RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 COL23A1Q86Y22 540 aaPredicted RBP20.63■□□□□ 0.89
CDK9-203ENST00000480353 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
CDK9-203ENST00000480353 PHF14O94880 888 aa20.62■□□□□ 0.89
CDK9-203ENST00000480353 AKAP4Q5JQC9 854 aa20.62■□□□□ 0.89
CDK9-203ENST00000480353 SGIP1Q9BQI5 828 aa20.61■□□□□ 0.89
CDK9-203ENST00000480353 SYT17Q9BSW7 474 aa20.61■□□□□ 0.89
CDK9-203ENST00000480353 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
CDK9-203ENST00000480353 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
CDK9-203ENST00000480353 MSL1Q68DK7 614 aa20.6■□□□□ 0.89
CDK9-203ENST00000480353 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
CDK9-203ENST00000480353 UBR3Q6ZT12 1888 aa20.59■□□□□ 0.89
CDK9-203ENST00000480353 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
CDK9-203ENST00000480353 LINC00116Q8NCU8 138 aa20.59■□□□□ 0.89
CDK9-203ENST00000480353 NUDCQ9Y266 331 aa20.59■□□□□ 0.89
CDK9-203ENST00000480353 GNPATO15228 680 aa20.58■□□□□ 0.89
CDK9-203ENST00000480353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.57■□□□□ 0.88
CDK9-203ENST00000480353 SSFA2P28290 1259 aa20.57■□□□□ 0.88
CDK9-203ENST00000480353 COL24A1Q17RW2 1714 aa20.56■□□□□ 0.88
CDK9-203ENST00000480353 PTCD1O75127 700 aaKnown RBP20.56■□□□□ 0.88
CDK9-203ENST00000480353 ITPK1Q13572 414 aa20.56■□□□□ 0.88
CDK9-203ENST00000480353 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
CDK9-203ENST00000480353 RTCBQ9Y3I0 505 aaKnown RBP20.55■□□□□ 0.88
CDK9-203ENST00000480353 YY1P25490 414 aa20.54■□□□□ 0.88
CDK9-203ENST00000480353 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
CDK9-203ENST00000480353 GAS2L2Q8NHY3 880 aa20.54■□□□□ 0.88
CDK9-203ENST00000480353 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
CDK9-203ENST00000480353 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
CDK9-203ENST00000480353 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
CDK9-203ENST00000480353 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
CDK9-203ENST00000480353 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
CDK9-203ENST00000480353 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
CDK9-203ENST00000480353 GPR162Q16538 588 aa20.52■□□□□ 0.88
CDK9-203ENST00000480353 TRAPPC3LQ5T215 181 aa20.52■□□□□ 0.88
CDK9-203ENST00000480353 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
CDK9-203ENST00000480353 SMIM5Q71RC9 77 aa20.51■□□□□ 0.87
CDK9-203ENST00000480353 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
CDK9-203ENST00000480353 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
CDK9-203ENST00000480353 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.872e-8■■□□□ 12.7
CDK9-203ENST00000480353 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
CDK9-203ENST00000480353 NEFMP07197 916 aa20.49■□□□□ 0.87
CDK9-203ENST00000480353 TEFQ10587 303 aa20.49■□□□□ 0.87
CDK9-203ENST00000480353 RC3H1Q5TC82 1133 aaKnown RBP20.49■□□□□ 0.87
CDK9-203ENST00000480353 CNTNAP4Q9C0A0 1308 aa20.49■□□□□ 0.87
CDK9-203ENST00000480353 PRKAR2BP31323 418 aa20.48■□□□□ 0.87
CDK9-203ENST00000480353 RFC4P35249 363 aa20.48■□□□□ 0.87
CDK9-203ENST00000480353 AMIGO3Q86WK7 504 aa20.48■□□□□ 0.87
CDK9-203ENST00000480353 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
CDK9-203ENST00000480353 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
CDK9-203ENST00000480353 ADRA2BP18089 450 aa20.47■□□□□ 0.87
CDK9-203ENST00000480353 MRC1P22897 1456 aa20.46■□□□□ 0.87
CDK9-203ENST00000480353 SLC39A6Q13433 755 aa20.46■□□□□ 0.87
CDK9-203ENST00000480353 CHD4Q14839 1912 aa20.45■□□□□ 0.86
CDK9-203ENST00000480353 RPS6KA4O75676 772 aa20.45■□□□□ 0.86
CDK9-203ENST00000480353 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
CDK9-203ENST00000480353 NLGN2Q8NFZ4 835 aa20.45■□□□□ 0.86
CDK9-203ENST00000480353 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
CDK9-203ENST00000480353 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
CDK9-203ENST00000480353 CD2APQ9Y5K6 639 aa20.44■□□□□ 0.86
CDK9-203ENST00000480353 TJP1Q07157 1748 aa20.44■□□□□ 0.86
CDK9-203ENST00000480353 MYH14Q7Z406 1995 aaKnown RBP20.43■□□□□ 0.86
CDK9-203ENST00000480353 NLGN1Q8N2Q7 840 aa20.43■□□□□ 0.86
CDK9-203ENST00000480353 ARHGEF1Q92888 912 aaKnown RBP20.43■□□□□ 0.86
CDK9-203ENST00000480353 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
CDK9-203ENST00000480353 FCHSD2O94868 740 aa20.42■□□□□ 0.86
CDK9-203ENST00000480353 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
CDK9-203ENST00000480353 MMP10P09238 476 aa20.41■□□□□ 0.86
CDK9-203ENST00000480353 C4AP0C0L4 1744 aa20.4■□□□□ 0.86
CDK9-203ENST00000480353 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
CDK9-203ENST00000480353 PHACTR3Q96KR7 559 aa20.4■□□□□ 0.86
CDK9-203ENST00000480353 CICQ96RK0 1608 aaPredicted RBP20.4■□□□□ 0.86
CDK9-203ENST00000480353 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
CDK9-203ENST00000480353 PARP3Q9Y6F1 533 aa20.39■□□□□ 0.85
CDK9-203ENST00000480353 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
CDK9-203ENST00000480353 ZPR1O75312 459 aa20.38■□□□□ 0.85
CDK9-203ENST00000480353 RALBP1Q15311 655 aa20.38■□□□□ 0.85
CDK9-203ENST00000480353 VSIG10Q8N0Z9 540 aa20.38■□□□□ 0.85
CDK9-203ENST00000480353 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
CDK9-203ENST00000480353 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
CDK9-203ENST00000480353 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
CDK9-203ENST00000480353 BTBD11A6QL63 1104 aa20.37■□□□□ 0.85
CDK9-203ENST00000480353 STARD3NLO95772 234 aa20.37■□□□□ 0.85
CDK9-203ENST00000480353 KCPQ6ZWJ8 1503 aa20.37■□□□□ 0.85
CDK9-203ENST00000480353 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
CDK9-203ENST00000480353 GYS1P13807 737 aa20.36■□□□□ 0.85
CDK9-203ENST00000480353 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
CDK9-203ENST00000480353 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
CDK9-203ENST00000480353 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
CDK9-203ENST00000480353 INTS5Q6P9B9 1019 aaKnown RBP20.35■□□□□ 0.85
CDK9-203ENST00000480353 FMNL2Q96PY5 1086 aa20.35■□□□□ 0.85
CDK9-203ENST00000480353 TEX13AQ9BXU3 409 aaPredicted RBP20.35■□□□□ 0.85
CDK9-203ENST00000480353 MAPK8IP3Q9UPT6 1336 aa20.34■□□□□ 0.85
CDK9-203ENST00000480353 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
CDK9-203ENST00000480353 SRP68Q9UHB9 627 aaKnown RBP20.34■□□□□ 0.85
CDK9-203ENST00000480353 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
CDK9-203ENST00000480353 MCM10Q7L590 875 aa20.33■□□□□ 0.85
CDK9-203ENST00000480353 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
CDK9-203ENST00000480353 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
CDK9-203ENST00000480353 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
CDK9-203ENST00000480353 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
CDK9-203ENST00000480353 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms