RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 COL18A1P39060 1754 aa21.06■□□□□ 0.96
SH3D21-203ENST00000480549 PXDNQ92626 1479 aa21.06■□□□□ 0.96
SH3D21-203ENST00000480549 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
SH3D21-203ENST00000480549 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
SH3D21-203ENST00000480549 CACNA1FO60840 1977 aa21.05■□□□□ 0.96
SH3D21-203ENST00000480549 SIRT2Q8IXJ6 389 aa21.05■□□□□ 0.96
SH3D21-203ENST00000480549 NUCB1Q02818 461 aa21.03■□□□□ 0.96
SH3D21-203ENST00000480549 G2E3Q7L622 706 aa21.03■□□□□ 0.96
SH3D21-203ENST00000480549 TNS3Q68CZ2 1445 aa21.03■□□□□ 0.96
SH3D21-203ENST00000480549 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
SH3D21-203ENST00000480549 SOS1Q07889 1333 aaPredicted RBP21.02■□□□□ 0.96
SH3D21-203ENST00000480549 LGR6Q9HBX8 967 aa21.02■□□□□ 0.96
SH3D21-203ENST00000480549 ERBB3P21860 1342 aa21.01■□□□□ 0.95
SH3D21-203ENST00000480549 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
SH3D21-203ENST00000480549 AKAP4Q5JQC9 854 aa21.01■□□□□ 0.95
SH3D21-203ENST00000480549 ARXQ96QS3 562 aa21.01■□□□□ 0.95
SH3D21-203ENST00000480549 N4BP2Q86UW6 1770 aaPredicted RBP21.01■□□□□ 0.95
SH3D21-203ENST00000480549 SEC24BO95487 1268 aa21.01■□□□□ 0.95
SH3D21-203ENST00000480549 PLEKHO1Q53GL0 409 aaPredicted RBP21.01■□□□□ 0.95
SH3D21-203ENST00000480549 ATP10DQ9P241 1426 aa21■□□□□ 0.95
SH3D21-203ENST00000480549 ADAMTS7Q9UKP4 1686 aa21■□□□□ 0.95
SH3D21-203ENST00000480549 AMOTQ4VCS5 1084 aa21■□□□□ 0.95
SH3D21-203ENST00000480549 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
SH3D21-203ENST00000480549 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
SH3D21-203ENST00000480549 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
SH3D21-203ENST00000480549 CCDC30Q5VVM6 783 aa20.98■□□□□ 0.95
SH3D21-203ENST00000480549 OVOS2A0A0G2JMS6 1433 aa20.98■□□□□ 0.95
SH3D21-203ENST00000480549 CHD1LQ86WJ1 897 aa20.98■□□□□ 0.95
SH3D21-203ENST00000480549 ABCC6O95255 1503 aa20.98■□□□□ 0.95
SH3D21-203ENST00000480549 SPATA31A3Q5VYP0 1347 aa20.97■□□□□ 0.95
SH3D21-203ENST00000480549 STK31Q9BXU1 1019 aa20.97■□□□□ 0.95
SH3D21-203ENST00000480549 LNPKQ9C0E8 428 aa20.96■□□□□ 0.95
SH3D21-203ENST00000480549 F6X3S4 739 aa20.95■□□□□ 0.94
SH3D21-203ENST00000480549 MPRIPQ6WCQ1 1025 aa20.95■□□□□ 0.94
SH3D21-203ENST00000480549 BRINP3Q76B58 766 aa20.95■□□□□ 0.94
SH3D21-203ENST00000480549 CABLES1Q8TDN4 633 aa20.95■□□□□ 0.94
SH3D21-203ENST00000480549 EIF4A1P60842 406 aaKnown RBP20.95■□□□□ 0.94
SH3D21-203ENST00000480549 FLIIQ13045 1269 aa20.95■□□□□ 0.94
SH3D21-203ENST00000480549 MEIS3Q99687 375 aa20.95■□□□□ 0.94
SH3D21-203ENST00000480549 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
SH3D21-203ENST00000480549 NECTIN2Q92692 538 aa20.94■□□□□ 0.94
SH3D21-203ENST00000480549 FGD1P98174 961 aa20.94■□□□□ 0.94
SH3D21-203ENST00000480549 ANKRD44Q8N8A2 993 aa20.94■□□□□ 0.94
SH3D21-203ENST00000480549 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
SH3D21-203ENST00000480549 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
SH3D21-203ENST00000480549 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
SH3D21-203ENST00000480549 ANKRD45Q5TZF3 282 aa20.93■□□□□ 0.94
SH3D21-203ENST00000480549 CEP85Q6P2H3 762 aa20.92■□□□□ 0.94
SH3D21-203ENST00000480549 KCNQ3O43525 872 aa20.92■□□□□ 0.94
SH3D21-203ENST00000480549 TEFQ10587 303 aa20.92■□□□□ 0.94
SH3D21-203ENST00000480549 SCN11AQ9UI33 1791 aa20.91■□□□□ 0.94
SH3D21-203ENST00000480549 CPDO75976 1380 aa20.91■□□□□ 0.94
SH3D21-203ENST00000480549 SLC4A10Q6U841 1118 aa20.91■□□□□ 0.94
SH3D21-203ENST00000480549 RPAP2Q8IXW5 612 aaPredicted RBP20.91■□□□□ 0.94
SH3D21-203ENST00000480549 DCTPP1Q9H773 170 aa20.91■□□□□ 0.94
SH3D21-203ENST00000480549 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
SH3D21-203ENST00000480549 HDGFL1Q5TGJ6 251 aa20.91■□□□□ 0.94
SH3D21-203ENST00000480549 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
SH3D21-203ENST00000480549 HOXB7P09629 217 aa20.9■□□□□ 0.94
SH3D21-203ENST00000480549 FKBP5Q13451 457 aaPredicted RBP20.9■□□□□ 0.94
SH3D21-203ENST00000480549 MEGF6O75095 1541 aa20.9■□□□□ 0.94
SH3D21-203ENST00000480549 PDE4CQ08493 712 aa20.89■□□□□ 0.93
SH3D21-203ENST00000480549 CHRNA2Q15822 529 aa20.88■□□□□ 0.93
SH3D21-203ENST00000480549 NLRP2Q9NX02 1062 aa20.88■□□□□ 0.93
SH3D21-203ENST00000480549 PKD1L3Q7Z443 1732 aa20.88■□□□□ 0.93
SH3D21-203ENST00000480549 ABCA3Q99758 1704 aa20.88■□□□□ 0.93
SH3D21-203ENST00000480549 HEG1Q9ULI3 1381 aa20.87■□□□□ 0.93
SH3D21-203ENST00000480549 SOS2Q07890 1332 aaPredicted RBP20.87■□□□□ 0.93
SH3D21-203ENST00000480549 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
SH3D21-203ENST00000480549 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
SH3D21-203ENST00000480549 RAPGEF4Q8WZA2 1011 aa20.86■□□□□ 0.93
SH3D21-203ENST00000480549 KDM6AO15550 1401 aaPredicted RBP20.85■□□□□ 0.93
SH3D21-203ENST00000480549 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
SH3D21-203ENST00000480549 TBC1D32Q96NH3 1257 aa20.85■□□□□ 0.93
SH3D21-203ENST00000480549 BMP2KLQ5H9B9 411 aa20.85■□□□□ 0.93
SH3D21-203ENST00000480549 EIF2S2P20042 333 aaKnown RBP20.84■□□□□ 0.93
SH3D21-203ENST00000480549 CLCN1P35523 988 aa20.84■□□□□ 0.93
SH3D21-203ENST00000480549 L1TD1Q5T7N2 865 aaKnown RBP20.84■□□□□ 0.93
SH3D21-203ENST00000480549 NHSL1Q5SYE7 1610 aa20.84■□□□□ 0.93
SH3D21-203ENST00000480549 TATP17735 454 aaPredicted RBP20.83■□□□□ 0.93
SH3D21-203ENST00000480549 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.93
SH3D21-203ENST00000480549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.937e-8■□□□□ 9.6
SH3D21-203ENST00000480549 CSB-PGBD3P0DP91 1061 aa20.82■□□□□ 0.92
SH3D21-203ENST00000480549 UPF2Q9HAU5 1272 aaKnown RBP20.82■□□□□ 0.92
SH3D21-203ENST00000480549 GNAI2P04899 355 aa20.82■□□□□ 0.92
SH3D21-203ENST00000480549 PHKG2P15735 406 aa20.82■□□□□ 0.92
SH3D21-203ENST00000480549 GIGYF1O75420 1035 aaPredicted RBP20.81■□□□□ 0.92
SH3D21-203ENST00000480549 C5P01031 1676 aa20.81■□□□□ 0.92
SH3D21-203ENST00000480549 CHMP4AQ9BY43 222 aa20.81■□□□□ 0.92
SH3D21-203ENST00000480549 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
SH3D21-203ENST00000480549 MRC1P22897 1456 aa20.8■□□□□ 0.92
SH3D21-203ENST00000480549 GNAI3P08754 354 aa20.8■□□□□ 0.92
SH3D21-203ENST00000480549 PLEKHM2Q8IWE5 1019 aa20.79■□□□□ 0.92
SH3D21-203ENST00000480549 PARP4Q9UKK3 1724 aaKnown RBP20.79■□□□□ 0.92
SH3D21-203ENST00000480549 USP44Q9H0E7 712 aa20.79■□□□□ 0.92
SH3D21-203ENST00000480549 HMMRO75330 724 aa20.78■□□□□ 0.92
SH3D21-203ENST00000480549 SLC52A2Q9HAB3 445 aa20.78■□□□□ 0.92
SH3D21-203ENST00000480549 PRDM4Q9UKN5 801 aa20.78■□□□□ 0.92
SH3D21-203ENST00000480549 PRAMEF22A3QJZ6 481 aa20.77■□□□□ 0.92
SH3D21-203ENST00000480549 ANXA1P04083 346 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms