RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
TOP3A-205ENST00000477508 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
TOP3A-205ENST00000477508 TEFQ10587 303 aa17.32■□□□□ 0.36
TOP3A-205ENST00000477508 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
TOP3A-205ENST00000477508 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
TOP3A-205ENST00000477508 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
TOP3A-205ENST00000477508 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
TOP3A-205ENST00000477508 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
TOP3A-205ENST00000477508 CEMIPQ8WUJ3 1361 aa17.3■□□□□ 0.36
TOP3A-205ENST00000477508 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
TOP3A-205ENST00000477508 MRC1P22897 1456 aa17.3■□□□□ 0.36
TOP3A-205ENST00000477508 PALLDQ8WX93 1383 aa17.29■□□□□ 0.36
TOP3A-205ENST00000477508 VIRMAQ69YN4 1812 aaKnown RBP17.29■□□□□ 0.36
TOP3A-205ENST00000477508 NBPF14Q5TI25 921 aa17.29■□□□□ 0.36
TOP3A-205ENST00000477508 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
TOP3A-205ENST00000477508 PROM2Q8N271 834 aa17.29■□□□□ 0.36
TOP3A-205ENST00000477508 RIPK4P57078 832 aa17.28■□□□□ 0.36
TOP3A-205ENST00000477508 ATG3Q9NT62 314 aa17.28■□□□□ 0.36
TOP3A-205ENST00000477508 ASAP1Q9ULH1 1129 aa17.28■□□□□ 0.36
TOP3A-205ENST00000477508 RREB1Q92766 1687 aa17.28■□□□□ 0.36
TOP3A-205ENST00000477508 LY75O60449 1722 aa17.27■□□□□ 0.36
TOP3A-205ENST00000477508 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-205ENST00000477508 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
TOP3A-205ENST00000477508 MCM10Q7L590 875 aa17.26■□□□□ 0.35
TOP3A-205ENST00000477508 LOC102724428A0A0B4J2F2 783 aa17.25■□□□□ 0.35
TOP3A-205ENST00000477508 SIK1P57059 783 aa17.25■□□□□ 0.35
TOP3A-205ENST00000477508 APAF1O14727 1248 aa17.24■□□□□ 0.35
TOP3A-205ENST00000477508 TAF7Q15545 349 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-205ENST00000477508 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
TOP3A-205ENST00000477508 NUP188Q5SRE5 1749 aa17.24■□□□□ 0.35
TOP3A-205ENST00000477508 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
TOP3A-205ENST00000477508 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
TOP3A-205ENST00000477508 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
TOP3A-205ENST00000477508 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
TOP3A-205ENST00000477508 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
TOP3A-205ENST00000477508 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
TOP3A-205ENST00000477508 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
TOP3A-205ENST00000477508 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
TOP3A-205ENST00000477508 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-205ENST00000477508 ZNF831Q5JPB2 1677 aa17.21■□□□□ 0.35
TOP3A-205ENST00000477508 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
TOP3A-205ENST00000477508 ATP6V1AP38606 617 aa17.21■□□□□ 0.35
TOP3A-205ENST00000477508 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.35
TOP3A-205ENST00000477508 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
TOP3A-205ENST00000477508 MIER1Q8N108 512 aa17.21■□□□□ 0.35
TOP3A-205ENST00000477508 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
TOP3A-205ENST00000477508 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
TOP3A-205ENST00000477508 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
TOP3A-205ENST00000477508 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
TOP3A-205ENST00000477508 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
TOP3A-205ENST00000477508 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
TOP3A-205ENST00000477508 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
TOP3A-205ENST00000477508 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
TOP3A-205ENST00000477508 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
TOP3A-205ENST00000477508 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
TOP3A-205ENST00000477508 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
TOP3A-205ENST00000477508 KCNQ4P56696 695 aa17.17■□□□□ 0.34
TOP3A-205ENST00000477508 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
TOP3A-205ENST00000477508 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
TOP3A-205ENST00000477508 C5P01031 1676 aa17.16■□□□□ 0.34
TOP3A-205ENST00000477508 ITPK1Q13572 414 aa17.16■□□□□ 0.34
TOP3A-205ENST00000477508 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
TOP3A-205ENST00000477508 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
TOP3A-205ENST00000477508 SLC4A9Q96Q91 983 aa17.16■□□□□ 0.34
TOP3A-205ENST00000477508 ANO8Q9HCE9 1232 aaPredicted RBP17.16■□□□□ 0.34
TOP3A-205ENST00000477508 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
TOP3A-205ENST00000477508 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
TOP3A-205ENST00000477508 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
TOP3A-205ENST00000477508 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
TOP3A-205ENST00000477508 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
TOP3A-205ENST00000477508 AK7Q96M32 723 aa17.15■□□□□ 0.34
TOP3A-205ENST00000477508 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
TOP3A-205ENST00000477508 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
TOP3A-205ENST00000477508 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
TOP3A-205ENST00000477508 STARD3NLO95772 234 aa17.14■□□□□ 0.33
TOP3A-205ENST00000477508 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
TOP3A-205ENST00000477508 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
TOP3A-205ENST00000477508 CNTNAP4Q9C0A0 1308 aa17.14■□□□□ 0.33
TOP3A-205ENST00000477508 CHL1O00533 1208 aa17.13■□□□□ 0.33
TOP3A-205ENST00000477508 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
TOP3A-205ENST00000477508 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
TOP3A-205ENST00000477508 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
TOP3A-205ENST00000477508 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-205ENST00000477508 KCNQ3O43525 872 aa17.12■□□□□ 0.33
TOP3A-205ENST00000477508 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
TOP3A-205ENST00000477508 GNAI1P63096 354 aa17.12■□□□□ 0.33
TOP3A-205ENST00000477508 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
TOP3A-205ENST00000477508 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
TOP3A-205ENST00000477508 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
TOP3A-205ENST00000477508 KDM3BQ7LBC6 1761 aa17.11■□□□□ 0.33
TOP3A-205ENST00000477508 DNAJC10Q8IXB1 793 aa17.11■□□□□ 0.33
TOP3A-205ENST00000477508 IL16Q14005 1332 aa17.11■□□□□ 0.33
TOP3A-205ENST00000477508 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
TOP3A-205ENST00000477508 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
TOP3A-205ENST00000477508 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
TOP3A-205ENST00000477508 SSFA2P28290 1259 aa17.1■□□□□ 0.33
TOP3A-205ENST00000477508 CRKLP46109 303 aaKnown RBP17.1■□□□□ 0.33
TOP3A-205ENST00000477508 EIF4A1P60842 406 aaKnown RBP17.1■□□□□ 0.33
TOP3A-205ENST00000477508 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
TOP3A-205ENST00000477508 SLC16A10Q8TF71 515 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms