RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 ADAMTS8Q9UP79 889 aa25.02■■□□□ 1.6
AGRN-208ENST00000479707 MAPK8IP3Q9UPT6 1336 aa25.02■■□□□ 1.6
AGRN-208ENST00000479707 SLC15A2Q16348 729 aa25.01■■□□□ 1.59
AGRN-208ENST00000479707 CCDC146Q8IYE0 955 aa25.01■■□□□ 1.59
AGRN-208ENST00000479707 RBM42Q9BTD8 480 aaKnown RBP25.01■■□□□ 1.59
AGRN-208ENST00000479707 LOC102724428A0A0B4J2F2 783 aa25■■□□□ 1.59
AGRN-208ENST00000479707 SIK1P57059 783 aa25■■□□□ 1.59
AGRN-208ENST00000479707 RTF1Q92541 710 aaKnown RBP25■■□□□ 1.59
AGRN-208ENST00000479707 TEFQ10587 303 aa24.99■■□□□ 1.59
AGRN-208ENST00000479707 DCTN1Q14203 1278 aa24.99■■□□□ 1.59
AGRN-208ENST00000479707 ZNF827Q17R98 1081 aa24.99■■□□□ 1.59
AGRN-208ENST00000479707 MCM10Q7L590 875 aa24.99■■□□□ 1.59
AGRN-208ENST00000479707 ADAMTS7Q9UKP4 1686 aa24.99■■□□□ 1.59
AGRN-208ENST00000479707 DLG5Q8TDM6 1919 aa24.98■■□□□ 1.59
AGRN-208ENST00000479707 PAPPAQ13219 1627 aa24.98■■□□□ 1.59
AGRN-208ENST00000479707 ATP6V1AP38606 617 aa24.98■■□□□ 1.59
AGRN-208ENST00000479707 SLC39A6Q13433 755 aa24.98■■□□□ 1.59
AGRN-208ENST00000479707 PTCD1O75127 700 aaKnown RBP24.97■■□□□ 1.59
AGRN-208ENST00000479707 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
AGRN-208ENST00000479707 AKT1S1Q96B36 256 aa24.96■■□□□ 1.59
AGRN-208ENST00000479707 MRS2Q9HD23 443 aa24.96■■□□□ 1.59
AGRN-208ENST00000479707 MRC1P22897 1456 aa24.96■■□□□ 1.59
AGRN-208ENST00000479707 TAF1LQ8IZX4 1826 aa24.96■■□□□ 1.59
AGRN-208ENST00000479707 C5P01031 1676 aa24.95■■□□□ 1.58
AGRN-208ENST00000479707 ITPK1Q13572 414 aa24.94■■□□□ 1.58
AGRN-208ENST00000479707 SLC4A9Q96Q91 983 aa24.94■■□□□ 1.58
AGRN-208ENST00000479707 PDGFDQ9GZP0 370 aaPredicted RBP24.94■■□□□ 1.58
AGRN-208ENST00000479707 TFCP2L1Q9NZI6 479 aa24.94■■□□□ 1.58
AGRN-208ENST00000479707 HTATSF1O43719 755 aaKnown RBP24.93■■□□□ 1.58
AGRN-208ENST00000479707 RUNDC1Q96C34 613 aa24.93■■□□□ 1.58
AGRN-208ENST00000479707 RRP7AQ9Y3A4 280 aaKnown RBP24.93■■□□□ 1.58
AGRN-208ENST00000479707 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
AGRN-208ENST00000479707 NEUROD2Q15784 382 aa24.92■■□□□ 1.58
AGRN-208ENST00000479707 LINC00116Q8NCU8 138 aa24.92■■□□□ 1.58
AGRN-208ENST00000479707 SIPA1L3O60292 1781 aaPredicted RBP24.91■■□□□ 1.58
AGRN-208ENST00000479707 RIPK4P57078 832 aa24.91■■□□□ 1.58
AGRN-208ENST00000479707 TMPOP42166 694 aaKnown RBP24.9■■□□□ 1.58
AGRN-208ENST00000479707 THUMPD2Q9BTF0 503 aaKnown RBP24.9■■□□□ 1.58
AGRN-208ENST00000479707 TUBGCP6Q96RT7 1819 aa24.89■■□□□ 1.58
AGRN-208ENST00000479707 BTBD11A6QL63 1104 aa24.89■■□□□ 1.58
AGRN-208ENST00000479707 TTC5Q8N0Z6 440 aa24.89■■□□□ 1.58
AGRN-208ENST00000479707 C4BP0C0L5 1744 aa24.89■■□□□ 1.57
AGRN-208ENST00000479707 AK7Q96M32 723 aa24.88■■□□□ 1.57
AGRN-208ENST00000479707 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
AGRN-208ENST00000479707 SMIM5Q71RC9 77 aa24.87■■□□□ 1.57
AGRN-208ENST00000479707 PNISRQ8TF01 805 aaKnown RBP24.87■■□□□ 1.57
AGRN-208ENST00000479707 PNPLA7Q6ZV29 1317 aa24.86■■□□□ 1.57
AGRN-208ENST00000479707 MSH5O43196 834 aa24.86■■□□□ 1.57
AGRN-208ENST00000479707 KCNQ3O43525 872 aa24.86■■□□□ 1.57
AGRN-208ENST00000479707 ZBTB7AO95365 584 aa24.86■■□□□ 1.57
AGRN-208ENST00000479707 ZNF790Q6PG37 636 aa24.86■■□□□ 1.57
AGRN-208ENST00000479707 CASZ1Q86V15 1759 aa24.85■■□□□ 1.57
AGRN-208ENST00000479707 MIS18AQ9NYP9 233 aa24.85■■□□□ 1.57
AGRN-208ENST00000479707 TAF7Q15545 349 aaPredicted RBP24.84■■□□□ 1.57
AGRN-208ENST00000479707 DNAJC10Q8IXB1 793 aa24.84■■□□□ 1.57
AGRN-208ENST00000479707 KCPQ6ZWJ8 1503 aa24.84■■□□□ 1.57
AGRN-208ENST00000479707 ZNF831Q5JPB2 1677 aa24.83■■□□□ 1.57
AGRN-208ENST00000479707 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
AGRN-208ENST00000479707 APAF1O14727 1248 aa24.83■■□□□ 1.57
AGRN-208ENST00000479707 PHF14O94880 888 aa24.83■■□□□ 1.57
AGRN-208ENST00000479707 ATF5Q9Y2D1 282 aaPredicted RBP24.83■■□□□ 1.57
AGRN-208ENST00000479707 GNPATO15228 680 aa24.82■■□□□ 1.56
AGRN-208ENST00000479707 TJP1Q07157 1748 aa24.82■■□□□ 1.56
AGRN-208ENST00000479707 QSER1Q2KHR3 1735 aa24.82■■□□□ 1.56
AGRN-208ENST00000479707 AMIGO3Q86WK7 504 aa24.82■■□□□ 1.56
AGRN-208ENST00000479707 COL23A1Q86Y22 540 aaPredicted RBP24.82■■□□□ 1.56
AGRN-208ENST00000479707 ZNF496Q96IT1 587 aaPredicted RBP24.82■■□□□ 1.56
AGRN-208ENST00000479707 UBR2Q8IWV8 1755 aa24.82■■□□□ 1.56
AGRN-208ENST00000479707 COL5A3P25940 1745 aaPredicted RBP24.81■■□□□ 1.56
AGRN-208ENST00000479707 LMOD3Q0VAK6 560 aa24.81■■□□□ 1.56
AGRN-208ENST00000479707 FAM9BQ8IZU0 186 aa24.8■■□□□ 1.56
AGRN-208ENST00000479707 SPON1Q9HCB6 807 aa24.8■■□□□ 1.56
AGRN-208ENST00000479707 UBR3Q6ZT12 1888 aa24.8■■□□□ 1.56
AGRN-208ENST00000479707 CRKLP46109 303 aaKnown RBP24.79■■□□□ 1.56
AGRN-208ENST00000479707 FMNL2Q96PY5 1086 aa24.79■■□□□ 1.56
AGRN-208ENST00000479707 TRIM35Q9UPQ4 493 aa24.79■■□□□ 1.56
AGRN-208ENST00000479707 MYH14Q7Z406 1995 aaKnown RBP24.78■■□□□ 1.56
AGRN-208ENST00000479707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.78■■□□□ 1.56
AGRN-208ENST00000479707 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
AGRN-208ENST00000479707 VSIG10Q8N0Z9 540 aa24.78■■□□□ 1.56
AGRN-208ENST00000479707 RC3H1Q5TC82 1133 aaKnown RBP24.77■■□□□ 1.56
AGRN-208ENST00000479707 FLAD1Q8NFF5 587 aa24.77■■□□□ 1.56
AGRN-208ENST00000479707 MTFR1LQ9H019 292 aa24.77■■□□□ 1.56
AGRN-208ENST00000479707 CNTNAP4Q9C0A0 1308 aa24.77■■□□□ 1.56
AGRN-208ENST00000479707 HEG1Q9ULI3 1381 aa24.77■■□□□ 1.56
AGRN-208ENST00000479707 CYP19A1P11511 503 aaPredicted RBP24.76■■□□□ 1.55
AGRN-208ENST00000479707 RTCBQ9Y3I0 505 aaKnown RBP24.76■■□□□ 1.55
AGRN-208ENST00000479707 SSFA2P28290 1259 aa24.75■■□□□ 1.55
AGRN-208ENST00000479707 RPS6KA4O75676 772 aa24.74■■□□□ 1.55
AGRN-208ENST00000479707 INTS5Q6P9B9 1019 aaKnown RBP24.74■■□□□ 1.55
AGRN-208ENST00000479707 SLC16A10Q8TF71 515 aa24.74■■□□□ 1.55
AGRN-208ENST00000479707 LAS1LQ9Y4W2 734 aaKnown RBP24.74■■□□□ 1.55
AGRN-208ENST00000479707 LRP5O75197 1615 aa24.74■■□□□ 1.55
AGRN-208ENST00000479707 CICQ96RK0 1608 aaPredicted RBP24.74■■□□□ 1.55
AGRN-208ENST00000479707 PRAMEF22A3QJZ6 481 aa24.73■■□□□ 1.55
AGRN-208ENST00000479707 TRAPPC3LQ5T215 181 aa24.73■■□□□ 1.55
AGRN-208ENST00000479707 CCDC87Q9NVE4 849 aa24.73■■□□□ 1.55
AGRN-208ENST00000479707 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
AGRN-208ENST00000479707 MSL1Q68DK7 614 aa24.72■■□□□ 1.55
AGRN-208ENST00000479707 KDM3BQ7LBC6 1761 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms