RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 ATG3Q9NT62 314 aa17.83■□□□□ 0.44
ABCF3-212ENST00000478288 ITPK1Q13572 414 aa17.82■□□□□ 0.44
ABCF3-212ENST00000478288 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
ABCF3-212ENST00000478288 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
ABCF3-212ENST00000478288 ATP6V1AP38606 617 aa17.81■□□□□ 0.44
ABCF3-212ENST00000478288 C1QTNF8P60827 252 aa17.81■□□□□ 0.44
ABCF3-212ENST00000478288 AMOTQ4VCS5 1084 aa17.81■□□□□ 0.44
ABCF3-212ENST00000478288 PHF14O94880 888 aa17.8■□□□□ 0.44
ABCF3-212ENST00000478288 PLEKHO1Q53GL0 409 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-212ENST00000478288 KDM6AO15550 1401 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-212ENST00000478288 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-212ENST00000478288 GNPATO15228 680 aa17.79■□□□□ 0.44
ABCF3-212ENST00000478288 MORC1Q86VD1 984 aa17.78■□□□□ 0.44
ABCF3-212ENST00000478288 MYH14Q7Z406 1995 aaKnown RBP17.78■□□□□ 0.44
ABCF3-212ENST00000478288 SCN11AQ9UI33 1791 aa17.77■□□□□ 0.44
ABCF3-212ENST00000478288 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-212ENST00000478288 ADRA2BP18089 450 aa17.77■□□□□ 0.44
ABCF3-212ENST00000478288 RC3H1Q5TC82 1133 aaKnown RBP17.77■□□□□ 0.44
ABCF3-212ENST00000478288 ADCY9O60503 1353 aa17.77■□□□□ 0.43
ABCF3-212ENST00000478288 CNTNAP4Q9C0A0 1308 aa17.76■□□□□ 0.43
ABCF3-212ENST00000478288 ZNF530Q6P9A1 599 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-212ENST00000478288 KNSTRNQ9Y448 316 aa17.76■□□□□ 0.43
ABCF3-212ENST00000478288 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
ABCF3-212ENST00000478288 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
ABCF3-212ENST00000478288 RTCBQ9Y3I0 505 aaKnown RBP17.75■□□□□ 0.43
ABCF3-212ENST00000478288 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
ABCF3-212ENST00000478288 KIAA1551Q9HCM1 1747 aa17.75■□□□□ 0.43
ABCF3-212ENST00000478288 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-212ENST00000478288 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
ABCF3-212ENST00000478288 ATP10DQ9P241 1426 aa17.73■□□□□ 0.43
ABCF3-212ENST00000478288 CABP4P57796 275 aa17.73■□□□□ 0.43
ABCF3-212ENST00000478288 C1orf141Q5JVX7 400 aa17.73■□□□□ 0.43
ABCF3-212ENST00000478288 TRAPPC3LQ5T215 181 aa17.73■□□□□ 0.43
ABCF3-212ENST00000478288 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
ABCF3-212ENST00000478288 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
ABCF3-212ENST00000478288 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
ABCF3-212ENST00000478288 SENP3-EIF4A1A0A087X0R7 540 aa17.72■□□□□ 0.43
ABCF3-212ENST00000478288 MMP10P09238 476 aa17.72■□□□□ 0.43
ABCF3-212ENST00000478288 IL13P35225 146 aa17.72■□□□□ 0.43
ABCF3-212ENST00000478288 MTHFSP49914 203 aa17.72■□□□□ 0.43
ABCF3-212ENST00000478288 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
ABCF3-212ENST00000478288 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
ABCF3-212ENST00000478288 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.43
ABCF3-212ENST00000478288 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
ABCF3-212ENST00000478288 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
ABCF3-212ENST00000478288 TJP1Q07157 1748 aa17.71■□□□□ 0.43
ABCF3-212ENST00000478288 MRC1P22897 1456 aa17.7■□□□□ 0.42
ABCF3-212ENST00000478288 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
ABCF3-212ENST00000478288 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
ABCF3-212ENST00000478288 ADAMTS7Q9UKP4 1686 aa17.69■□□□□ 0.42
ABCF3-212ENST00000478288 TGFB2P61812 414 aa17.69■□□□□ 0.42
ABCF3-212ENST00000478288 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
ABCF3-212ENST00000478288 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-212ENST00000478288 GYS1P13807 737 aa17.68■□□□□ 0.42
ABCF3-212ENST00000478288 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
ABCF3-212ENST00000478288 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
ABCF3-212ENST00000478288 RFC4P35249 363 aa17.67■□□□□ 0.42
ABCF3-212ENST00000478288 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
ABCF3-212ENST00000478288 GPBP1L1Q9HC44 474 aaPredicted RBP17.66■□□□□ 0.42
ABCF3-212ENST00000478288 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-212ENST00000478288 CRKLP46109 303 aaKnown RBP17.65■□□□□ 0.42
ABCF3-212ENST00000478288 CCDC87Q9NVE4 849 aa17.65■□□□□ 0.42
ABCF3-212ENST00000478288 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
ABCF3-212ENST00000478288 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
ABCF3-212ENST00000478288 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
ABCF3-212ENST00000478288 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
ABCF3-212ENST00000478288 PARP3Q9Y6F1 533 aa17.63■□□□□ 0.41
ABCF3-212ENST00000478288 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
ABCF3-212ENST00000478288 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
ABCF3-212ENST00000478288 INTS5Q6P9B9 1019 aaKnown RBP17.6■□□□□ 0.41
ABCF3-212ENST00000478288 WWC3Q9ULE0 1092 aa17.6■□□□□ 0.41
ABCF3-212ENST00000478288 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-212ENST00000478288 A0A0G2JLW4 131 aa17.59■□□□□ 0.41
ABCF3-212ENST00000478288 RNMTO43148 476 aaKnown RBP17.59■□□□□ 0.41
ABCF3-212ENST00000478288 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
ABCF3-212ENST00000478288 SOS1Q07889 1333 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-212ENST00000478288 HMOX1P09601 288 aa17.58■□□□□ 0.4
ABCF3-212ENST00000478288 DPEP1P16444 411 aa17.58■□□□□ 0.4
ABCF3-212ENST00000478288 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
ABCF3-212ENST00000478288 LGR6Q9HBX8 967 aa17.58■□□□□ 0.4
ABCF3-212ENST00000478288 BCS1LQ9Y276 419 aa17.58■□□□□ 0.4
ABCF3-212ENST00000478288 KCNA3P22001 575 aa17.57■□□□□ 0.4
ABCF3-212ENST00000478288 FKBP8Q14318 412 aa17.57■□□□□ 0.4
ABCF3-212ENST00000478288 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
ABCF3-212ENST00000478288 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
ABCF3-212ENST00000478288 AFDNP55196 1824 aaKnown RBP17.56■□□□□ 0.4
ABCF3-212ENST00000478288 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-212ENST00000478288 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-212ENST00000478288 DDR1Q08345 913 aa17.56■□□□□ 0.4
ABCF3-212ENST00000478288 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
ABCF3-212ENST00000478288 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
ABCF3-212ENST00000478288 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
ABCF3-212ENST00000478288 ZPR1O75312 459 aa17.55■□□□□ 0.4
ABCF3-212ENST00000478288 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
ABCF3-212ENST00000478288 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-212ENST00000478288 COL15A1P39059 1388 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 KIF3CO14782 793 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 FCHSD2O94868 740 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 HSPA6P17066 643 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms