RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CLGNO14967 610 aa16.48■□□□□ 0.23
HDAC1-206ENST00000476391 H2AFXP16104 143 aaPredicted RBP16.48■□□□□ 0.23
HDAC1-206ENST00000476391 MCCP23508 829 aa16.48■□□□□ 0.23
HDAC1-206ENST00000476391 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 CDC42BPBQ9Y5S2 1711 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 GTF2A1P52655 376 aaPredicted RBP16.47■□□□□ 0.23
HDAC1-206ENST00000476391 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 ABCA8O94911 1581 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 NSD2O96028 1365 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 SLU7O95391 586 aaKnown RBP16.47■□□□□ 0.23
HDAC1-206ENST00000476391 AXDND1Q5T1B0 1012 aaPredicted RBP16.47■□□□□ 0.23
HDAC1-206ENST00000476391 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 BRMS1Q9HCU9 246 aa16.47■□□□□ 0.23
HDAC1-206ENST00000476391 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-206ENST00000476391 PTPRCP08575 1304 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 CASQ1P31415 396 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 TPM4P67936 248 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 ICE2Q659A1 982 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
HDAC1-206ENST00000476391 FHOD1Q9Y613 1164 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 NYAP1Q6ZVC0 841 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 DRC7Q8IY82 874 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-206ENST00000476391 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
HDAC1-206ENST00000476391 ZNF592Q92610 1267 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
HDAC1-206ENST00000476391 PREX2Q70Z35 1606 aa16.45■□□□□ 0.22
HDAC1-206ENST00000476391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
HDAC1-206ENST00000476391 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
HDAC1-206ENST00000476391 PTPN14Q15678 1187 aa16.45■□□□□ 0.22
HDAC1-206ENST00000476391 PLA2G4DQ86XP0 818 aa16.45■□□□□ 0.22
HDAC1-206ENST00000476391 KNDC1Q76NI1 1749 aa16.45■□□□□ 0.22
HDAC1-206ENST00000476391 MYO1CO00159 1063 aa16.45■□□□□ 0.22
HDAC1-206ENST00000476391 NEMFO60524 1076 aa16.45■□□□□ 0.22
HDAC1-206ENST00000476391 SYT10Q6XYQ8 523 aa16.44■□□□□ 0.22
HDAC1-206ENST00000476391 ZBTB9Q96C00 473 aa16.44■□□□□ 0.22
HDAC1-206ENST00000476391 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
HDAC1-206ENST00000476391 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
HDAC1-206ENST00000476391 ZNF75DP51815 510 aa16.44■□□□□ 0.22
HDAC1-206ENST00000476391 GPS2Q13227 327 aa16.44■□□□□ 0.22
HDAC1-206ENST00000476391 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
HDAC1-206ENST00000476391 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 ERBB3P21860 1342 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 KCNA4P22459 653 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 MYCBPQ99417 103 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-206ENST00000476391 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDAC1-206ENST00000476391 V9GYY5 206 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-206ENST00000476391 PNMA6AP0CW24 399 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-206ENST00000476391 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
HDAC1-206ENST00000476391 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 NRBP1Q9UHY1 535 aa16.43■□□□□ 0.22
HDAC1-206ENST00000476391 CDC25BP30305 580 aa16.42■□□□□ 0.22
HDAC1-206ENST00000476391 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
HDAC1-206ENST00000476391 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
HDAC1-206ENST00000476391 KRBA2Q6ZNG9 492 aa16.42■□□□□ 0.22
HDAC1-206ENST00000476391 NCAPGQ9BPX3 1015 aa16.42■□□□□ 0.22
HDAC1-206ENST00000476391 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
HDAC1-206ENST00000476391 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
HDAC1-206ENST00000476391 TRIM5Q9C035 493 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 ELP1O95163 1332 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 GOLGA6L1Q8N7Z2 621 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 NEK11Q8NG66 645 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
HDAC1-206ENST00000476391 OSBPL3Q9H4L5 887 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
HDAC1-206ENST00000476391 FIBPO43427 364 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 VAMP4O75379 141 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 F13A1P00488 732 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 ANKRD44Q8N8A2 993 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 MRVI1Q9Y6F6 885 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 SYCP2Q9BX26 1530 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 STX6O43752 255 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 GUCY2CP25092 1073 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 CLCN6P51797 869 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 MAP3K11Q16584 847 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 LUZP1Q86V48 1076 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
HDAC1-206ENST00000476391 C10orf67Q8IYJ2 551 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
HDAC1-206ENST00000476391 CFAP65Q6ZU64 1925 aaKnown RBP16.4■□□□□ 0.22
HDAC1-206ENST00000476391 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 ATP8B1O43520 1251 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 TYRO3Q06418 890 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
HDAC1-206ENST00000476391 ZSCAN26Q16670 478 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 LRRC8AQ8IWT6 810 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 TDRD7Q8NHU6 1098 aaKnown RBP16.39■□□□□ 0.21
HDAC1-206ENST00000476391 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 ATP10BO94823 1461 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 ZRANB2O95218 330 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC1-206ENST00000476391 NOL8Q76FK4 1167 aaKnown RBP16.39■□□□□ 0.21
HDAC1-206ENST00000476391 SIRT1Q96EB6 747 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 L2HGDHQ9H9P8 463 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
HDAC1-206ENST00000476391 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
HDAC1-206ENST00000476391 APPP05067 770 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms