RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 PPP2R1AP30153 589 aa31.6■■■□□ 2.65
RHBDF1-208ENST00000482904 COL23A1Q86Y22 540 aaPredicted RBP31.6■■■□□ 2.65
RHBDF1-208ENST00000482904 LINC00116Q8NCU8 138 aa31.6■■■□□ 2.65
RHBDF1-208ENST00000482904 FLAD1Q8NFF5 587 aa31.6■■■□□ 2.65
RHBDF1-208ENST00000482904 RBM42Q9BTD8 480 aaKnown RBP31.6■■■□□ 2.65
RHBDF1-208ENST00000482904 FHDC1Q9C0D6 1143 aaPredicted RBP31.59■■■□□ 2.65
RHBDF1-208ENST00000482904 DCAF8L1A6NGE4 600 aa31.58■■■□□ 2.65
RHBDF1-208ENST00000482904 PHF14O94880 888 aa31.58■■■□□ 2.65
RHBDF1-208ENST00000482904 ITPK1Q13572 414 aa31.57■■■□□ 2.64
RHBDF1-208ENST00000482904 MTHFSDQ2M296 383 aaKnown RBP31.57■■■□□ 2.64
RHBDF1-208ENST00000482904 NFATC2IPQ8NCF5 419 aa31.56■■■□□ 2.64
RHBDF1-208ENST00000482904 NUDCQ9Y266 331 aa31.56■■■□□ 2.64
RHBDF1-208ENST00000482904 KLHL34Q8N239 644 aa31.55■■■□□ 2.64
RHBDF1-208ENST00000482904 SCN11AQ9UI33 1791 aa31.54■■■□□ 2.64
RHBDF1-208ENST00000482904 GNPATO15228 680 aa31.54■■■□□ 2.64
RHBDF1-208ENST00000482904 MSL1Q68DK7 614 aa31.54■■■□□ 2.64
RHBDF1-208ENST00000482904 SYT17Q9BSW7 474 aa31.52■■■□□ 2.64
RHBDF1-208ENST00000482904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.51■■■□□ 2.63
RHBDF1-208ENST00000482904 PTCD1O75127 700 aaKnown RBP31.51■■■□□ 2.63
RHBDF1-208ENST00000482904 SSFA2P28290 1259 aa31.51■■■□□ 2.63
RHBDF1-208ENST00000482904 SLC52A2Q9HAB3 445 aa31.51■■■□□ 2.63
RHBDF1-208ENST00000482904 MRC1P22897 1456 aa31.51■■■□□ 2.63
RHBDF1-208ENST00000482904 RNMTO43148 476 aaKnown RBP31.5■■■□□ 2.63
RHBDF1-208ENST00000482904 GAS2L2Q8NHY3 880 aa31.5■■■□□ 2.63
RHBDF1-208ENST00000482904 LGR6Q9HBX8 967 aa31.5■■■□□ 2.63
RHBDF1-208ENST00000482904 UBR3Q6ZT12 1888 aa31.5■■■□□ 2.63
RHBDF1-208ENST00000482904 COL24A1Q17RW2 1714 aa31.49■■■□□ 2.63
RHBDF1-208ENST00000482904 ZNF831Q5JPB2 1677 aa31.49■■■□□ 2.63
RHBDF1-208ENST00000482904 AMIGO3Q86WK7 504 aa31.49■■■□□ 2.63
RHBDF1-208ENST00000482904 SLC4A9Q96Q91 983 aa31.49■■■□□ 2.63
RHBDF1-208ENST00000482904 MAP3K5Q99683 1374 aa31.48■■■□□ 2.63
RHBDF1-208ENST00000482904 U2AF1L5P0DN76 240 aaPredicted RBP31.48■■■□□ 2.63
RHBDF1-208ENST00000482904 PRKAR2BP31323 418 aa31.48■■■□□ 2.63
RHBDF1-208ENST00000482904 U2AF1Q01081 240 aaKnown RBP eCLIP31.48■■■□□ 2.63
RHBDF1-208ENST00000482904 SMIM5Q71RC9 77 aa31.48■■■□□ 2.63
RHBDF1-208ENST00000482904 RSPH6AQ9H0K4 717 aa31.45■■■□□ 2.63
RHBDF1-208ENST00000482904 RTCBQ9Y3I0 505 aaKnown RBP31.44■■■□□ 2.62
RHBDF1-208ENST00000482904 ADAMTS7Q9UKP4 1686 aa31.44■■■□□ 2.62
RHBDF1-208ENST00000482904 CNTNAP4Q9C0A0 1308 aa31.44■■■□□ 2.62
RHBDF1-208ENST00000482904 COL5A3P25940 1745 aaPredicted RBP31.44■■■□□ 2.62
RHBDF1-208ENST00000482904 GNAT3A8MTJ3 354 aa31.43■■■□□ 2.62
RHBDF1-208ENST00000482904 DDX10Q13206 875 aaKnown RBP31.4■■■□□ 2.62
RHBDF1-208ENST00000482904 VIRMAQ69YN4 1812 aaKnown RBP31.4■■■□□ 2.62
RHBDF1-208ENST00000482904 TEFQ10587 303 aa31.39■■■□□ 2.62
RHBDF1-208ENST00000482904 SLC39A6Q13433 755 aa31.39■■■□□ 2.62
RHBDF1-208ENST00000482904 RC3H1Q5TC82 1133 aaKnown RBP31.39■■■□□ 2.62
RHBDF1-208ENST00000482904 PHACTR3Q96KR7 559 aa31.39■■■□□ 2.62
RHBDF1-208ENST00000482904 TJP1Q07157 1748 aa31.38■■■□□ 2.61
RHBDF1-208ENST00000482904 TRAPPC3LQ5T215 181 aa31.38■■■□□ 2.61
RHBDF1-208ENST00000482904 FCHSD2O94868 740 aa31.37■■■□□ 2.61
RHBDF1-208ENST00000482904 CICQ96RK0 1608 aaPredicted RBP31.37■■■□□ 2.61
RHBDF1-208ENST00000482904 ADRA2BP18089 450 aa31.36■■■□□ 2.61
RHBDF1-208ENST00000482904 CRKLP46109 303 aaKnown RBP31.36■■■□□ 2.61
RHBDF1-208ENST00000482904 TTC5Q8N0Z6 440 aa31.36■■■□□ 2.61
RHBDF1-208ENST00000482904 KCPQ6ZWJ8 1503 aa31.34■■■□□ 2.61
RHBDF1-208ENST00000482904 RPS6KA4O75676 772 aa31.34■■■□□ 2.61
RHBDF1-208ENST00000482904 NEFMP07197 916 aa31.33■■■□□ 2.61
RHBDF1-208ENST00000482904 RALBP1Q15311 655 aa31.33■■■□□ 2.61
RHBDF1-208ENST00000482904 DNAJC10Q8IXB1 793 aa31.33■■■□□ 2.61
RHBDF1-208ENST00000482904 IL17REQ8NFR9 667 aa31.33■■■□□ 2.61
RHBDF1-208ENST00000482904 RFC4P35249 363 aa31.32■■■□□ 2.6
RHBDF1-208ENST00000482904 NLGN2Q8NFZ4 835 aa31.32■■■□□ 2.6
RHBDF1-208ENST00000482904 PELP1Q8IZL8 1130 aaKnown RBP31.31■■■□□ 2.6
RHBDF1-208ENST00000482904 RTF1Q92541 710 aaKnown RBP31.31■■■□□ 2.6
RHBDF1-208ENST00000482904 ARHGEF1Q92888 912 aaKnown RBP31.31■■■□□ 2.6
RHBDF1-208ENST00000482904 ZEB1P37275 1124 aaPredicted RBP31.29■■■□□ 2.6
RHBDF1-208ENST00000482904 GPR162Q16538 588 aa31.29■■■□□ 2.6
RHBDF1-208ENST00000482904 CEMIPQ8WUJ3 1361 aa31.29■■■□□ 2.6
RHBDF1-208ENST00000482904 YY1P25490 414 aa31.28■■■□□ 2.6
RHBDF1-208ENST00000482904 CCDC87Q9NVE4 849 aa31.28■■■□□ 2.6
RHBDF1-208ENST00000482904 CD2APQ9Y5K6 639 aa31.27■■■□□ 2.6
RHBDF1-208ENST00000482904 UBR2Q8IWV8 1755 aa31.27■■■□□ 2.6
RHBDF1-208ENST00000482904 VSIG10Q8N0Z9 540 aa31.26■■■□□ 2.59
RHBDF1-208ENST00000482904 C4AP0C0L4 1744 aa31.26■■■□□ 2.59
RHBDF1-208ENST00000482904 MYH14Q7Z406 1995 aaKnown RBP31.25■■■□□ 2.59
RHBDF1-208ENST00000482904 MMP10P09238 476 aa31.25■■■□□ 2.59
RHBDF1-208ENST00000482904 ZNF790Q6PG37 636 aa31.25■■■□□ 2.59
RHBDF1-208ENST00000482904 NLGN1Q8N2Q7 840 aa31.25■■■□□ 2.59
RHBDF1-208ENST00000482904 CYP19A1P11511 503 aaPredicted RBP31.24■■■□□ 2.59
RHBDF1-208ENST00000482904 INTS5Q6P9B9 1019 aaKnown RBP31.24■■■□□ 2.59
RHBDF1-208ENST00000482904 SIPA1L3O60292 1781 aaPredicted RBP31.24■■■□□ 2.59
RHBDF1-208ENST00000482904 MYBBP1AQ9BQG0 1328 aaKnown RBP31.24■■■□□ 2.59
RHBDF1-208ENST00000482904 MCM10Q7L590 875 aa31.23■■■□□ 2.59
RHBDF1-208ENST00000482904 BTBD11A6QL63 1104 aa31.22■■■□□ 2.59
RHBDF1-208ENST00000482904 GYS1P13807 737 aa31.22■■■□□ 2.59
RHBDF1-208ENST00000482904 ZNF496Q96IT1 587 aaPredicted RBP31.22■■■□□ 2.59
RHBDF1-208ENST00000482904 MAPK8IP3Q9UPT6 1336 aa31.22■■■□□ 2.59
RHBDF1-208ENST00000482904 PNNQ9H307 717 aaKnown RBP31.21■■■□□ 2.59
RHBDF1-208ENST00000482904 HEG1Q9ULI3 1381 aa31.2■■■□□ 2.59
RHBDF1-208ENST00000482904 FMNL2Q96PY5 1086 aa31.2■■■□□ 2.59
RHBDF1-208ENST00000482904 SRP68Q9UHB9 627 aaKnown RBP31.2■■■□□ 2.59
RHBDF1-208ENST00000482904 ZBTB1Q9Y2K1 713 aa31.2■■■□□ 2.59
RHBDF1-208ENST00000482904 SOS1Q07889 1333 aaPredicted RBP31.2■■■□□ 2.58
RHBDF1-208ENST00000482904 USP42Q9H9J4 1324 aaKnown RBP31.2■■■□□ 2.58
RHBDF1-208ENST00000482904 HTATSF1O43719 755 aaKnown RBP31.19■■■□□ 2.58
RHBDF1-208ENST00000482904 STARD3NLO95772 234 aa31.19■■■□□ 2.58
RHBDF1-208ENST00000482904 DCTN1Q14203 1278 aa31.18■■■□□ 2.58
RHBDF1-208ENST00000482904 COL15A1P39059 1388 aa31.17■■■□□ 2.58
RHBDF1-208ENST00000482904 PARP3Q9Y6F1 533 aa31.17■■■□□ 2.58
RHBDF1-208ENST00000482904 ZPR1O75312 459 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms