RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 FOXD4L4Q8WXT5 416 aaPredicted RBP18.34■□□□□ 0.53
TTC3-219ENST00000485402 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
TTC3-219ENST00000485402 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
TTC3-219ENST00000485402 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
TTC3-219ENST00000485402 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
TTC3-219ENST00000485402 MBIPQ9NS73 344 aa18.33■□□□□ 0.53
TTC3-219ENST00000485402 KDRP35968 1356 aa18.33■□□□□ 0.52
TTC3-219ENST00000485402 MCTP1Q6DN14 999 aa18.33■□□□□ 0.52
TTC3-219ENST00000485402 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
TTC3-219ENST00000485402 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
TTC3-219ENST00000485402 K7ELQ4 463 aaPredicted RBP18.32■□□□□ 0.52
TTC3-219ENST00000485402 RAB3GAP1Q15042 981 aa18.32■□□□□ 0.52
TTC3-219ENST00000485402 PXDNQ92626 1479 aa18.32■□□□□ 0.52
TTC3-219ENST00000485402 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
TTC3-219ENST00000485402 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
TTC3-219ENST00000485402 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
TTC3-219ENST00000485402 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
TTC3-219ENST00000485402 SKOR2Q2VWA4 1001 aaPredicted RBP18.31■□□□□ 0.52
TTC3-219ENST00000485402 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
TTC3-219ENST00000485402 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
TTC3-219ENST00000485402 RRP9O43818 475 aaKnown RBP18.31■□□□□ 0.52
TTC3-219ENST00000485402 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
TTC3-219ENST00000485402 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
TTC3-219ENST00000485402 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
TTC3-219ENST00000485402 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
TTC3-219ENST00000485402 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
TTC3-219ENST00000485402 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
TTC3-219ENST00000485402 SNX21Q969T3 373 aa18.3■□□□□ 0.52
TTC3-219ENST00000485402 SLIT3O75094 1523 aa18.3■□□□□ 0.52
TTC3-219ENST00000485402 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
TTC3-219ENST00000485402 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
TTC3-219ENST00000485402 TPRNQ4KMQ1 711 aa18.29■□□□□ 0.52
TTC3-219ENST00000485402 RGPD1P0DJD0 1748 aa18.29■□□□□ 0.52
TTC3-219ENST00000485402 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
TTC3-219ENST00000485402 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
TTC3-219ENST00000485402 VIRMAQ69YN4 1812 aaKnown RBP18.29■□□□□ 0.52
TTC3-219ENST00000485402 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
TTC3-219ENST00000485402 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
TTC3-219ENST00000485402 ERBB3P21860 1342 aa18.28■□□□□ 0.52
TTC3-219ENST00000485402 KIF2CQ99661 725 aa18.28■□□□□ 0.52
TTC3-219ENST00000485402 KRT24Q2M2I5 525 aa18.28■□□□□ 0.52
TTC3-219ENST00000485402 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
TTC3-219ENST00000485402 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
TTC3-219ENST00000485402 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
TTC3-219ENST00000485402 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
TTC3-219ENST00000485402 ZNF853P0CG23 659 aa18.27■□□□□ 0.51
TTC3-219ENST00000485402 CHAMP1Q96JM3 812 aa18.27■□□□□ 0.51
TTC3-219ENST00000485402 BAG4O95429 457 aaKnown RBP18.26■□□□□ 0.51
TTC3-219ENST00000485402 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
TTC3-219ENST00000485402 DDIT3P35638 169 aa18.25■□□□□ 0.51
TTC3-219ENST00000485402 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
TTC3-219ENST00000485402 C16orf71Q8IYS4 520 aaPredicted RBP18.25■□□□□ 0.51
TTC3-219ENST00000485402 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
TTC3-219ENST00000485402 ISY1Q9ULR0 285 aaKnown RBP18.25■□□□□ 0.51
TTC3-219ENST00000485402 PKP1Q13835 747 aa18.24■□□□□ 0.51
TTC3-219ENST00000485402 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
TTC3-219ENST00000485402 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
TTC3-219ENST00000485402 STRN4Q9NRL3 753 aa18.24■□□□□ 0.51
TTC3-219ENST00000485402 IL17REQ8NFR9 667 aa18.24■□□□□ 0.51
TTC3-219ENST00000485402 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
TTC3-219ENST00000485402 ZBTB7BO15156 539 aaPredicted RBP18.24■□□□□ 0.51
TTC3-219ENST00000485402 FOXD4L6Q3SYB3 417 aaPredicted RBP18.24■□□□□ 0.51
TTC3-219ENST00000485402 FOXD4L3Q6VB84 417 aaPredicted RBP18.24■□□□□ 0.51
TTC3-219ENST00000485402 FAM13BQ9NYF5 915 aa18.24■□□□□ 0.51
TTC3-219ENST00000485402 RGPD2P0DJD1 1756 aa18.23■□□□□ 0.51
TTC3-219ENST00000485402 VAMP4O75379 141 aa18.23■□□□□ 0.51
TTC3-219ENST00000485402 PRPF40AO75400 957 aaKnown RBP18.23■□□□□ 0.51
TTC3-219ENST00000485402 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
TTC3-219ENST00000485402 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
TTC3-219ENST00000485402 CHL1O00533 1208 aa18.23■□□□□ 0.51
TTC3-219ENST00000485402 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
TTC3-219ENST00000485402 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
TTC3-219ENST00000485402 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
TTC3-219ENST00000485402 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
TTC3-219ENST00000485402 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
TTC3-219ENST00000485402 CDC45O75419 566 aa18.22■□□□□ 0.51
TTC3-219ENST00000485402 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
TTC3-219ENST00000485402 NOL8Q76FK4 1167 aaKnown RBP18.22■□□□□ 0.51
TTC3-219ENST00000485402 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
TTC3-219ENST00000485402 ZSCAN30Q86W11 494 aa18.21■□□□□ 0.51
TTC3-219ENST00000485402 EVA1CP58658 441 aa18.21■□□□□ 0.51
TTC3-219ENST00000485402 SIRT2Q8IXJ6 389 aa18.21■□□□□ 0.5
TTC3-219ENST00000485402 RNF214Q8ND24 703 aa18.21■□□□□ 0.5
TTC3-219ENST00000485402 MPNDQ8N594 471 aa18.2■□□□□ 0.5
TTC3-219ENST00000485402 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
TTC3-219ENST00000485402 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
TTC3-219ENST00000485402 SMARCA5O60264 1052 aaPredicted RBP18.19■□□□□ 0.5
TTC3-219ENST00000485402 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
TTC3-219ENST00000485402 KLHL40Q2TBA0 621 aa18.19■□□□□ 0.5
TTC3-219ENST00000485402 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
TTC3-219ENST00000485402 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
TTC3-219ENST00000485402 PTMSP20962 102 aa18.18■□□□□ 0.5
TTC3-219ENST00000485402 TEFQ10587 303 aa18.18■□□□□ 0.5
TTC3-219ENST00000485402 CRB1P82279 1406 aa18.18■□□□□ 0.5
TTC3-219ENST00000485402 TOM1O60784 492 aa18.18■□□□□ 0.5
TTC3-219ENST00000485402 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
TTC3-219ENST00000485402 LTBP4Q8N2S1 1624 aa18.18■□□□□ 0.5
TTC3-219ENST00000485402 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
TTC3-219ENST00000485402 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
TTC3-219ENST00000485402 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms