RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 AVPP01185 164 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 SCTRP47872 440 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 NCOA4Q13772 614 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 DEPDC4Q8N2C3 294 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 LZTS3O60299 673 aaPredicted RBP11.69□□□□□ -0.54
CBX3-206ENST00000481057 LILRA1O75019 489 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
CBX3-206ENST00000481057 MYT1Q01538 1121 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 EML3Q32P44 896 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 PKDCCQ504Y2 493 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 ARID3AQ99856 593 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
CBX3-206ENST00000481057 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
CBX3-206ENST00000481057 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
CBX3-206ENST00000481057 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
CBX3-206ENST00000481057 RGS17Q9UGC6 210 aaPredicted RBP11.68□□□□□ -0.54
CBX3-206ENST00000481057 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
CBX3-206ENST00000481057 RFX1P22670 979 aa11.65□□□□□ -0.54
CBX3-206ENST00000481057 USP4Q13107 963 aa11.65□□□□□ -0.54
CBX3-206ENST00000481057 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
CBX3-206ENST00000481057 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
CBX3-206ENST00000481057 CBLBQ13191 982 aa11.64□□□□□ -0.55
CBX3-206ENST00000481057 SIRT1Q96EB6 747 aa11.64□□□□□ -0.55
CBX3-206ENST00000481057 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
CBX3-206ENST00000481057 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
CBX3-206ENST00000481057 CFAP43Q8NDM7 1665 aa11.63□□□□□ -0.55
CBX3-206ENST00000481057 CAPN5O15484 640 aaPredicted RBP11.63□□□□□ -0.55
CBX3-206ENST00000481057 SMCPP49901 116 aaPredicted RBP11.63□□□□□ -0.55
CBX3-206ENST00000481057 CTC1Q2NKJ3 1217 aa11.63□□□□□ -0.55
CBX3-206ENST00000481057 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
CBX3-206ENST00000481057 Q6ZVU0 165 aa11.63□□□□□ -0.55
CBX3-206ENST00000481057 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
CBX3-206ENST00000481057 ADH1AP07327 375 aa11.62□□□□□ -0.55
CBX3-206ENST00000481057 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
CBX3-206ENST00000481057 MEIOBQ8N635 442 aa11.62□□□□□ -0.55
CBX3-206ENST00000481057 MKRN1Q9UHC7 482 aaKnown RBP11.62□□□□□ -0.55
CBX3-206ENST00000481057 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CBX3-206ENST00000481057 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.61□□□□□ -0.55
CBX3-206ENST00000481057 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
CBX3-206ENST00000481057 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
CBX3-206ENST00000481057 PBXIP1Q96AQ6 731 aa11.61□□□□□ -0.55
CBX3-206ENST00000481057 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
CBX3-206ENST00000481057 PTPRGP23470 1445 aa11.6□□□□□ -0.55
CBX3-206ENST00000481057 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
CBX3-206ENST00000481057 GTF2IP78347 998 aa11.6□□□□□ -0.55
CBX3-206ENST00000481057 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
CBX3-206ENST00000481057 CYP2U1Q7Z449 544 aa11.6□□□□□ -0.55
CBX3-206ENST00000481057 TRIM50Q86XT4 487 aa11.6□□□□□ -0.55
CBX3-206ENST00000481057 VRTNQ9H8Y1 702 aa11.59□□□□□ -0.55
CBX3-206ENST00000481057 PCDHGA11Q9Y5H2 935 aa11.59□□□□□ -0.55
CBX3-206ENST00000481057 CUX1P39880 1505 aa11.59□□□□□ -0.55
CBX3-206ENST00000481057 MAGI3Q5TCQ9 1506 aa11.59□□□□□ -0.55
CBX3-206ENST00000481057 AXIN1O15169 862 aa11.58□□□□□ -0.56
CBX3-206ENST00000481057 CLDN10P78369 228 aa11.58□□□□□ -0.56
CBX3-206ENST00000481057 KDF1Q8NAX2 398 aaPredicted RBP11.58□□□□□ -0.56
CBX3-206ENST00000481057 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
CBX3-206ENST00000481057 ATP1A2P50993 1020 aa11.57□□□□□ -0.56
CBX3-206ENST00000481057 OGFOD1Q8N543 542 aa11.57□□□□□ -0.56
CBX3-206ENST00000481057 CD109Q6YHK3 1445 aa11.57□□□□□ -0.56
CBX3-206ENST00000481057 ST8SIA5O15466 376 aa11.56□□□□□ -0.56
CBX3-206ENST00000481057 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
CBX3-206ENST00000481057 AGBL1Q96MI9 1066 aa11.56□□□□□ -0.56
CBX3-206ENST00000481057 AAASQ9NRG9 546 aa11.56□□□□□ -0.56
CBX3-206ENST00000481057 KIAA1024Q9UPX6 916 aa11.56□□□□□ -0.56
CBX3-206ENST00000481057 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
CBX3-206ENST00000481057 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
CBX3-206ENST00000481057 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
CBX3-206ENST00000481057 RASA1P20936 1047 aa11.55□□□□□ -0.56
CBX3-206ENST00000481057 CRTC2Q53ET0 693 aaPredicted RBP11.55□□□□□ -0.56
CBX3-206ENST00000481057 POTEAQ6S8J7 498 aa11.55□□□□□ -0.56
CBX3-206ENST00000481057 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
CBX3-206ENST00000481057 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
CBX3-206ENST00000481057 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
CBX3-206ENST00000481057 USP17L15C9J2P7 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L10C9JJH3 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L13C9JLJ4 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L11C9JVI0 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L21D6R901 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L18D6R9N7 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L22D6RA61 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L17D6RBQ6 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L19D6RCP7 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L20D6RJB6 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 GNRH1P01148 92 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 BMP1P13497 986 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 PTGIRP43119 386 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 RELBQ01201 579 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 USP17L24Q0WX57 530 aa11.54□□□□□ -0.56
CBX3-206ENST00000481057 MRPL14Q6P1L8 145 aaKnown RBP11.54□□□□□ -0.56
CBX3-206ENST00000481057 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
CBX3-206ENST00000481057 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
CBX3-206ENST00000481057 PSME1Q06323 249 aa11.53□□□□□ -0.56
CBX3-206ENST00000481057 PTK7Q13308 1070 aa11.53□□□□□ -0.56
CBX3-206ENST00000481057 LARP1Q6PKG0 1096 aaKnown RBP11.53□□□□□ -0.56
CBX3-206ENST00000481057 Q6ZNB5 142 aa11.53□□□□□ -0.56
CBX3-206ENST00000481057 TRIM46Q7Z4K8 759 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms