RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 VPS72Q15906 364 aa11.38□□□□□ -0.59
ERGIC3-214ENST00000482338 KRT24Q2M2I5 525 aa11.38□□□□□ -0.59
ERGIC3-214ENST00000482338 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
ERGIC3-214ENST00000482338 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
ERGIC3-214ENST00000482338 AFF2P51816 1311 aa11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 ATRNO75882 1429 aa11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 PLIN1O60240 522 aa11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 TWISTNBQ3B726 338 aaPredicted RBP11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 USP21Q9UK80 565 aa11.37□□□□□ -0.59
ERGIC3-214ENST00000482338 ELL2O00472 640 aaPredicted RBP11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 VAMP4O75379 141 aa11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
ERGIC3-214ENST00000482338 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 NHSQ6T4R5 1651 aa11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 BTAF1O14981 1849 aa11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 TJP1Q07157 1748 aa11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
ERGIC3-214ENST00000482338 KCNQ3O43525 872 aa11.34□□□□□ -0.59
ERGIC3-214ENST00000482338 ALDH1L2Q3SY69 923 aa11.34□□□□□ -0.59
ERGIC3-214ENST00000482338 ZNF428Q96B54 188 aa11.34□□□□□ -0.59
ERGIC3-214ENST00000482338 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
ERGIC3-214ENST00000482338 EXOC5O00471 708 aa11.33□□□□□ -0.6
ERGIC3-214ENST00000482338 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
ERGIC3-214ENST00000482338 DDB1Q16531 1140 aa11.33□□□□□ -0.6
ERGIC3-214ENST00000482338 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
ERGIC3-214ENST00000482338 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
ERGIC3-214ENST00000482338 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
ERGIC3-214ENST00000482338 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 CABP4P57796 275 aa11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 C20orf194Q5TEA3 1177 aa11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 FRAT1Q92837 279 aaPredicted RBP11.32□□□□□ -0.6
ERGIC3-214ENST00000482338 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 SLC39A6Q13433 755 aa11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 TNNQ9UQP3 1299 aa11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
ERGIC3-214ENST00000482338 LY75O60449 1722 aa11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 ZNF831Q5JPB2 1677 aa11.3□□□□□ -0.6
ERGIC3-214ENST00000482338 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
ERGIC3-214ENST00000482338 BCL9O00512 1426 aa11.29□□□□□ -0.6
ERGIC3-214ENST00000482338 MARCH10Q8NA82 808 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-214ENST00000482338 EXOC6Q8TAG9 804 aa11.29□□□□□ -0.6
ERGIC3-214ENST00000482338 CRBNQ96SW2 442 aa11.29□□□□□ -0.6
ERGIC3-214ENST00000482338 NOB1Q9ULX3 412 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-214ENST00000482338 RGS12O14924 1447 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 RREB1Q92766 1687 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 HOXB7P09629 217 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 ERICH6BQ5W0A0 696 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 ZKSCAN2Q63HK3 967 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
ERGIC3-214ENST00000482338 A0A0G2JS52 829 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 PRAMEF22A3QJZ6 481 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 RLBP1P12271 317 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 TRIM27P14373 513 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 MYT1Q01538 1121 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 TTC5Q8N0Z6 440 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 ZNF496Q96IT1 587 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 QTRT2Q9H974 415 aaKnown RBP11.27□□□□□ -0.61
ERGIC3-214ENST00000482338 CCDC30Q5VVM6 783 aa11.26□□□□□ -0.61
ERGIC3-214ENST00000482338 PIGBQ92521 554 aa11.26□□□□□ -0.61
ERGIC3-214ENST00000482338 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
ERGIC3-214ENST00000482338 FMNL2Q96PY5 1086 aa11.26□□□□□ -0.61
ERGIC3-214ENST00000482338 MYH14Q7Z406 1995 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-214ENST00000482338 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
ERGIC3-214ENST00000482338 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 SLC4A2P04920 1241 aa11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 EIF2S2P20042 333 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 G2E3Q7L622 706 aa11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 DZIP1LQ8IYY4 767 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 STK31Q9BXU1 1019 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms