RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 TRIM35Q9UPQ4 493 aa20.89■□□□□ 0.93
PSMD4-211ENST00000476855 TNS2Q63HR2 1409 aa20.88■□□□□ 0.93
PSMD4-211ENST00000476855 RIPK4P57078 832 aa20.88■□□□□ 0.93
PSMD4-211ENST00000476855 NEUROD2Q15784 382 aa20.88■□□□□ 0.93
PSMD4-211ENST00000476855 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
PSMD4-211ENST00000476855 MAP3K5Q99683 1374 aa20.87■□□□□ 0.93
PSMD4-211ENST00000476855 CHD4Q14839 1912 aa20.87■□□□□ 0.93
PSMD4-211ENST00000476855 ITGB4P16144 1822 aa20.87■□□□□ 0.93
PSMD4-211ENST00000476855 ACSBG1Q96GR2 724 aa20.86■□□□□ 0.93
PSMD4-211ENST00000476855 GOLGB1Q14789 3259 aaKnown RBP20.86■□□□□ 0.93
PSMD4-211ENST00000476855 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
PSMD4-211ENST00000476855 WWC1Q8IX03 1113 aa20.85■□□□□ 0.93
PSMD4-211ENST00000476855 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
PSMD4-211ENST00000476855 NHSQ6T4R5 1651 aa20.85■□□□□ 0.93
PSMD4-211ENST00000476855 GPR162Q16538 588 aa20.84■□□□□ 0.93
PSMD4-211ENST00000476855 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
PSMD4-211ENST00000476855 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
PSMD4-211ENST00000476855 KDM3BQ7LBC6 1761 aa20.83■□□□□ 0.93
PSMD4-211ENST00000476855 CYP27B1O15528 508 aa20.83■□□□□ 0.93
PSMD4-211ENST00000476855 AKAP4Q5JQC9 854 aa20.83■□□□□ 0.93
PSMD4-211ENST00000476855 PAPPAQ13219 1627 aa20.82■□□□□ 0.92
PSMD4-211ENST00000476855 PCDH11XQ9BZA7 1347 aa20.82■□□□□ 0.92
PSMD4-211ENST00000476855 PCDH11YQ9BZA8 1340 aa20.82■□□□□ 0.92
PSMD4-211ENST00000476855 KDM6AO15550 1401 aaPredicted RBP20.82■□□□□ 0.92
PSMD4-211ENST00000476855 GNAT3A8MTJ3 354 aa20.82■□□□□ 0.92
PSMD4-211ENST00000476855 HTATSF1O43719 755 aaKnown RBP20.82■□□□□ 0.92
PSMD4-211ENST00000476855 PHKG2P15735 406 aa20.82■□□□□ 0.92
PSMD4-211ENST00000476855 LMOD3Q0VAK6 560 aa20.82■□□□□ 0.92
PSMD4-211ENST00000476855 MRC1P22897 1456 aa20.81■□□□□ 0.92
PSMD4-211ENST00000476855 ZNF827Q17R98 1081 aa20.81■□□□□ 0.92
PSMD4-211ENST00000476855 CEMIPQ8WUJ3 1361 aa20.81■□□□□ 0.92
PSMD4-211ENST00000476855 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
PSMD4-211ENST00000476855 GIGYF1O75420 1035 aaPredicted RBP20.79■□□□□ 0.92
PSMD4-211ENST00000476855 DCTN1Q14203 1278 aa20.79■□□□□ 0.92
PSMD4-211ENST00000476855 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
PSMD4-211ENST00000476855 WDR63Q8IWG1 891 aa20.79■□□□□ 0.92
PSMD4-211ENST00000476855 THUMPD2Q9BTF0 503 aaKnown RBP20.79■□□□□ 0.92
PSMD4-211ENST00000476855 LRRC4BQ9NT99 713 aa20.79■□□□□ 0.92
PSMD4-211ENST00000476855 KAT6BQ8WYB5 2073 aa20.79■□□□□ 0.92
PSMD4-211ENST00000476855 CEP350Q5VT06 3117 aa20.78■□□□□ 0.92
PSMD4-211ENST00000476855 MCM10Q7L590 875 aa20.78■□□□□ 0.92
PSMD4-211ENST00000476855 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
PSMD4-211ENST00000476855 NKX1-1Q15270 411 aaPredicted RBP20.77■□□□□ 0.92
PSMD4-211ENST00000476855 KLHL34Q8N239 644 aa20.77■□□□□ 0.92
PSMD4-211ENST00000476855 SLC16A10Q8TF71 515 aa20.77■□□□□ 0.92
PSMD4-211ENST00000476855 IL16Q14005 1332 aa20.77■□□□□ 0.91
PSMD4-211ENST00000476855 RNMTO43148 476 aaKnown RBP20.76■□□□□ 0.91
PSMD4-211ENST00000476855 POLD1P28340 1107 aa20.76■□□□□ 0.91
PSMD4-211ENST00000476855 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
PSMD4-211ENST00000476855 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
PSMD4-211ENST00000476855 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
PSMD4-211ENST00000476855 SPINK5Q9NQ38 1064 aaPredicted RBP20.76■□□□□ 0.91
PSMD4-211ENST00000476855 BTAF1O14981 1849 aa20.76■□□□□ 0.91
PSMD4-211ENST00000476855 MPRIPQ6WCQ1 1025 aa20.75■□□□□ 0.91
PSMD4-211ENST00000476855 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
PSMD4-211ENST00000476855 AKT1S1Q96B36 256 aa20.75■□□□□ 0.91
PSMD4-211ENST00000476855 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
PSMD4-211ENST00000476855 LGR6Q9HBX8 967 aa20.75■□□□□ 0.91
PSMD4-211ENST00000476855 HSP90AB1P08238 724 aaKnown RBP20.74■□□□□ 0.91
PSMD4-211ENST00000476855 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
PSMD4-211ENST00000476855 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
PSMD4-211ENST00000476855 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
PSMD4-211ENST00000476855 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
PSMD4-211ENST00000476855 SLC27A3Q5K4L6 730 aa20.73■□□□□ 0.91
PSMD4-211ENST00000476855 TRMT2AQ8IZ69 625 aaKnown RBP20.73■□□□□ 0.91
PSMD4-211ENST00000476855 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
PSMD4-211ENST00000476855 DCAF5Q96JK2 942 aa20.72■□□□□ 0.91
PSMD4-211ENST00000476855 PNPLA7Q6ZV29 1317 aa20.71■□□□□ 0.91
PSMD4-211ENST00000476855 E9PSI1 815 aa20.7■□□□□ 0.9
PSMD4-211ENST00000476855 IFT57Q9NWB7 429 aa20.7■□□□□ 0.9
PSMD4-211ENST00000476855 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.9
PSMD4-211ENST00000476855 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
PSMD4-211ENST00000476855 NLGN2Q8NFZ4 835 aa20.69■□□□□ 0.9
PSMD4-211ENST00000476855 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
PSMD4-211ENST00000476855 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
PSMD4-211ENST00000476855 CHL1O00533 1208 aa20.67■□□□□ 0.9
PSMD4-211ENST00000476855 GNAI1P63096 354 aa20.67■□□□□ 0.9
PSMD4-211ENST00000476855 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
PSMD4-211ENST00000476855 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
PSMD4-211ENST00000476855 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
PSMD4-211ENST00000476855 TAF7Q15545 349 aaPredicted RBP20.66■□□□□ 0.9
PSMD4-211ENST00000476855 C5P01031 1676 aa20.66■□□□□ 0.9
PSMD4-211ENST00000476855 COL24A1Q17RW2 1714 aa20.66■□□□□ 0.9
PSMD4-211ENST00000476855 GRIN3BO60391 1043 aa20.65■□□□□ 0.9
PSMD4-211ENST00000476855 KCNQ4P56696 695 aa20.65■□□□□ 0.9
PSMD4-211ENST00000476855 TEFQ10587 303 aa20.65■□□□□ 0.9
PSMD4-211ENST00000476855 TSR2Q969E8 191 aaKnown RBP20.65■□□□□ 0.9
PSMD4-211ENST00000476855 MBIPQ9NS73 344 aa20.65■□□□□ 0.9
PSMD4-211ENST00000476855 BABAM1Q9NWV8 329 aa20.65■□□□□ 0.9
PSMD4-211ENST00000476855 YBX3P16989 372 aaKnown RBP eCLIP20.64■□□□□ 0.895e-11■■□□□ 13.7
PSMD4-211ENST00000476855 SYTL4Q96C24 671 aaPredicted RBP20.64■□□□□ 0.89
PSMD4-211ENST00000476855 MYH16Q9H6N6 1097 aa20.64■□□□□ 0.89
PSMD4-211ENST00000476855 LAS1LQ9Y4W2 734 aaKnown RBP20.64■□□□□ 0.89
PSMD4-211ENST00000476855 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.89
PSMD4-211ENST00000476855 CACNA1FO60840 1977 aa20.63■□□□□ 0.89
PSMD4-211ENST00000476855 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
PSMD4-211ENST00000476855 NFATC2IPQ8NCF5 419 aa20.62■□□□□ 0.89
PSMD4-211ENST00000476855 CABP4P57796 275 aa20.61■□□□□ 0.89
PSMD4-211ENST00000476855 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
PSMD4-211ENST00000476855 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms