RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 USP17L21D6R901 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 WASLO00401 505 aaPredicted RBP7.8□□□□□ -1.16
CCNL1-220ENST00000478454 RNF144AP50876 292 aaPredicted RBP7.8□□□□□ -1.16
CCNL1-220ENST00000478454 ATP1A2P50993 1020 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 CENPCQ03188 943 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 PBXIP1Q96AQ6 731 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 FHDC1Q9C0D6 1143 aaPredicted RBP7.8□□□□□ -1.16
CCNL1-220ENST00000478454 ZMIZ1Q9ULJ6 1067 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 SFI1A8K8P3 1242 aa7.79□□□□□ -1.16
CCNL1-220ENST00000478454 C11orf95C9JLR9 678 aaPredicted RBP7.79□□□□□ -1.16
CCNL1-220ENST00000478454 DPYDQ12882 1025 aa7.79□□□□□ -1.16
CCNL1-220ENST00000478454 LARP1Q6PKG0 1096 aaKnown RBP7.79□□□□□ -1.16
CCNL1-220ENST00000478454 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
CCNL1-220ENST00000478454 SENP2Q9HC62 589 aa7.79□□□□□ -1.16
CCNL1-220ENST00000478454 ESCO1Q5FWF5 840 aa7.78□□□□□ -1.16
CCNL1-220ENST00000478454 ANKMY2Q8IV38 441 aa7.78□□□□□ -1.16
CCNL1-220ENST00000478454 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
CCNL1-220ENST00000478454 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
CCNL1-220ENST00000478454 USP3Q9Y6I4 520 aa7.78□□□□□ -1.16
CCNL1-220ENST00000478454 LGR5O75473 907 aa7.77□□□□□ -1.17
CCNL1-220ENST00000478454 ATG7O95352 703 aa7.77□□□□□ -1.17
CCNL1-220ENST00000478454 EPHA4P54764 986 aa7.77□□□□□ -1.17
CCNL1-220ENST00000478454 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
CCNL1-220ENST00000478454 TNS4Q8IZW8 715 aa7.77□□□□□ -1.17
CCNL1-220ENST00000478454 TSEN2Q8NCE0 465 aaKnown RBP7.77□□□□□ -1.17
CCNL1-220ENST00000478454 KIFC2Q96AC6 838 aa7.77□□□□□ -1.17
CCNL1-220ENST00000478454 MAN1A2O60476 641 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 GPC1P35052 558 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 SMTNP53814 917 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 TLR1Q15399 786 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 STK32AQ8WU08 396 aa7.76□□□□□ -1.17
CCNL1-220ENST00000478454 NOVA2Q9UNW9 492 aaKnown RBP7.76□□□□□ -1.17
CCNL1-220ENST00000478454 IQSEC3Q9UPP2 1182 aaPredicted RBP7.76□□□□□ -1.17
CCNL1-220ENST00000478454 MTFR1Q15390 333 aa7.75□□□□□ -1.17
CCNL1-220ENST00000478454 A6NJY4 79 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 RHOQP17081 205 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 SEC13P55735 322 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 FOXK2Q01167 660 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 FAM69CQ0P6D2 419 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 POU4F2Q12837 409 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 ELOAQ14241 798 aaKnown RBP7.74□□□□□ -1.17
CCNL1-220ENST00000478454 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 TBCELQ5QJ74 424 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 LYSMD3Q7Z3D4 306 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 GAS2L2Q8NHY3 880 aa7.74□□□□□ -1.17
CCNL1-220ENST00000478454 SENP3-EIF4A1A0A087X0R7 540 aa7.73□□□□□ -1.17
CCNL1-220ENST00000478454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.172e-6■■■□□ 17.1
CCNL1-220ENST00000478454 TMEM164Q5U3C3 297 aa7.73□□□□□ -1.17
CCNL1-220ENST00000478454 PPARGC1BQ86YN6 1023 aaKnown RBP7.73□□□□□ -1.17
CCNL1-220ENST00000478454 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
CCNL1-220ENST00000478454 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
CCNL1-220ENST00000478454 SCHIP1Q9P0W5 487 aaPredicted RBP7.73□□□□□ -1.17
CCNL1-220ENST00000478454 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
CCNL1-220ENST00000478454 M0R2N6 131 aa7.72□□□□□ -1.17
CCNL1-220ENST00000478454 BACH1O14867 736 aa7.72□□□□□ -1.17
CCNL1-220ENST00000478454 C21orf2O43822 256 aa7.72□□□□□ -1.17
CCNL1-220ENST00000478454 PPP1R15AO75807 674 aaPredicted RBP7.72□□□□□ -1.17
CCNL1-220ENST00000478454 TSPAN10Q9H1Z9 355 aaPredicted RBP7.72□□□□□ -1.17
CCNL1-220ENST00000478454 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
CCNL1-220ENST00000478454 SPATA31C2B4DYI2 1134 aa7.71□□□□□ -1.18
CCNL1-220ENST00000478454 CDK2AP1O14519 115 aa7.71□□□□□ -1.18
CCNL1-220ENST00000478454 PHKA2P46019 1235 aa7.71□□□□□ -1.18
CCNL1-220ENST00000478454 PTSQ03393 145 aa7.71□□□□□ -1.18
CCNL1-220ENST00000478454 C4orf17Q53FE4 359 aa7.71□□□□□ -1.18
CCNL1-220ENST00000478454 NBPF10Q6P3W6 841 aaKnown RBP7.71□□□□□ -1.18
CCNL1-220ENST00000478454 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
CCNL1-220ENST00000478454 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
CCNL1-220ENST00000478454 SLC9A9Q8IVB4 645 aa7.7□□□□□ -1.18
CCNL1-220ENST00000478454 ZDHHC1Q8WTX9 485 aa7.7□□□□□ -1.18
CCNL1-220ENST00000478454 TMEM88BA6NKF7 163 aa7.69□□□□□ -1.18
CCNL1-220ENST00000478454 SH3PXD2AQ5TCZ1 1133 aa7.69□□□□□ -1.18
CCNL1-220ENST00000478454 RHBDD1Q8TEB9 315 aa7.69□□□□□ -1.18
CCNL1-220ENST00000478454 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
CCNL1-220ENST00000478454 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
CCNL1-220ENST00000478454 PARP3Q9Y6F1 533 aa7.69□□□□□ -1.18
CCNL1-220ENST00000478454 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
CCNL1-220ENST00000478454 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
CCNL1-220ENST00000478454 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
CCNL1-220ENST00000478454 WEE1P30291 646 aa7.67□□□□□ -1.18
CCNL1-220ENST00000478454 VEGFBP49765 207 aa7.67□□□□□ -1.18
CCNL1-220ENST00000478454 WDR44Q5JSH3 913 aa7.67□□□□□ -1.18
CCNL1-220ENST00000478454 SCG3Q8WXD2 468 aaKnown RBP7.67□□□□□ -1.18
CCNL1-220ENST00000478454 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
CCNL1-220ENST00000478454 PLA2G4AP47712 749 aa7.66□□□□□ -1.18
CCNL1-220ENST00000478454 OCLNQ16625 522 aa7.66□□□□□ -1.18
CCNL1-220ENST00000478454 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
CCNL1-220ENST00000478454 CCDC155Q8N6L0 562 aa7.66□□□□□ -1.18
CCNL1-220ENST00000478454 NIFKQ9BYG3 293 aaKnown RBP7.66□□□□□ -1.18
CCNL1-220ENST00000478454 CUEDC1Q9NWM3 386 aaPredicted RBP7.66□□□□□ -1.18
CCNL1-220ENST00000478454 CABP1Q9NZU7 370 aa7.66□□□□□ -1.18
CCNL1-220ENST00000478454 ATAD2Q6PL18 1390 aa7.66□□□□□ -1.18
CCNL1-220ENST00000478454 PRMT3O60678 531 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms