RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHD6-209ENST00000482596 AMIGO3Q86WK7 504 aa10.06□□□□□ -0.8
CHD6-209ENST00000482596 ABTB2Q8N961 1025 aa10.06□□□□□ -0.8
CHD6-209ENST00000482596 GCC1Q96CN9 775 aa10.06□□□□□ -0.8
CHD6-209ENST00000482596 TOGARAM1Q9Y4F4 1720 aa10.06□□□□□ -0.8
CHD6-209ENST00000482596 SPATA31E1Q6ZUB1 1445 aa10.06□□□□□ -0.8
CHD6-209ENST00000482596 C5P01031 1676 aa10.06□□□□□ -0.8
CHD6-209ENST00000482596 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
CHD6-209ENST00000482596 CARD10Q9BWT7 1032 aa10.05□□□□□ -0.8
CHD6-209ENST00000482596 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
CHD6-209ENST00000482596 MAP2K1Q02750 393 aaPredicted RBP10.04□□□□□ -0.8
CHD6-209ENST00000482596 SLC17A8Q8NDX2 589 aa10.04□□□□□ -0.8
CHD6-209ENST00000482596 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
CHD6-209ENST00000482596 LTBP1Q14766 1721 aa10.04□□□□□ -0.8
CHD6-209ENST00000482596 ADAMTS7Q9UKP4 1686 aa10.03□□□□□ -0.8
CHD6-209ENST00000482596 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
CHD6-209ENST00000482596 GLTPD2A6NH11 291 aa10.03□□□□□ -0.8
CHD6-209ENST00000482596 DGKZQ13574 1117 aa10.03□□□□□ -0.8
CHD6-209ENST00000482596 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
CHD6-209ENST00000482596 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
CHD6-209ENST00000482596 DPEP1P16444 411 aa10.02□□□□□ -0.81
CHD6-209ENST00000482596 IFNL1Q8IU54 200 aa10.02□□□□□ -0.81
CHD6-209ENST00000482596 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
CHD6-209ENST00000482596 PASKQ96RG2 1323 aa10.02□□□□□ -0.81
CHD6-209ENST00000482596 TIAM2Q8IVF5 1701 aa10.02□□□□□ -0.81
CHD6-209ENST00000482596 NSD2O96028 1365 aa10.01□□□□□ -0.81
CHD6-209ENST00000482596 PIK3C2GO75747 1445 aa10.01□□□□□ -0.81
CHD6-209ENST00000482596 THSD7BQ9C0I4 1608 aa10.01□□□□□ -0.81
CHD6-209ENST00000482596 TGFB2P61812 414 aa10.01□□□□□ -0.81
CHD6-209ENST00000482596 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
CHD6-209ENST00000482596 POGKQ9P215 609 aa10.01□□□□□ -0.81
CHD6-209ENST00000482596 CCDC88AQ3V6T2 1871 aa10.01□□□□□ -0.81
CHD6-209ENST00000482596 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
CHD6-209ENST00000482596 COL6A3P12111 3177 aa10□□□□□ -0.81
CHD6-209ENST00000482596 UBR3Q6ZT12 1888 aa10□□□□□ -0.81
CHD6-209ENST00000482596 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
CHD6-209ENST00000482596 CSB-PGBD3P0DP91 1061 aa10□□□□□ -0.81
CHD6-209ENST00000482596 CHRM1P11229 460 aaPredicted RBP10□□□□□ -0.81
CHD6-209ENST00000482596 LHX8Q68G74 356 aa10□□□□□ -0.81
CHD6-209ENST00000482596 MPNDQ8N594 471 aa10□□□□□ -0.81
CHD6-209ENST00000482596 SYTL4Q96C24 671 aaPredicted RBP10□□□□□ -0.81
CHD6-209ENST00000482596 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 WASLO00401 505 aaPredicted RBP9.99□□□□□ -0.81
CHD6-209ENST00000482596 KCNA3P22001 575 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 TIE1P35590 1138 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 RASSF7Q02833 373 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 FAM50AQ14320 339 aaKnown RBP9.99□□□□□ -0.81
CHD6-209ENST00000482596 NLRP13Q86W25 1043 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 DCAF5Q96JK2 942 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 BMP2KQ9NSY1 1161 aaPredicted RBP9.99□□□□□ -0.81
CHD6-209ENST00000482596 ACEP12821 1306 aa9.99□□□□□ -0.81
CHD6-209ENST00000482596 EIF3AQ14152 1382 aaKnown RBP9.99□□□□□ -0.81
CHD6-209ENST00000482596 RASSF10A6NK89 507 aa9.98□□□□□ -0.81
CHD6-209ENST00000482596 PHF14O94880 888 aa9.98□□□□□ -0.81
CHD6-209ENST00000482596 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
CHD6-209ENST00000482596 DEFB115Q30KQ5 88 aa9.98□□□□□ -0.81
CHD6-209ENST00000482596 FLAD1Q8NFF5 587 aa9.98□□□□□ -0.81
CHD6-209ENST00000482596 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
CHD6-209ENST00000482596 SLIT3O75094 1523 aa9.97□□□□□ -0.81
CHD6-209ENST00000482596 NUDT16Q96DE0 195 aaKnown RBP9.97□□□□□ -0.81
CHD6-209ENST00000482596 POLR3AO14802 1390 aaPredicted RBP9.97□□□□□ -0.81
CHD6-209ENST00000482596 KDM6AO15550 1401 aaPredicted RBP9.97□□□□□ -0.81
CHD6-209ENST00000482596 C4BP0C0L5 1744 aa9.96□□□□□ -0.81
CHD6-209ENST00000482596 MMP10P09238 476 aa9.96□□□□□ -0.82
CHD6-209ENST00000482596 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.82
CHD6-209ENST00000482596 BEGAINQ9BUH8 593 aa9.96□□□□□ -0.82
CHD6-209ENST00000482596 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
CHD6-209ENST00000482596 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
CHD6-209ENST00000482596 CPSF1Q10570 1443 aaKnown RBP9.96□□□□□ -0.82
CHD6-209ENST00000482596 RGL3Q3MIN7 710 aa9.95□□□□□ -0.82
CHD6-209ENST00000482596 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
CHD6-209ENST00000482596 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
CHD6-209ENST00000482596 MEGF6O75095 1541 aa9.94□□□□□ -0.82
CHD6-209ENST00000482596 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
CHD6-209ENST00000482596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
CHD6-209ENST00000482596 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
CHD6-209ENST00000482596 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
CHD6-209ENST00000482596 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
CHD6-209ENST00000482596 MKI67P46013 3256 aaKnown RBP9.93□□□□□ -0.82
CHD6-209ENST00000482596 ITGBL1O95965 494 aaPredicted RBP9.93□□□□□ -0.82
CHD6-209ENST00000482596 IL2RBP14784 551 aa9.93□□□□□ -0.82
CHD6-209ENST00000482596 C14orf93Q9H972 538 aaKnown RBP9.93□□□□□ -0.82
CHD6-209ENST00000482596 GRM1Q13255 1194 aa9.92□□□□□ -0.82
CHD6-209ENST00000482596 DALRD3Q5D0E6 543 aaKnown RBP9.92□□□□□ -0.82
CHD6-209ENST00000482596 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
CHD6-209ENST00000482596 TMEM106CQ9BVX2 250 aa9.92□□□□□ -0.82
CHD6-209ENST00000482596 PIM2Q9P1W9 311 aa9.92□□□□□ -0.82
CHD6-209ENST00000482596 ROCK1Q13464 1354 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 USP47Q96K76 1375 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 C7P10643 843 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 NLRP6P59044 892 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 ARHGEF25Q86VW2 580 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 CAPNS2Q96L46 248 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 AK7Q96M32 723 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 TRAK1Q9UPV9 953 aa9.91□□□□□ -0.82
CHD6-209ENST00000482596 LMNB1P20700 586 aa9.9□□□□□ -0.82
CHD6-209ENST00000482596 CYP4F22Q6NT55 531 aa9.9□□□□□ -0.82
CHD6-209ENST00000482596 GPR101Q96P66 508 aaPredicted RBP9.9□□□□□ -0.82
CHD6-209ENST00000482596 C4AP0C0L4 1744 aa9.9□□□□□ -0.83
CHD6-209ENST00000482596 TRIOBPQ9H2D6 2365 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms