RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
SMG5-204ENST00000476954 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
SMG5-204ENST00000476954 SIK1P57059 783 aa21.88■■□□□ 1.09
SMG5-204ENST00000476954 RRS1Q15050 365 aaKnown RBP21.88■■□□□ 1.09
SMG5-204ENST00000476954 COG3Q96JB2 828 aa21.88■■□□□ 1.09
SMG5-204ENST00000476954 SBF1O95248 1867 aa21.88■■□□□ 1.09
SMG5-204ENST00000476954 C4AP0C0L4 1744 aa21.87■■□□□ 1.09
SMG5-204ENST00000476954 KCNA3P22001 575 aa21.87■■□□□ 1.09
SMG5-204ENST00000476954 RNF181Q9P0P0 153 aa21.87■■□□□ 1.09
SMG5-204ENST00000476954 SMC1BQ8NDV3 1235 aa21.86■■□□□ 1.09
SMG5-204ENST00000476954 RTL1A6NKG5 1358 aa21.84■■□□□ 1.09
SMG5-204ENST00000476954 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.09
SMG5-204ENST00000476954 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
SMG5-204ENST00000476954 CCDC87Q9NVE4 849 aa21.82■■□□□ 1.08
SMG5-204ENST00000476954 TMF1P82094 1093 aa21.81■■□□□ 1.08
SMG5-204ENST00000476954 DCAF5Q96JK2 942 aa21.81■■□□□ 1.08
SMG5-204ENST00000476954 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
SMG5-204ENST00000476954 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
SMG5-204ENST00000476954 SIN3AQ96ST3 1273 aa21.8■■□□□ 1.08
SMG5-204ENST00000476954 SMG6Q86US8 1419 aaKnown RBP21.8■■□□□ 1.08
SMG5-204ENST00000476954 TRAPPC3LQ5T215 181 aa21.78■■□□□ 1.08
SMG5-204ENST00000476954 PIM2Q9P1W9 311 aa21.78■■□□□ 1.08
SMG5-204ENST00000476954 GYS1P13807 737 aa21.77■■□□□ 1.08
SMG5-204ENST00000476954 ARHGEF1Q92888 912 aaKnown RBP21.77■■□□□ 1.08
SMG5-204ENST00000476954 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
SMG5-204ENST00000476954 DALRD3Q5D0E6 543 aaKnown RBP21.76■■□□□ 1.07
SMG5-204ENST00000476954 TMOD3Q9NYL9 352 aa21.76■■□□□ 1.07
SMG5-204ENST00000476954 RTCBQ9Y3I0 505 aaKnown RBP21.76■■□□□ 1.07
SMG5-204ENST00000476954 PARP3Q9Y6F1 533 aa21.76■■□□□ 1.07
SMG5-204ENST00000476954 CHRNA5P30532 468 aa21.75■■□□□ 1.07
SMG5-204ENST00000476954 SLC4A9Q96Q91 983 aa21.75■■□□□ 1.07
SMG5-204ENST00000476954 ATG3Q9NT62 314 aa21.75■■□□□ 1.07
SMG5-204ENST00000476954 INSRP06213 1382 aa21.74■■□□□ 1.07
SMG5-204ENST00000476954 RASSF7Q02833 373 aa21.74■■□□□ 1.07
SMG5-204ENST00000476954 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
SMG5-204ENST00000476954 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
SMG5-204ENST00000476954 MYH14Q7Z406 1995 aaKnown RBP21.73■■□□□ 1.07
SMG5-204ENST00000476954 KDRP35968 1356 aa21.73■■□□□ 1.07
SMG5-204ENST00000476954 CARD11Q9BXL7 1154 aa21.72■■□□□ 1.07
SMG5-204ENST00000476954 CCDC88AQ3V6T2 1871 aa21.71■■□□□ 1.07
SMG5-204ENST00000476954 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
SMG5-204ENST00000476954 FYB1O15117 783 aa21.7■■□□□ 1.06
SMG5-204ENST00000476954 FOXN1O15353 648 aa21.7■■□□□ 1.06
SMG5-204ENST00000476954 VEGFAP15692 232 aaPredicted RBP21.7■■□□□ 1.06
SMG5-204ENST00000476954 DDR1Q08345 913 aa21.7■■□□□ 1.06
SMG5-204ENST00000476954 MKRN1Q9UHC7 482 aaKnown RBP21.7■■□□□ 1.06
SMG5-204ENST00000476954 TIAM2Q8IVF5 1701 aa21.69■■□□□ 1.06
SMG5-204ENST00000476954 RFC4P35249 363 aa21.69■■□□□ 1.06
SMG5-204ENST00000476954 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
SMG5-204ENST00000476954 SRP68Q9UHB9 627 aaKnown RBP21.68■■□□□ 1.06
SMG5-204ENST00000476954 FLT4P35916 1363 aa21.68■■□□□ 1.06
SMG5-204ENST00000476954 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
SMG5-204ENST00000476954 GLTPD2A6NH11 291 aa21.67■■□□□ 1.06
SMG5-204ENST00000476954 ADRA2BP18089 450 aa21.67■■□□□ 1.06
SMG5-204ENST00000476954 RBM42Q9BTD8 480 aaKnown RBP21.67■■□□□ 1.06
SMG5-204ENST00000476954 SPG7Q9UQ90 795 aa21.67■■□□□ 1.06
SMG5-204ENST00000476954 NCAPD2Q15021 1401 aa21.66■■□□□ 1.06
SMG5-204ENST00000476954 POTECB2RU33 542 aa21.66■■□□□ 1.06
SMG5-204ENST00000476954 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
SMG5-204ENST00000476954 FKBP8Q14318 412 aa21.66■■□□□ 1.06
SMG5-204ENST00000476954 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
SMG5-204ENST00000476954 FAM161AQ3B820 660 aa21.65■■□□□ 1.06
SMG5-204ENST00000476954 RC3H1Q5TC82 1133 aaKnown RBP21.65■■□□□ 1.06
SMG5-204ENST00000476954 CNTNAP4Q9C0A0 1308 aa21.64■■□□□ 1.05
SMG5-204ENST00000476954 PHKG2P15735 406 aa21.64■■□□□ 1.05
SMG5-204ENST00000476954 EMILIN1Q9Y6C2 1016 aa21.64■■□□□ 1.05
SMG5-204ENST00000476954 KIF20BQ96Q89 1820 aa21.64■■□□□ 1.05
SMG5-204ENST00000476954 ZC3H4Q9UPT8 1303 aaKnown RBP21.63■■□□□ 1.05
SMG5-204ENST00000476954 LMNB1P20700 586 aa21.62■■□□□ 1.05
SMG5-204ENST00000476954 IFNL2Q8IZJ0 200 aa21.61■■□□□ 1.05
SMG5-204ENST00000476954 TESK2Q96S53 571 aa21.61■■□□□ 1.05
SMG5-204ENST00000476954 PRDM10Q9NQV6 1147 aa21.61■■□□□ 1.05
SMG5-204ENST00000476954 CREBZFQ9NS37 354 aa21.59■■□□□ 1.05
SMG5-204ENST00000476954 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
SMG5-204ENST00000476954 KIF24Q5T7B8 1368 aa21.59■■□□□ 1.05
SMG5-204ENST00000476954 USP42Q9H9J4 1324 aaKnown RBP21.58■■□□□ 1.05
SMG5-204ENST00000476954 POLRMTO00411 1230 aaKnown RBP21.58■■□□□ 1.05
SMG5-204ENST00000476954 POTEIP0CG38 1075 aa21.58■■□□□ 1.05
SMG5-204ENST00000476954 POTEJP0CG39 1038 aa21.58■■□□□ 1.05
SMG5-204ENST00000476954 EYA1Q99502 592 aa21.58■■□□□ 1.05
SMG5-204ENST00000476954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.58■■□□□ 1.052e-14■□□□□ 11
SMG5-204ENST00000476954 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
SMG5-204ENST00000476954 ADAMTS7Q9UKP4 1686 aa21.57■■□□□ 1.04
SMG5-204ENST00000476954 DLEC1Q9Y238 1755 aa21.57■■□□□ 1.04
SMG5-204ENST00000476954 NFKBIEO00221 500 aa21.56■■□□□ 1.04
SMG5-204ENST00000476954 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
SMG5-204ENST00000476954 TM4SF1P30408 202 aa21.55■■□□□ 1.04
SMG5-204ENST00000476954 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
SMG5-204ENST00000476954 CTCFP49711 727 aaPredicted RBP21.55■■□□□ 1.04
SMG5-204ENST00000476954 LBX1P52954 281 aa21.55■■□□□ 1.04
SMG5-204ENST00000476954 ABHD8Q96I13 439 aa21.55■■□□□ 1.04
SMG5-204ENST00000476954 CNTNAP1P78357 1384 aa21.55■■□□□ 1.04
SMG5-204ENST00000476954 ST20-MTHFSA0A0A6YYL1 179 aa21.54■■□□□ 1.04
SMG5-204ENST00000476954 CHADLQ6NUI6 762 aa21.54■■□□□ 1.04
SMG5-204ENST00000476954 PCDH10Q9P2E7 1040 aa21.54■■□□□ 1.04
SMG5-204ENST00000476954 TJP1Q07157 1748 aa21.54■■□□□ 1.04
SMG5-204ENST00000476954 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
SMG5-204ENST00000476954 VIRMAQ69YN4 1812 aaKnown RBP21.53■■□□□ 1.04
SMG5-204ENST00000476954 PTCD1O75127 700 aaKnown RBP21.52■■□□□ 1.04
SMG5-204ENST00000476954 AIDAQ96BJ3 306 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms