RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 CABP4P57796 275 aa21.54■■□□□ 1.04
CYTH3-206ENST00000478541 U2SURPO15042 1029 aaKnown RBP21.52■■□□□ 1.04
CYTH3-206ENST00000478541 MRC1P22897 1456 aa21.52■■□□□ 1.03
CYTH3-206ENST00000478541 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
CYTH3-206ENST00000478541 FLAD1Q8NFF5 587 aa21.51■■□□□ 1.03
CYTH3-206ENST00000478541 COL5A3P25940 1745 aaPredicted RBP21.51■■□□□ 1.03
CYTH3-206ENST00000478541 ATP6V1AP38606 617 aa21.5■■□□□ 1.03
CYTH3-206ENST00000478541 COL23A1Q86Y22 540 aaPredicted RBP21.5■■□□□ 1.03
CYTH3-206ENST00000478541 NFATC2IPQ8NCF5 419 aa21.5■■□□□ 1.03
CYTH3-206ENST00000478541 CICQ96RK0 1608 aaPredicted RBP21.5■■□□□ 1.03
CYTH3-206ENST00000478541 ITPK1Q13572 414 aa21.49■■□□□ 1.03
CYTH3-206ENST00000478541 NUDCQ9Y266 331 aa21.49■■□□□ 1.03
CYTH3-206ENST00000478541 LINC00116Q8NCU8 138 aa21.48■■□□□ 1.03
CYTH3-206ENST00000478541 AK7Q96M32 723 aa21.48■■□□□ 1.03
CYTH3-206ENST00000478541 SLC4A9Q96Q91 983 aa21.47■■□□□ 1.03
CYTH3-206ENST00000478541 ARXQ96QS3 562 aa21.47■■□□□ 1.03
CYTH3-206ENST00000478541 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
CYTH3-206ENST00000478541 LGR6Q9HBX8 967 aa21.47■■□□□ 1.03
CYTH3-206ENST00000478541 RNMTO43148 476 aaKnown RBP21.46■■□□□ 1.03
CYTH3-206ENST00000478541 MAP3K5Q99683 1374 aa21.46■■□□□ 1.03
CYTH3-206ENST00000478541 SSFA2P28290 1259 aa21.45■■□□□ 1.02
CYTH3-206ENST00000478541 POLD1P28340 1107 aa21.45■■□□□ 1.02
CYTH3-206ENST00000478541 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
CYTH3-206ENST00000478541 RBM42Q9BTD8 480 aaKnown RBP21.45■■□□□ 1.02
CYTH3-206ENST00000478541 RSPH6AQ9H0K4 717 aa21.45■■□□□ 1.02
CYTH3-206ENST00000478541 MSH5O43196 834 aa21.44■■□□□ 1.02
CYTH3-206ENST00000478541 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
CYTH3-206ENST00000478541 TJP1Q07157 1748 aa21.43■■□□□ 1.02
CYTH3-206ENST00000478541 AMIGO3Q86WK7 504 aa21.43■■□□□ 1.02
CYTH3-206ENST00000478541 SYT17Q9BSW7 474 aa21.43■■□□□ 1.02
CYTH3-206ENST00000478541 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
CYTH3-206ENST00000478541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.42■■□□□ 1.02
CYTH3-206ENST00000478541 FCHSD2O94868 740 aa21.42■■□□□ 1.02
CYTH3-206ENST00000478541 PRKAR2BP31323 418 aa21.42■■□□□ 1.02
CYTH3-206ENST00000478541 RC3H1Q5TC82 1133 aaKnown RBP21.42■■□□□ 1.02
CYTH3-206ENST00000478541 UBR2Q8IWV8 1755 aa21.41■■□□□ 1.02
CYTH3-206ENST00000478541 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
CYTH3-206ENST00000478541 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
CYTH3-206ENST00000478541 U2AF1L5P0DN76 240 aaPredicted RBP21.41■■□□□ 1.02
CYTH3-206ENST00000478541 ZEB1P37275 1124 aaPredicted RBP21.41■■□□□ 1.02
CYTH3-206ENST00000478541 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.02
CYTH3-206ENST00000478541 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
CYTH3-206ENST00000478541 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
CYTH3-206ENST00000478541 GNPATO15228 680 aa21.4■■□□□ 1.02
CYTH3-206ENST00000478541 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
CYTH3-206ENST00000478541 RALBP1Q15311 655 aa21.4■■□□□ 1.02
CYTH3-206ENST00000478541 PHACTR3Q96KR7 559 aa21.4■■□□□ 1.02
CYTH3-206ENST00000478541 PHF14O94880 888 aa21.39■■□□□ 1.01
CYTH3-206ENST00000478541 KCPQ6ZWJ8 1503 aa21.39■■□□□ 1.01
CYTH3-206ENST00000478541 CEMIPQ8WUJ3 1361 aa21.37■■□□□ 1.01
CYTH3-206ENST00000478541 IL17REQ8NFR9 667 aa21.37■■□□□ 1.01
CYTH3-206ENST00000478541 RTCBQ9Y3I0 505 aaKnown RBP21.37■■□□□ 1.01
CYTH3-206ENST00000478541 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
CYTH3-206ENST00000478541 ADRA2BP18089 450 aa21.36■■□□□ 1.01
CYTH3-206ENST00000478541 MSL1Q68DK7 614 aa21.36■■□□□ 1.01
CYTH3-206ENST00000478541 SMIM5Q71RC9 77 aa21.36■■□□□ 1.01
CYTH3-206ENST00000478541 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
CYTH3-206ENST00000478541 RPS6KA4O75676 772 aa21.35■■□□□ 1.01
CYTH3-206ENST00000478541 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
CYTH3-206ENST00000478541 TEFQ10587 303 aa21.34■■□□□ 1.01
CYTH3-206ENST00000478541 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
CYTH3-206ENST00000478541 CRKLP46109 303 aaKnown RBP21.33■■□□□ 1.01
CYTH3-206ENST00000478541 VSIG10Q8N0Z9 540 aa21.33■■□□□ 1.01
CYTH3-206ENST00000478541 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
CYTH3-206ENST00000478541 ARHGEF1Q92888 912 aaKnown RBP21.31■■□□□ 1
CYTH3-206ENST00000478541 MYBBP1AQ9BQG0 1328 aaKnown RBP21.3■■□□□ 1
CYTH3-206ENST00000478541 HTATSF1O43719 755 aaKnown RBP21.3■■□□□ 1
CYTH3-206ENST00000478541 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
CYTH3-206ENST00000478541 TTC5Q8N0Z6 440 aa21.3■■□□□ 1
CYTH3-206ENST00000478541 INTS5Q6P9B9 1019 aaKnown RBP21.29■■□□□ 1
CYTH3-206ENST00000478541 ZNF790Q6PG37 636 aa21.29■■□□□ 1
CYTH3-206ENST00000478541 KLHL34Q8N239 644 aa21.29■■□□□ 1
CYTH3-206ENST00000478541 PLEKHF1Q96S99 279 aa21.29■■□□□ 1
CYTH3-206ENST00000478541 NEFMP07197 916 aa21.28■■□□□ 1
CYTH3-206ENST00000478541 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
CYTH3-206ENST00000478541 RTF1Q92541 710 aaKnown RBP21.28■■□□□ 1
CYTH3-206ENST00000478541 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
CYTH3-206ENST00000478541 CD2APQ9Y5K6 639 aa21.28■■□□□ 1
CYTH3-206ENST00000478541 UTRNP46939 3433 aa21.28■■□□□ 1
CYTH3-206ENST00000478541 RFC4P35249 363 aa21.27■■□□□ 1
CYTH3-206ENST00000478541 NLGN1Q8N2Q7 840 aa21.27■■□□□ 1
CYTH3-206ENST00000478541 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
CYTH3-206ENST00000478541 HEG1Q9ULI3 1381 aa21.26■□□□□ 0.99
CYTH3-206ENST00000478541 NLGN2Q8NFZ4 835 aa21.26■□□□□ 0.99
CYTH3-206ENST00000478541 BTBD11A6QL63 1104 aa21.25■□□□□ 0.99
CYTH3-206ENST00000478541 GYS1P13807 737 aa21.25■□□□□ 0.99
CYTH3-206ENST00000478541 MCM10Q7L590 875 aa21.25■□□□□ 0.99
CYTH3-206ENST00000478541 ZNF496Q96IT1 587 aaPredicted RBP21.25■□□□□ 0.99
CYTH3-206ENST00000478541 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
CYTH3-206ENST00000478541 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
CYTH3-206ENST00000478541 SOS1Q07889 1333 aaPredicted RBP21.24■□□□□ 0.99
CYTH3-206ENST00000478541 USP42Q9H9J4 1324 aaKnown RBP21.24■□□□□ 0.99
CYTH3-206ENST00000478541 MMP10P09238 476 aa21.23■□□□□ 0.99
CYTH3-206ENST00000478541 FMNL2Q96PY5 1086 aa21.23■□□□□ 0.99
CYTH3-206ENST00000478541 PRKRIP1Q9H875 184 aaPredicted RBP21.23■□□□□ 0.99
CYTH3-206ENST00000478541 CHD4Q14839 1912 aa21.23■□□□□ 0.99
CYTH3-206ENST00000478541 STARD3NLO95772 234 aa21.22■□□□□ 0.99
CYTH3-206ENST00000478541 GOLGB1Q14789 3259 aaKnown RBP21.21■□□□□ 0.99
CYTH3-206ENST00000478541 DCTN1Q14203 1278 aa21.21■□□□□ 0.99
CYTH3-206ENST00000478541 NFE2L2Q16236 605 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms