RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 SCN11AQ9UI33 1791 aa43.49■■■■■ 4.55
CHKB-207ENST00000476289 CABP4P57796 275 aa43.48■■■■■ 4.55
CHKB-207ENST00000476289 AK7Q96M32 723 aa43.48■■■■■ 4.55
CHKB-207ENST00000476289 SYT17Q9BSW7 474 aa43.48■■■■■ 4.55
CHKB-207ENST00000476289 ATP6V1AP38606 617 aa43.45■■■■■ 4.55
CHKB-207ENST00000476289 POLD1P28340 1107 aa43.44■■■■■ 4.54
CHKB-207ENST00000476289 AKAP4Q5JQC9 854 aa43.43■■■■■ 4.54
CHKB-207ENST00000476289 SMIM5Q71RC9 77 aa43.43■■■■■ 4.54
CHKB-207ENST00000476289 SLC4A9Q96Q91 983 aa43.43■■■■■ 4.54
CHKB-207ENST00000476289 ZNF831Q5JPB2 1677 aa43.43■■■■■ 4.54
CHKB-207ENST00000476289 MAP3K5Q99683 1374 aa43.41■■■■■ 4.54
CHKB-207ENST00000476289 FLAD1Q8NFF5 587 aa43.41■■■■■ 4.54
CHKB-207ENST00000476289 U2SURPO15042 1029 aaKnown RBP43.4■■■■■ 4.54
CHKB-207ENST00000476289 MSL1Q68DK7 614 aa43.4■■■■■ 4.54
CHKB-207ENST00000476289 NFATC2IPQ8NCF5 419 aa43.39■■■■■ 4.54
CHKB-207ENST00000476289 VIRMAQ69YN4 1812 aaKnown RBP43.38■■■■■ 4.54
CHKB-207ENST00000476289 PHF14O94880 888 aa43.38■■■■■ 4.53
CHKB-207ENST00000476289 MTHFSDQ2M296 383 aaKnown RBP43.38■■■■■ 4.53
CHKB-207ENST00000476289 RBM42Q9BTD8 480 aaKnown RBP43.38■■■■■ 4.53
CHKB-207ENST00000476289 COL5A3P25940 1745 aaPredicted RBP43.36■■■■■ 4.53
CHKB-207ENST00000476289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP43.36■■■■■ 4.53
CHKB-207ENST00000476289 PPP2R1AP30153 589 aa43.36■■■■■ 4.53
CHKB-207ENST00000476289 LGR6Q9HBX8 967 aa43.35■■■■■ 4.53
CHKB-207ENST00000476289 ADAMTS7Q9UKP4 1686 aa43.34■■■■■ 4.53
CHKB-207ENST00000476289 MRC1P22897 1456 aa43.34■■■■■ 4.53
CHKB-207ENST00000476289 GNPATO15228 680 aa43.33■■■■■ 4.53
CHKB-207ENST00000476289 SSFA2P28290 1259 aa43.33■■■■■ 4.53
CHKB-207ENST00000476289 DCAF8L1A6NGE4 600 aa43.32■■■■■ 4.53
CHKB-207ENST00000476289 KLHL34Q8N239 644 aa43.31■■■■■ 4.52
CHKB-207ENST00000476289 CFAP53Q96M91 514 aa43.31■■■■■ 4.52
CHKB-207ENST00000476289 RNMTO43148 476 aaKnown RBP43.3■■■■■ 4.52
CHKB-207ENST00000476289 SLC52A2Q9HAB3 445 aa43.3■■■■■ 4.52
CHKB-207ENST00000476289 PTCD1O75127 700 aaKnown RBP43.29■■■■■ 4.52
CHKB-207ENST00000476289 TJP1Q07157 1748 aa43.25■■■■■ 4.51
CHKB-207ENST00000476289 CICQ96RK0 1608 aaPredicted RBP43.24■■■■■ 4.51
CHKB-207ENST00000476289 UTRNP46939 3433 aa43.23■■■■■ 4.51
CHKB-207ENST00000476289 MYH14Q7Z406 1995 aaKnown RBP43.23■■■■■ 4.51
CHKB-207ENST00000476289 CNTNAP4Q9C0A0 1308 aa43.22■■■■■ 4.51
CHKB-207ENST00000476289 NLGN2Q8NFZ4 835 aa43.21■■■■■ 4.51
CHKB-207ENST00000476289 RC3H1Q5TC82 1133 aaKnown RBP43.2■■■■■ 4.51
CHKB-207ENST00000476289 RSPH6AQ9H0K4 717 aa43.2■■■■■ 4.51
CHKB-207ENST00000476289 RTCBQ9Y3I0 505 aaKnown RBP43.18■■■■■ 4.5
CHKB-207ENST00000476289 PRKAR2BP31323 418 aa43.17■■■■■ 4.5
CHKB-207ENST00000476289 GAS2L2Q8NHY3 880 aa43.17■■■■■ 4.5
CHKB-207ENST00000476289 NUDCQ9Y266 331 aa43.17■■■■■ 4.5
CHKB-207ENST00000476289 SLC39A6Q13433 755 aa43.16■■■■■ 4.5
CHKB-207ENST00000476289 PHACTR3Q96KR7 559 aa43.16■■■■■ 4.5
CHKB-207ENST00000476289 KCPQ6ZWJ8 1503 aa43.16■■■■■ 4.5
CHKB-207ENST00000476289 GOLGB1Q14789 3259 aaKnown RBP43.14■■■■■ 4.5
CHKB-207ENST00000476289 U2AF1L5P0DN76 240 aaPredicted RBP43.13■■■■■ 4.49
CHKB-207ENST00000476289 YY1P25490 414 aa43.13■■■■■ 4.49
CHKB-207ENST00000476289 U2AF1Q01081 240 aaKnown RBP eCLIP43.13■■■■■ 4.49
CHKB-207ENST00000476289 C4AP0C0L4 1744 aa43.12■■■■■ 4.49
CHKB-207ENST00000476289 RPS6KA4O75676 772 aa43.12■■■■■ 4.49
CHKB-207ENST00000476289 CRKLP46109 303 aaKnown RBP43.12■■■■■ 4.49
CHKB-207ENST00000476289 TRAPPC3LQ5T215 181 aa43.12■■■■■ 4.49
CHKB-207ENST00000476289 GNAT3A8MTJ3 354 aa43.11■■■■■ 4.49
CHKB-207ENST00000476289 IL17REQ8NFR9 667 aa43.11■■■■■ 4.49
CHKB-207ENST00000476289 ARHGEF1Q92888 912 aaKnown RBP43.1■■■■■ 4.49
CHKB-207ENST00000476289 UBR2Q8IWV8 1755 aa43.1■■■■■ 4.49
CHKB-207ENST00000476289 SIPA1L3O60292 1781 aaPredicted RBP43.09■■■■■ 4.49
CHKB-207ENST00000476289 ADRA2BP18089 450 aa43.09■■■■■ 4.49
CHKB-207ENST00000476289 DNAJC10Q8IXB1 793 aa43.08■■■■■ 4.49
CHKB-207ENST00000476289 GPR162Q16538 588 aa43.05■■■■■ 4.48
CHKB-207ENST00000476289 CD2APQ9Y5K6 639 aa43.05■■■■■ 4.48
CHKB-207ENST00000476289 FCHSD2O94868 740 aa43.03■■■■■ 4.48
CHKB-207ENST00000476289 INTS5Q6P9B9 1019 aaKnown RBP43.03■■■■■ 4.48
CHKB-207ENST00000476289 TEFQ10587 303 aa43.02■■■■■ 4.48
CHKB-207ENST00000476289 CEMIPQ8WUJ3 1361 aa43.02■■■■■ 4.48
CHKB-207ENST00000476289 RFC4P35249 363 aa43.01■■■■■ 4.48
CHKB-207ENST00000476289 PELP1Q8IZL8 1130 aaKnown RBP43.01■■■■■ 4.48
CHKB-207ENST00000476289 MMP10P09238 476 aa43■■■■■ 4.47
CHKB-207ENST00000476289 GYS1P13807 737 aa42.99■■■■■ 4.47
CHKB-207ENST00000476289 DDX10Q13206 875 aaKnown RBP42.99■■■■■ 4.47
CHKB-207ENST00000476289 CYP19A1P11511 503 aaPredicted RBP42.98■■■■■ 4.47
CHKB-207ENST00000476289 CCDC87Q9NVE4 849 aa42.98■■■■■ 4.47
CHKB-207ENST00000476289 CHD4Q14839 1912 aa42.97■■■■■ 4.47
CHKB-207ENST00000476289 NLGN1Q8N2Q7 840 aa42.96■■■■■ 4.47
CHKB-207ENST00000476289 TTC5Q8N0Z6 440 aa42.95■■■■■ 4.47
CHKB-207ENST00000476289 VSIG10Q8N0Z9 540 aa42.95■■■■■ 4.47
CHKB-207ENST00000476289 YBX3P16989 372 aaKnown RBP eCLIP42.94■■■■■ 4.46
CHKB-207ENST00000476289 SRP68Q9UHB9 627 aaKnown RBP42.94■■■■■ 4.46
CHKB-207ENST00000476289 ZNF790Q6PG37 636 aa42.93■■■■■ 4.46
CHKB-207ENST00000476289 ZNF496Q96IT1 587 aaPredicted RBP42.92■■■■■ 4.46
CHKB-207ENST00000476289 SOS1Q07889 1333 aaPredicted RBP42.92■■■■■ 4.46
CHKB-207ENST00000476289 USP42Q9H9J4 1324 aaKnown RBP42.92■■■■■ 4.46
CHKB-207ENST00000476289 ZBTB1Q9Y2K1 713 aa42.9■■■■■ 4.46
CHKB-207ENST00000476289 MCM10Q7L590 875 aa42.88■■■■■ 4.45
CHKB-207ENST00000476289 KIF13BQ9NQT8 1826 aa42.87■■■■■ 4.45
CHKB-207ENST00000476289 RALBP1Q15311 655 aa42.87■■■■■ 4.45
CHKB-207ENST00000476289 HEG1Q9ULI3 1381 aa42.87■■■■■ 4.45
CHKB-207ENST00000476289 RTF1Q92541 710 aaKnown RBP42.85■■■■■ 4.45
CHKB-207ENST00000476289 KCNQ3O43525 872 aa42.84■■■■■ 4.45
CHKB-207ENST00000476289 DCTN1Q14203 1278 aa42.84■■■■■ 4.45
CHKB-207ENST00000476289 FKBP8Q14318 412 aa42.84■■■■■ 4.45
CHKB-207ENST00000476289 KIAA1551Q9HCM1 1747 aa42.84■■■■■ 4.45
CHKB-207ENST00000476289 C10orf71Q711Q0 1435 aa42.83■■■■■ 4.45
CHKB-207ENST00000476289 COL15A1P39059 1388 aa42.83■■■■■ 4.45
CHKB-207ENST00000476289 BTBD11A6QL63 1104 aa42.83■■■■■ 4.45
CHKB-207ENST00000476289 DLG5Q8TDM6 1919 aa42.82■■■■■ 4.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms