RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PHKG2P15735 406 aa33.35■■■□□ 2.93
SHOX2-204ENST00000483851 ITPRIPQ8IWB1 547 aa33.35■■■□□ 2.93
SHOX2-204ENST00000483851 HSP90AB1P08238 724 aaKnown RBP33.35■■■□□ 2.93
SHOX2-204ENST00000483851 CCDC30Q5VVM6 783 aa33.34■■■□□ 2.93
SHOX2-204ENST00000483851 BTBD11A6QL63 1104 aa33.33■■■□□ 2.93
SHOX2-204ENST00000483851 EVA1CP58658 441 aa33.32■■■□□ 2.92
SHOX2-204ENST00000483851 TCERG1O14776 1098 aaKnown RBP33.31■■■□□ 2.92
SHOX2-204ENST00000483851 EIF4A1P60842 406 aaKnown RBP33.31■■■□□ 2.92
SHOX2-204ENST00000483851 STK31Q9BXU1 1019 aa33.31■■■□□ 2.92
SHOX2-204ENST00000483851 DCAF5Q96JK2 942 aa33.3■■■□□ 2.92
SHOX2-204ENST00000483851 SLC4A2P04920 1241 aa33.29■■■□□ 2.92
SHOX2-204ENST00000483851 KDM6AO15550 1401 aaPredicted RBP33.28■■■□□ 2.92
SHOX2-204ENST00000483851 ZBTB40Q9NUA8 1239 aa33.28■■■□□ 2.92
SHOX2-204ENST00000483851 MRC1P22897 1456 aa33.28■■■□□ 2.92
SHOX2-204ENST00000483851 IL2RBP14784 551 aa33.27■■■□□ 2.92
SHOX2-204ENST00000483851 MSH5O43196 834 aa33.26■■■□□ 2.91
SHOX2-204ENST00000483851 PCDHB15Q9Y5E8 787 aa33.26■■■□□ 2.91
SHOX2-204ENST00000483851 PCDH11XQ9BZA7 1347 aa33.25■■■□□ 2.91
SHOX2-204ENST00000483851 PCDH11YQ9BZA8 1340 aa33.25■■■□□ 2.91
SHOX2-204ENST00000483851 CYP27B1O15528 508 aa33.25■■■□□ 2.91
SHOX2-204ENST00000483851 LARP1Q6PKG0 1096 aaKnown RBP33.25■■■□□ 2.91
SHOX2-204ENST00000483851 RWDD1Q9H446 243 aaPredicted RBP33.25■■■□□ 2.91
SHOX2-204ENST00000483851 RGS12O14924 1447 aa33.25■■■□□ 2.91
SHOX2-204ENST00000483851 INTS3Q68E01 1043 aaKnown RBP33.25■■■□□ 2.91
SHOX2-204ENST00000483851 SLC52A2Q9HAB3 445 aa33.25■■■□□ 2.91
SHOX2-204ENST00000483851 STRN4Q9NRL3 753 aa33.25■■■□□ 2.91
SHOX2-204ENST00000483851 HEG1Q9ULI3 1381 aa33.24■■■□□ 2.91
SHOX2-204ENST00000483851 ZCRB1Q8TBF4 217 aaKnown RBP33.24■■■□□ 2.91
SHOX2-204ENST00000483851 BTG4Q9NY30 223 aa33.23■■■□□ 2.91
SHOX2-204ENST00000483851 IGHDP01880 384 aa33.22■■■□□ 2.91
SHOX2-204ENST00000483851 ZBTB7BO15156 539 aaPredicted RBP33.22■■■□□ 2.91
SHOX2-204ENST00000483851 HDGFL1Q5TGJ6 251 aa33.2■■■□□ 2.9
SHOX2-204ENST00000483851 HDAC1Q13547 482 aaPredicted RBP33.19■■■□□ 2.9
SHOX2-204ENST00000483851 NKX1-1Q15270 411 aaPredicted RBP33.18■■■□□ 2.9
SHOX2-204ENST00000483851 UBAP1LF5GYI3 381 aa33.16■■■□□ 2.9
SHOX2-204ENST00000483851 KCNQ3O43525 872 aa33.16■■■□□ 2.9
SHOX2-204ENST00000483851 ANP32EQ9BTT0 268 aa33.16■■■□□ 2.9
SHOX2-204ENST00000483851 PIP4K2BP78356 416 aa33.16■■■□□ 2.9
SHOX2-204ENST00000483851 FLIIQ13045 1269 aa33.15■■■□□ 2.9
SHOX2-204ENST00000483851 PLCH1Q4KWH8 1693 aa33.15■■■□□ 2.9
SHOX2-204ENST00000483851 GIGYF1O75420 1035 aaPredicted RBP33.14■■■□□ 2.9
SHOX2-204ENST00000483851 ZNF790Q6PG37 636 aa33.14■■■□□ 2.9
SHOX2-204ENST00000483851 SHANK3Q9BYB0 1731 aa33.14■■■□□ 2.9
SHOX2-204ENST00000483851 CCT4P50991 539 aaKnown RBP33.13■■■□□ 2.89
SHOX2-204ENST00000483851 G2E3Q7L622 706 aa33.13■■■□□ 2.89
SHOX2-204ENST00000483851 NFATC2IPQ8NCF5 419 aa33.13■■■□□ 2.89
SHOX2-204ENST00000483851 ERVV-2B6SEH9 535 aa33.12■■■□□ 2.89
SHOX2-204ENST00000483851 PXDNLA1KZ92 1463 aa33.1■■■□□ 2.89
SHOX2-204ENST00000483851 DISP2A7MBM2 1401 aa33.1■■■□□ 2.89
SHOX2-204ENST00000483851 CABP4P57796 275 aa33.1■■■□□ 2.89
SHOX2-204ENST00000483851 N4BP2Q86UW6 1770 aaPredicted RBP33.09■■■□□ 2.89
SHOX2-204ENST00000483851 DBF4Q9UBU7 674 aaPredicted RBP33.08■■■□□ 2.89
SHOX2-204ENST00000483851 FKBP5Q13451 457 aaPredicted RBP33.08■■■□□ 2.89
SHOX2-204ENST00000483851 NRAPQ86VF7 1730 aa33.07■■■□□ 2.88
SHOX2-204ENST00000483851 NWD2Q9ULI1 1742 aa33.07■■■□□ 2.88
SHOX2-204ENST00000483851 EIF2S2P20042 333 aaKnown RBP33.06■■■□□ 2.88
SHOX2-204ENST00000483851 NECTIN2Q92692 538 aa33.06■■■□□ 2.88
SHOX2-204ENST00000483851 MYT1Q01538 1121 aa33.05■■■□□ 2.88
SHOX2-204ENST00000483851 TTC5Q8N0Z6 440 aa33.05■■■□□ 2.88
SHOX2-204ENST00000483851 CDCA7Q9BWT1 371 aaPredicted RBP33.05■■■□□ 2.88
SHOX2-204ENST00000483851 WNK3Q9BYP7 1800 aa33.04■■■□□ 2.88
SHOX2-204ENST00000483851 THRAP3Q9Y2W1 955 aaKnown RBP33.03■■■□□ 2.88
SHOX2-204ENST00000483851 SMC5Q8IY18 1101 aa33.03■■■□□ 2.88
SHOX2-204ENST00000483851 CHPF2Q9P2E5 772 aa33.03■■■□□ 2.88
SHOX2-204ENST00000483851 JCADQ9P266 1359 aa33.02■■■□□ 2.88
SHOX2-204ENST00000483851 FMNL2Q96PY5 1086 aa33.01■■■□□ 2.88
SHOX2-204ENST00000483851 ADAMTS2O95450 1211 aa33.01■■■□□ 2.87
SHOX2-204ENST00000483851 USP35Q9P2H5 1018 aa33.01■■■□□ 2.87
SHOX2-204ENST00000483851 SLC39A6Q13433 755 aa33■■■□□ 2.87
SHOX2-204ENST00000483851 CERKQ8TCT0 537 aa32.99■■■□□ 2.87
SHOX2-204ENST00000483851 DDX54Q8TDD1 881 aaKnown RBP32.99■■■□□ 2.87
SHOX2-204ENST00000483851 HYPKQ9NX55 129 aa32.99■■■□□ 2.87
SHOX2-204ENST00000483851 SLIT2O94813 1529 aa32.99■■■□□ 2.87
SHOX2-204ENST00000483851 F6X3S4 739 aa32.99■■■□□ 2.87
SHOX2-204ENST00000483851 SNRPA1P09661 255 aaKnown RBP32.99■■■□□ 2.87
SHOX2-204ENST00000483851 PDE4AP27815 886 aa32.98■■■□□ 2.87
SHOX2-204ENST00000483851 SLC4A10Q6U841 1118 aa32.98■■■□□ 2.87
SHOX2-204ENST00000483851 ZNF496Q96IT1 587 aaPredicted RBP32.98■■■□□ 2.87
SHOX2-204ENST00000483851 PHAXQ9H814 394 aaKnown RBP32.98■■■□□ 2.87
SHOX2-204ENST00000483851 PAPPAQ13219 1627 aa32.98■■■□□ 2.87
SHOX2-204ENST00000483851 BACH2Q9BYV9 841 aa32.97■■■□□ 2.87
SHOX2-204ENST00000483851 DDX21Q9NR30 783 aaKnown RBP eCLIP32.97■■■□□ 2.87
SHOX2-204ENST00000483851 C5P01031 1676 aa32.97■■■□□ 2.87
SHOX2-204ENST00000483851 RPAP2Q8IXW5 612 aaPredicted RBP32.97■■■□□ 2.87
SHOX2-204ENST00000483851 UBR2Q8IWV8 1755 aa32.97■■■□□ 2.87
SHOX2-204ENST00000483851 GCC1Q96CN9 775 aa32.96■■■□□ 2.87
SHOX2-204ENST00000483851 LRP6O75581 1613 aa32.96■■■□□ 2.87
SHOX2-204ENST00000483851 PDZRN3Q9UPQ7 1066 aa32.95■■■□□ 2.87
SHOX2-204ENST00000483851 SPATA31A1Q5TZJ5 1347 aa32.95■■■□□ 2.87
SHOX2-204ENST00000483851 NUTM2BA6NNL0 878 aaPredicted RBP32.94■■■□□ 2.86
SHOX2-204ENST00000483851 NUTM2EB1AL46 878 aaPredicted RBP32.94■■■□□ 2.86
SHOX2-204ENST00000483851 NUTM2AQ8IVF1 878 aaPredicted RBP32.94■■■□□ 2.86
SHOX2-204ENST00000483851 EXOC5O00471 708 aa32.93■■■□□ 2.86
SHOX2-204ENST00000483851 LAMB4A4D0S4 1761 aa32.93■■■□□ 2.86
SHOX2-204ENST00000483851 GNAI3P08754 354 aa32.93■■■□□ 2.86
SHOX2-204ENST00000483851 TNS2Q63HR2 1409 aa32.92■■■□□ 2.86
SHOX2-204ENST00000483851 TOGARAM1Q9Y4F4 1720 aa32.92■■■□□ 2.86
SHOX2-204ENST00000483851 MEIS3Q99687 375 aa32.92■■■□□ 2.86
SHOX2-204ENST00000483851 C1orf115Q9H7X2 142 aa32.92■■■□□ 2.86
SHOX2-204ENST00000483851 ATP10DQ9P241 1426 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms