RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 TFCP2L1Q9NZI6 479 aa10.42□□□□□ -0.74
SORT1-205ENST00000483508 FAM208AQ9UK61 1670 aaKnown RBP10.41□□□□□ -0.74
SORT1-205ENST00000483508 MAPK8IP3Q9UPT6 1336 aa10.41□□□□□ -0.74
SORT1-205ENST00000483508 CT47B1P0C2W7 299 aaPredicted RBP10.41□□□□□ -0.74
SORT1-205ENST00000483508 HOXC9P31274 260 aa10.41□□□□□ -0.74
SORT1-205ENST00000483508 DEKP35659 375 aaKnown RBP10.41□□□□□ -0.74
SORT1-205ENST00000483508 PRIM1P49642 420 aaKnown RBP10.41□□□□□ -0.74
SORT1-205ENST00000483508 GPR162Q16538 588 aa10.41□□□□□ -0.74
SORT1-205ENST00000483508 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
SORT1-205ENST00000483508 MYH16Q9H6N6 1097 aa10.41□□□□□ -0.74
SORT1-205ENST00000483508 COL3A1P02461 1466 aaPredicted RBP10.41□□□□□ -0.74
SORT1-205ENST00000483508 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
SORT1-205ENST00000483508 BCAR3O75815 825 aa10.4□□□□□ -0.74
SORT1-205ENST00000483508 CANXP27824 592 aaKnown RBP10.4□□□□□ -0.74
SORT1-205ENST00000483508 MTHFSP49914 203 aa10.4□□□□□ -0.74
SORT1-205ENST00000483508 ZNF827Q17R98 1081 aa10.4□□□□□ -0.74
SORT1-205ENST00000483508 SLC16A10Q8TF71 515 aa10.4□□□□□ -0.74
SORT1-205ENST00000483508 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
SORT1-205ENST00000483508 FBLN1P23142 703 aa10.39□□□□□ -0.75
SORT1-205ENST00000483508 NBR1Q14596 966 aa10.39□□□□□ -0.75
SORT1-205ENST00000483508 RAPGEF4Q8WZA2 1011 aa10.39□□□□□ -0.75
SORT1-205ENST00000483508 CLUAP1Q96AJ1 413 aa10.39□□□□□ -0.75
SORT1-205ENST00000483508 BCL11AQ9H165 835 aa10.39□□□□□ -0.75
SORT1-205ENST00000483508 TATP17735 454 aaPredicted RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 HMGB2P26583 209 aaKnown RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 RARSP54136 660 aaKnown RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 KCNQ4P56696 695 aa10.38□□□□□ -0.75
SORT1-205ENST00000483508 RRS1Q15050 365 aaKnown RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 C8orf34Q49A92 452 aa10.38□□□□□ -0.75
SORT1-205ENST00000483508 ZNF784Q8NCA9 323 aaPredicted RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 PNNQ9H307 717 aaKnown RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
SORT1-205ENST00000483508 CCNL1Q9UK58 526 aaPredicted RBP10.38□□□□□ -0.75
SORT1-205ENST00000483508 USHBP1Q8N6Y0 703 aa10.37□□□□□ -0.75
SORT1-205ENST00000483508 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
SORT1-205ENST00000483508 SGIP1Q9BQI5 828 aa10.37□□□□□ -0.75
SORT1-205ENST00000483508 IL16Q14005 1332 aa10.36□□□□□ -0.75
SORT1-205ENST00000483508 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
SORT1-205ENST00000483508 CHD4Q14839 1912 aa10.36□□□□□ -0.75
SORT1-205ENST00000483508 RGPD2P0DJD1 1756 aa10.36□□□□□ -0.75
SORT1-205ENST00000483508 RTL1A6NKG5 1358 aa10.36□□□□□ -0.75
SORT1-205ENST00000483508 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
SORT1-205ENST00000483508 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
SORT1-205ENST00000483508 PNPLA7Q6ZV29 1317 aa10.35□□□□□ -0.75
SORT1-205ENST00000483508 FYB1O15117 783 aa10.35□□□□□ -0.75
SORT1-205ENST00000483508 TNNT2P45379 298 aaPredicted RBP10.35□□□□□ -0.75
SORT1-205ENST00000483508 NBPF6Q5VWK0 638 aa10.35□□□□□ -0.75
SORT1-205ENST00000483508 NBPF4Q96M43 638 aa10.35□□□□□ -0.75
SORT1-205ENST00000483508 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
SORT1-205ENST00000483508 U2AF1L5P0DN76 240 aaPredicted RBP10.34□□□□□ -0.75
SORT1-205ENST00000483508 U2AF1Q01081 240 aaKnown RBP eCLIP10.34□□□□□ -0.75
SORT1-205ENST00000483508 MAP3K5Q99683 1374 aa10.34□□□□□ -0.75
SORT1-205ENST00000483508 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 IGHDP01880 384 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 RGS3P49796 1198 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 MPRIPQ6WCQ1 1025 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 SKAP1Q86WV1 359 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 MEGF6O75095 1541 aa10.33□□□□□ -0.76
SORT1-205ENST00000483508 NEFMP07197 916 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 HSP90AB2PQ58FF8 381 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 FRAT1Q92837 279 aaPredicted RBP10.32□□□□□ -0.76
SORT1-205ENST00000483508 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 RWDD1Q9H446 243 aaPredicted RBP10.32□□□□□ -0.76
SORT1-205ENST00000483508 RRP7AQ9Y3A4 280 aaKnown RBP10.32□□□□□ -0.76
SORT1-205ENST00000483508 LY75O60449 1722 aa10.32□□□□□ -0.76
SORT1-205ENST00000483508 FLT4P35916 1363 aa10.31□□□□□ -0.76
SORT1-205ENST00000483508 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
SORT1-205ENST00000483508 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
SORT1-205ENST00000483508 PPP4R3CPQ6ZMV5 832 aa10.31□□□□□ -0.76
SORT1-205ENST00000483508 COL23A1Q86Y22 540 aaPredicted RBP10.31□□□□□ -0.76
SORT1-205ENST00000483508 SMARCC1Q92922 1105 aaPredicted RBP10.31□□□□□ -0.76
SORT1-205ENST00000483508 AK7Q96M32 723 aa10.31□□□□□ -0.76
SORT1-205ENST00000483508 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
SORT1-205ENST00000483508 PALLDQ8WX93 1383 aa10.3□□□□□ -0.76
SORT1-205ENST00000483508 DIAPH1O60610 1272 aaKnown RBP10.3□□□□□ -0.76
SORT1-205ENST00000483508 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
SORT1-205ENST00000483508 TMPOP42166 694 aaKnown RBP10.3□□□□□ -0.76
SORT1-205ENST00000483508 C1QTNF8P60827 252 aa10.3□□□□□ -0.76
SORT1-205ENST00000483508 NLGN2Q8NFZ4 835 aa10.3□□□□□ -0.76
SORT1-205ENST00000483508 SPG7Q9UQ90 795 aa10.3□□□□□ -0.76
SORT1-205ENST00000483508 LAS1LQ9Y4W2 734 aaKnown RBP10.3□□□□□ -0.76
SORT1-205ENST00000483508 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
SORT1-205ENST00000483508 KIF24Q5T7B8 1368 aa10.29□□□□□ -0.76
SORT1-205ENST00000483508 PHF14O94880 888 aa10.29□□□□□ -0.76
SORT1-205ENST00000483508 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
SORT1-205ENST00000483508 ZNF428Q96B54 188 aa10.29□□□□□ -0.76
SORT1-205ENST00000483508 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
SORT1-205ENST00000483508 DLG5Q8TDM6 1919 aa10.29□□□□□ -0.76
SORT1-205ENST00000483508 U2SURPO15042 1029 aaKnown RBP10.28□□□□□ -0.76
SORT1-205ENST00000483508 FCHSD2O94868 740 aa10.28□□□□□ -0.76
SORT1-205ENST00000483508 BECN1Q14457 450 aa10.28□□□□□ -0.76
SORT1-205ENST00000483508 FTSJ3Q8IY81 847 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms