RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 RIMS2Q9UQ26 1411 aa14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 CAPN2P17655 700 aa14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 FKBP5Q13451 457 aaPredicted RBP14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 TTC22Q5TAA0 569 aa14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 TIGD1Q96MW7 591 aa14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 EDC4Q6P2E9 1401 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 RIOK3O14730 519 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 ATP10DQ9P241 1426 aa14.03□□□□□ -0.16
SEC61A1-205ENST00000483956 SETD1AO15047 1707 aaKnown RBP14.02□□□□□ -0.17
SEC61A1-205ENST00000483956 HMOX1P09601 288 aa14.02□□□□□ -0.17
SEC61A1-205ENST00000483956 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 TRIM6-TRIM34B2RNG4 842 aa14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 ZBTB9Q96C00 473 aa14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 USP26Q9BXU7 913 aa14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 TRIM34Q9BYJ4 488 aa14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
SEC61A1-205ENST00000483956 RAPGEF3O95398 923 aa14□□□□□ -0.17
SEC61A1-205ENST00000483956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
SEC61A1-205ENST00000483956 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
SEC61A1-205ENST00000483956 SPTLC3Q9NUV7 552 aa14□□□□□ -0.17
SEC61A1-205ENST00000483956 RGS12O14924 1447 aa14□□□□□ -0.17
SEC61A1-205ENST00000483956 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
SEC61A1-205ENST00000483956 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
SEC61A1-205ENST00000483956 MON2Q7Z3U7 1717 aa13.99□□□□□ -0.17
SEC61A1-205ENST00000483956 EMILIN1Q9Y6C2 1016 aa13.99□□□□□ -0.17
SEC61A1-205ENST00000483956 ERICH4A6NGS2 130 aa13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 TULP2O00295 520 aa13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 FBLN1P23142 703 aa13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 TERF2Q15554 542 aa13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 CTNNA3Q9UI47 895 aa13.98□□□□□ -0.17
SEC61A1-205ENST00000483956 CTIFO43310 598 aaKnown RBP13.97□□□□□ -0.17
SEC61A1-205ENST00000483956 TSPY26PQ9H489 355 aa13.97□□□□□ -0.17
SEC61A1-205ENST00000483956 NCBP1Q09161 790 aaKnown RBP13.97□□□□□ -0.17
SEC61A1-205ENST00000483956 CASC1Q6TDU7 716 aa13.97□□□□□ -0.17
SEC61A1-205ENST00000483956 DIAPH3Q9NSV4 1193 aa13.97□□□□□ -0.17
SEC61A1-205ENST00000483956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.96□□□□□ -0.17
SEC61A1-205ENST00000483956 ST18O60284 1047 aa13.96□□□□□ -0.17
SEC61A1-205ENST00000483956 USP25Q9UHP3 1055 aa13.96□□□□□ -0.17
SEC61A1-205ENST00000483956 C3P01024 1663 aa13.96□□□□□ -0.18
SEC61A1-205ENST00000483956 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.18
SEC61A1-205ENST00000483956 CEP85Q6P2H3 762 aa13.96□□□□□ -0.18
SEC61A1-205ENST00000483956 CHMP4CQ96CF2 233 aa13.96□□□□□ -0.18
SEC61A1-205ENST00000483956 KIAA0232Q92628 1395 aa13.95□□□□□ -0.18
SEC61A1-205ENST00000483956 SDSP20132 328 aa13.95□□□□□ -0.18
SEC61A1-205ENST00000483956 DDX41Q9UJV9 622 aaKnown RBP13.95□□□□□ -0.18
SEC61A1-205ENST00000483956 AKAP12Q02952 1782 aa13.95□□□□□ -0.18
SEC61A1-205ENST00000483956 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
SEC61A1-205ENST00000483956 KIF13AQ9H1H9 1805 aa13.95□□□□□ -0.18
SEC61A1-205ENST00000483956 REC8O95072 547 aa13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 ZDHHC9Q9Y397 364 aa13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 PTPRCP08575 1304 aa13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 FOXD4L5Q5VV16 416 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 FOXD4L4Q8WXT5 416 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 SENP3Q9H4L4 574 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-205ENST00000483956 NME9Q86XW9 330 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 CALCOCO1Q9P1Z2 691 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 CPS1P31327 1500 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 MSH6P52701 1360 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 FAM83GA6ND36 823 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 ADCY5O95622 1261 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 OTUD7AQ8TE49 926 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 ITSN1Q15811 1721 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
SEC61A1-205ENST00000483956 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 OSBPL3Q9H4L5 887 aa13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 MORC2Q9Y6X9 1032 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 WASLO00401 505 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 COG3Q96JB2 828 aa13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 PYCARDQ9ULZ3 195 aa13.92□□□□□ -0.18
SEC61A1-205ENST00000483956 CHL1O00533 1208 aa13.91□□□□□ -0.18
SEC61A1-205ENST00000483956 NAA30Q147X3 362 aaPredicted RBP13.91□□□□□ -0.18
SEC61A1-205ENST00000483956 NRXN3Q9Y4C0 1643 aa13.91□□□□□ -0.18
SEC61A1-205ENST00000483956 ERC2O15083 957 aa13.91□□□□□ -0.18
SEC61A1-205ENST00000483956 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 MBD3O95983 291 aa13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 BRD2P25440 801 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 FEZ2Q9UHY8 353 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 KIF18AQ8NI77 898 aa13.9□□□□□ -0.18
SEC61A1-205ENST00000483956 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
SEC61A1-205ENST00000483956 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
SEC61A1-205ENST00000483956 HMMRO75330 724 aa13.89□□□□□ -0.19
SEC61A1-205ENST00000483956 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
SEC61A1-205ENST00000483956 MCM2P49736 904 aa13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 KCNF1Q9H3M0 494 aa13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms