RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 BTBD11A6QL63 1104 aa21.16■□□□□ 0.98
CTSA-207ENST00000484855 ZBTB7BO15156 539 aaPredicted RBP21.16■□□□□ 0.98
CTSA-207ENST00000484855 EIF4A1P60842 406 aaKnown RBP21.14■□□□□ 0.98
CTSA-207ENST00000484855 HDAC1Q13547 482 aaPredicted RBP21.14■□□□□ 0.98
CTSA-207ENST00000484855 COL22A1Q8NFW1 1626 aaPredicted RBP21.14■□□□□ 0.98
CTSA-207ENST00000484855 RGS3P49796 1198 aa21.14■□□□□ 0.97
CTSA-207ENST00000484855 TOM1L2Q6ZVM7 507 aa21.14■□□□□ 0.97
CTSA-207ENST00000484855 PHKG2P15735 406 aa21.13■□□□□ 0.97
CTSA-207ENST00000484855 INTS3Q68E01 1043 aaKnown RBP21.13■□□□□ 0.97
CTSA-207ENST00000484855 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
CTSA-207ENST00000484855 G2E3Q7L622 706 aa21.13■□□□□ 0.97
CTSA-207ENST00000484855 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
CTSA-207ENST00000484855 N4BP2Q86UW6 1770 aaPredicted RBP21.12■□□□□ 0.97
CTSA-207ENST00000484855 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
CTSA-207ENST00000484855 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
CTSA-207ENST00000484855 KCNQ3O43525 872 aa21.12■□□□□ 0.97
CTSA-207ENST00000484855 HOXB7P09629 217 aa21.12■□□□□ 0.97
CTSA-207ENST00000484855 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
CTSA-207ENST00000484855 COL14A1Q05707 1796 aaKnown RBP21.1■□□□□ 0.97
CTSA-207ENST00000484855 PDE4AP27815 886 aa21.1■□□□□ 0.97
CTSA-207ENST00000484855 FLIIQ13045 1269 aa21.09■□□□□ 0.97
CTSA-207ENST00000484855 C1orf115Q9H7X2 142 aa21.09■□□□□ 0.97
CTSA-207ENST00000484855 STRN4Q9NRL3 753 aa21.09■□□□□ 0.97
CTSA-207ENST00000484855 MRC1P22897 1456 aa21.09■□□□□ 0.97
CTSA-207ENST00000484855 CHMP4AQ9BY43 222 aa21.09■□□□□ 0.97
CTSA-207ENST00000484855 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
CTSA-207ENST00000484855 CYP27B1O15528 508 aa21.08■□□□□ 0.97
CTSA-207ENST00000484855 EVA1CP58658 441 aa21.08■□□□□ 0.97
CTSA-207ENST00000484855 CARD10Q9BWT7 1032 aa21.08■□□□□ 0.97
CTSA-207ENST00000484855 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
CTSA-207ENST00000484855 BACH2Q9BYV9 841 aa21.07■□□□□ 0.96
CTSA-207ENST00000484855 SLC52A2Q9HAB3 445 aa21.07■□□□□ 0.96
CTSA-207ENST00000484855 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
CTSA-207ENST00000484855 HSP90AB1P08238 724 aaKnown RBP21.07■□□□□ 0.96
CTSA-207ENST00000484855 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
CTSA-207ENST00000484855 FKBP5Q13451 457 aaPredicted RBP21.07■□□□□ 0.96
CTSA-207ENST00000484855 DCAF5Q96JK2 942 aa21.07■□□□□ 0.96
CTSA-207ENST00000484855 LARP1Q6PKG0 1096 aaKnown RBP21.06■□□□□ 0.96
CTSA-207ENST00000484855 F6X3S4 739 aa21.06■□□□□ 0.96
CTSA-207ENST00000484855 SLC4A10Q6U841 1118 aa21.06■□□□□ 0.96
CTSA-207ENST00000484855 CCT4P50991 539 aaKnown RBP21.05■□□□□ 0.96
CTSA-207ENST00000484855 C5P01031 1676 aa21.05■□□□□ 0.96
CTSA-207ENST00000484855 HEG1Q9ULI3 1381 aa21.05■□□□□ 0.96
CTSA-207ENST00000484855 PCDH11XQ9BZA7 1347 aa21.05■□□□□ 0.96
CTSA-207ENST00000484855 PCDH11YQ9BZA8 1340 aa21.05■□□□□ 0.96
CTSA-207ENST00000484855 SMC5Q8IY18 1101 aa21.04■□□□□ 0.96
CTSA-207ENST00000484855 PXDNLA1KZ92 1463 aa21.04■□□□□ 0.96
CTSA-207ENST00000484855 IL2RBP14784 551 aa21.04■□□□□ 0.96
CTSA-207ENST00000484855 ZCRB1Q8TBF4 217 aaKnown RBP21.03■□□□□ 0.96
CTSA-207ENST00000484855 BTG4Q9NY30 223 aa21.03■□□□□ 0.96
CTSA-207ENST00000484855 CHPF2Q9P2E5 772 aa21.03■□□□□ 0.96
CTSA-207ENST00000484855 GIGYF1O75420 1035 aaPredicted RBP21.02■□□□□ 0.96
CTSA-207ENST00000484855 NFATC2IPQ8NCF5 419 aa21.02■□□□□ 0.96
CTSA-207ENST00000484855 ZNF790Q6PG37 636 aa21.02■□□□□ 0.95
CTSA-207ENST00000484855 FAM161AQ3B820 660 aa21.01■□□□□ 0.95
CTSA-207ENST00000484855 PHAXQ9H814 394 aaKnown RBP21.01■□□□□ 0.95
CTSA-207ENST00000484855 PLCH1Q4KWH8 1693 aa21.01■□□□□ 0.95
CTSA-207ENST00000484855 MEIS3Q99687 375 aa21■□□□□ 0.95
CTSA-207ENST00000484855 ATP10DQ9P241 1426 aa21■□□□□ 0.95
CTSA-207ENST00000484855 SLC39A6Q13433 755 aa21■□□□□ 0.95
CTSA-207ENST00000484855 SIRT2Q8IXJ6 389 aa21■□□□□ 0.95
CTSA-207ENST00000484855 TOM1O60784 492 aa20.99■□□□□ 0.95
CTSA-207ENST00000484855 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
CTSA-207ENST00000484855 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
CTSA-207ENST00000484855 WNK3Q9BYP7 1800 aa20.98■□□□□ 0.95
CTSA-207ENST00000484855 CABP4P57796 275 aa20.98■□□□□ 0.95
CTSA-207ENST00000484855 C8orf34Q49A92 452 aa20.97■□□□□ 0.95
CTSA-207ENST00000484855 USP35Q9P2H5 1018 aa20.97■□□□□ 0.95
CTSA-207ENST00000484855 PRAMEF22A3QJZ6 481 aa20.97■□□□□ 0.95
CTSA-207ENST00000484855 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
CTSA-207ENST00000484855 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
CTSA-207ENST00000484855 ANXA1P04083 346 aa20.96■□□□□ 0.95
CTSA-207ENST00000484855 PIP4K2BP78356 416 aa20.96■□□□□ 0.95
CTSA-207ENST00000484855 NUCB1Q02818 461 aa20.96■□□□□ 0.95
CTSA-207ENST00000484855 RPAP2Q8IXW5 612 aaPredicted RBP20.96■□□□□ 0.95
CTSA-207ENST00000484855 ANKRD44Q8N8A2 993 aa20.96■□□□□ 0.95
CTSA-207ENST00000484855 CEP85Q6P2H3 762 aa20.95■□□□□ 0.94
CTSA-207ENST00000484855 PAPPAQ13219 1627 aa20.95■□□□□ 0.94
CTSA-207ENST00000484855 TOGARAM1Q9Y4F4 1720 aa20.95■□□□□ 0.94
CTSA-207ENST00000484855 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
CTSA-207ENST00000484855 NRAPQ86VF7 1730 aa20.94■□□□□ 0.94
CTSA-207ENST00000484855 NKX1-1Q15270 411 aaPredicted RBP20.94■□□□□ 0.94
CTSA-207ENST00000484855 DDX54Q8TDD1 881 aaKnown RBP20.94■□□□□ 0.94
CTSA-207ENST00000484855 GLI3P10071 1580 aa20.94■□□□□ 0.94
CTSA-207ENST00000484855 ZNF496Q96IT1 587 aaPredicted RBP20.93■□□□□ 0.94
CTSA-207ENST00000484855 GNAI3P08754 354 aa20.93■□□□□ 0.94
CTSA-207ENST00000484855 CHD1LQ86WJ1 897 aa20.93■□□□□ 0.94
CTSA-207ENST00000484855 ERVV-2B6SEH9 535 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 ANP32AP39687 249 aaKnown RBP20.92■□□□□ 0.94
CTSA-207ENST00000484855 PROSER3Q2NL68 480 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 FMNL2Q96PY5 1086 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 DISP2A7MBM2 1401 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 GNAI2P04899 355 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 ANKRD45Q5TZF3 282 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 DNAAF4Q8WXU2 420 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
CTSA-207ENST00000484855 ADCY9O60503 1353 aa20.91■□□□□ 0.94
CTSA-207ENST00000484855 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
CTSA-207ENST00000484855 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms