□ -0.82
SRRM1-214ENST00000485541 HMMRO75330 724 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 EIF4A1P60842 406 aaKnown RBP9.92□□□□□ -0.82
SRRM1-214ENST00000485541 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 ANKRD44Q8N8A2 993 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 LRRC59Q96AG4 307 aaKnown RBP9.92□□□□□ -0.82
SRRM1-214ENST00000485541 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 ROBO1Q9Y6N7 1651 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 MEGF6O75095 1541 aa9.92□□□□□ -0.82
SRRM1-214ENST00000485541 COL5A2P05997 1499 aaPredicted RBP9.91□□□□□ -0.82
SRRM1-214ENST00000485541 GNAI3P08754 354 aa9.91□□□□□ -0.82
SRRM1-214ENST00000485541 FLIIQ13045 1269 aa9.91□□□□□ -0.82
SRRM1-214ENST00000485541 PROM2Q8N271 834 aa9.91□□□□□ -0.82
SRRM1-214ENST00000485541 WDR17Q8IZU2 1322 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 ZBTB7CA1YPR0 619 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 BTBD11A6QL63 1104 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 ZC3H6P61129 1189 aaKnown RBP9.9□□□□□ -0.82
SRRM1-214ENST00000485541 KRT24Q2M2I5 525 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 HDGFL1Q5TGJ6 251 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 CHD1LQ86WJ1 897 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 IFNL2Q8IZJ0 200 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 DCTPP1Q9H773 170 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 UPF2Q9HAU5 1272 aaKnown RBP9.9□□□□□ -0.82
SRRM1-214ENST00000485541 HDAC5Q9UQL6 1122 aa9.9□□□□□ -0.82
SRRM1-214ENST00000485541 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
SRRM1-214ENST00000485541 LRP6O75581 1613 aa9.89□□□□□ -0.83
SRRM1-214ENST00000485541 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
SRRM1-214ENST00000485541 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
SRRM1-214ENST00000485541 NOP58Q9Y2X3 529 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms