RNA–Protein interactions for RNA: ENST00000481368.5

SNHG12-209, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-209ENST00000481368 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
SNHG12-209ENST00000481368 C1orf141Q5JVX7 400 aa19.49■□□□□ 0.71
SNHG12-209ENST00000481368 MTHFSDQ2M296 383 aaKnown RBP19.49■□□□□ 0.71
SNHG12-209ENST00000481368 ADAMTS7Q9UKP4 1686 aa19.48■□□□□ 0.71
SNHG12-209ENST00000481368 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
SNHG12-209ENST00000481368 SLC16A10Q8TF71 515 aa19.48■□□□□ 0.71
SNHG12-209ENST00000481368 FHDC1Q9C0D6 1143 aaPredicted RBP19.48■□□□□ 0.71
SNHG12-209ENST00000481368 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
SNHG12-209ENST00000481368 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
SNHG12-209ENST00000481368 CABP4P57796 275 aa19.47■□□□□ 0.71
SNHG12-209ENST00000481368 AKAP4Q5JQC9 854 aa19.47■□□□□ 0.71
SNHG12-209ENST00000481368 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
SNHG12-209ENST00000481368 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
SNHG12-209ENST00000481368 U2SURPO15042 1029 aaKnown RBP19.46■□□□□ 0.71
SNHG12-209ENST00000481368 ATP6V1AP38606 617 aa19.46■□□□□ 0.71
SNHG12-209ENST00000481368 ARXQ96QS3 562 aa19.46■□□□□ 0.71
SNHG12-209ENST00000481368 MRC1P22897 1456 aa19.45■□□□□ 0.7
SNHG12-209ENST00000481368 SYT17Q9BSW7 474 aa19.45■□□□□ 0.7
SNHG12-209ENST00000481368 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
SNHG12-209ENST00000481368 AK7Q96M32 723 aa19.44■□□□□ 0.7
SNHG12-209ENST00000481368 RNMTO43148 476 aaKnown RBP19.43■□□□□ 0.7
SNHG12-209ENST00000481368 MSH5O43196 834 aa19.43■□□□□ 0.7
SNHG12-209ENST00000481368 RBM42Q9BTD8 480 aaKnown RBP19.43■□□□□ 0.7
SNHG12-209ENST00000481368 TJP1Q07157 1748 aa19.43■□□□□ 0.7
SNHG12-209ENST00000481368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.42■□□□□ 0.7
SNHG12-209ENST00000481368 PHF14O94880 888 aa19.42■□□□□ 0.7
SNHG12-209ENST00000481368 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
SNHG12-209ENST00000481368 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
SNHG12-209ENST00000481368 SLC52A2Q9HAB3 445 aa19.41■□□□□ 0.7
SNHG12-209ENST00000481368 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
SNHG12-209ENST00000481368 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
SNHG12-209ENST00000481368 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
SNHG12-209ENST00000481368 GNPATO15228 680 aa19.4■□□□□ 0.7
SNHG12-209ENST00000481368 SSFA2P28290 1259 aa19.39■□□□□ 0.69
SNHG12-209ENST00000481368 PRKAR2BP31323 418 aa19.39■□□□□ 0.69
SNHG12-209ENST00000481368 FLAD1Q8NFF5 587 aa19.39■□□□□ 0.69
SNHG12-209ENST00000481368 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
SNHG12-209ENST00000481368 SIPA1L3O60292 1781 aaPredicted RBP19.39■□□□□ 0.69
SNHG12-209ENST00000481368 POLD1P28340 1107 aa19.38■□□□□ 0.69
SNHG12-209ENST00000481368 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
SNHG12-209ENST00000481368 KCPQ6ZWJ8 1503 aa19.38■□□□□ 0.69
SNHG12-209ENST00000481368 HMGB2P26583 209 aaKnown RBP19.37■□□□□ 0.69
SNHG12-209ENST00000481368 IL17REQ8NFR9 667 aa19.37■□□□□ 0.69
SNHG12-209ENST00000481368 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
SNHG12-209ENST00000481368 C4AP0C0L4 1744 aa19.36■□□□□ 0.69
SNHG12-209ENST00000481368 CNTNAP4Q9C0A0 1308 aa19.36■□□□□ 0.69
SNHG12-209ENST00000481368 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
SNHG12-209ENST00000481368 NLGN2Q8NFZ4 835 aa19.36■□□□□ 0.69
SNHG12-209ENST00000481368 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
SNHG12-209ENST00000481368 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
SNHG12-209ENST00000481368 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
SNHG12-209ENST00000481368 KLHL34Q8N239 644 aa19.34■□□□□ 0.69
SNHG12-209ENST00000481368 GAS2L2Q8NHY3 880 aa19.34■□□□□ 0.69
SNHG12-209ENST00000481368 GNAT3A8MTJ3 354 aa19.33■□□□□ 0.69
SNHG12-209ENST00000481368 NUDCQ9Y266 331 aa19.33■□□□□ 0.69
SNHG12-209ENST00000481368 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
SNHG12-209ENST00000481368 DNAJC10Q8IXB1 793 aa19.32■□□□□ 0.68
SNHG12-209ENST00000481368 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
SNHG12-209ENST00000481368 CEMIPQ8WUJ3 1361 aa19.32■□□□□ 0.68
SNHG12-209ENST00000481368 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
SNHG12-209ENST00000481368 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
SNHG12-209ENST00000481368 FCHSD2O94868 740 aa19.31■□□□□ 0.68
SNHG12-209ENST00000481368 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
SNHG12-209ENST00000481368 TRAPPC3LQ5T215 181 aa19.3■□□□□ 0.68
SNHG12-209ENST00000481368 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
SNHG12-209ENST00000481368 CYP19A1P11511 503 aaPredicted RBP19.27■□□□□ 0.68
SNHG12-209ENST00000481368 KCNQ3O43525 872 aa19.27■□□□□ 0.67
SNHG12-209ENST00000481368 GYS1P13807 737 aa19.27■□□□□ 0.67
SNHG12-209ENST00000481368 ADRA2BP18089 450 aa19.27■□□□□ 0.67
SNHG12-209ENST00000481368 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.67
SNHG12-209ENST00000481368 PLEKHF1Q96S99 279 aa19.27■□□□□ 0.67
SNHG12-209ENST00000481368 TEFQ10587 303 aa19.26■□□□□ 0.67
SNHG12-209ENST00000481368 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
SNHG12-209ENST00000481368 ZNF790Q6PG37 636 aa19.26■□□□□ 0.67
SNHG12-209ENST00000481368 MCM10Q7L590 875 aa19.26■□□□□ 0.67
SNHG12-209ENST00000481368 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
SNHG12-209ENST00000481368 CHD4Q14839 1912 aa19.25■□□□□ 0.67
SNHG12-209ENST00000481368 MMP10P09238 476 aa19.25■□□□□ 0.67
SNHG12-209ENST00000481368 RALBP1Q15311 655 aa19.25■□□□□ 0.67
SNHG12-209ENST00000481368 KIF13BQ9NQT8 1826 aa19.25■□□□□ 0.67
SNHG12-209ENST00000481368 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
SNHG12-209ENST00000481368 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
SNHG12-209ENST00000481368 CCDC87Q9NVE4 849 aa19.24■□□□□ 0.67
SNHG12-209ENST00000481368 ZBTB1Q9Y2K1 713 aa19.24■□□□□ 0.67
SNHG12-209ENST00000481368 CD2APQ9Y5K6 639 aa19.24■□□□□ 0.67
SNHG12-209ENST00000481368 KIAA1551Q9HCM1 1747 aa19.24■□□□□ 0.67
SNHG12-209ENST00000481368 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNHG12-209ENST00000481368 YY1P25490 414 aa19.23■□□□□ 0.67
SNHG12-209ENST00000481368 RFC4P35249 363 aa19.23■□□□□ 0.67
SNHG12-209ENST00000481368 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
SNHG12-209ENST00000481368 USP42Q9H9J4 1324 aaKnown RBP19.23■□□□□ 0.67
SNHG12-209ENST00000481368 HEG1Q9ULI3 1381 aa19.22■□□□□ 0.67
SNHG12-209ENST00000481368 TTC5Q8N0Z6 440 aa19.22■□□□□ 0.67
SNHG12-209ENST00000481368 FKBP8Q14318 412 aa19.21■□□□□ 0.67
SNHG12-209ENST00000481368 GPR162Q16538 588 aa19.21■□□□□ 0.67
SNHG12-209ENST00000481368 NLGN1Q8N2Q7 840 aa19.21■□□□□ 0.67
SNHG12-209ENST00000481368 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
SNHG12-209ENST00000481368 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
SNHG12-209ENST00000481368 N4BP2Q86UW6 1770 aaPredicted RBP19.2■□□□□ 0.66
SNHG12-209ENST00000481368 COL15A1P39059 1388 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms