RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
TMCO1-205ENST00000476143 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
TMCO1-205ENST00000476143 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
TMCO1-205ENST00000476143 COL23A1Q86Y22 540 aaPredicted RBP18.48■□□□□ 0.55
TMCO1-205ENST00000476143 KLHL34Q8N239 644 aa18.48■□□□□ 0.55
TMCO1-205ENST00000476143 FHDC1Q9C0D6 1143 aaPredicted RBP18.48■□□□□ 0.55
TMCO1-205ENST00000476143 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
TMCO1-205ENST00000476143 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
TMCO1-205ENST00000476143 PHF14O94880 888 aa18.46■□□□□ 0.55
TMCO1-205ENST00000476143 SSFA2P28290 1259 aa18.46■□□□□ 0.55
TMCO1-205ENST00000476143 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
TMCO1-205ENST00000476143 SGIP1Q9BQI5 828 aa18.46■□□□□ 0.55
TMCO1-205ENST00000476143 SYT17Q9BSW7 474 aa18.46■□□□□ 0.55
TMCO1-205ENST00000476143 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
TMCO1-205ENST00000476143 GNPATO15228 680 aa18.45■□□□□ 0.54
TMCO1-205ENST00000476143 PPP2R1AP30153 589 aa18.45■□□□□ 0.54
TMCO1-205ENST00000476143 UBR3Q6ZT12 1888 aa18.44■□□□□ 0.54
TMCO1-205ENST00000476143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
TMCO1-205ENST00000476143 NEFMP07197 916 aa18.44■□□□□ 0.54
TMCO1-205ENST00000476143 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
TMCO1-205ENST00000476143 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
TMCO1-205ENST00000476143 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
TMCO1-205ENST00000476143 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
TMCO1-205ENST00000476143 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
TMCO1-205ENST00000476143 ITPK1Q13572 414 aa18.43■□□□□ 0.54
TMCO1-205ENST00000476143 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
TMCO1-205ENST00000476143 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
TMCO1-205ENST00000476143 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
TMCO1-205ENST00000476143 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
TMCO1-205ENST00000476143 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
TMCO1-205ENST00000476143 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
TMCO1-205ENST00000476143 MSL1Q68DK7 614 aa18.42■□□□□ 0.54
TMCO1-205ENST00000476143 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
TMCO1-205ENST00000476143 PRKAR2BP31323 418 aa18.4■□□□□ 0.54
TMCO1-205ENST00000476143 TEFQ10587 303 aa18.4■□□□□ 0.54
TMCO1-205ENST00000476143 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
TMCO1-205ENST00000476143 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
TMCO1-205ENST00000476143 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
TMCO1-205ENST00000476143 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
TMCO1-205ENST00000476143 ADRA2BP18089 450 aa18.39■□□□□ 0.53
TMCO1-205ENST00000476143 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
TMCO1-205ENST00000476143 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
TMCO1-205ENST00000476143 MRC1P22897 1456 aa18.39■□□□□ 0.53
TMCO1-205ENST00000476143 FCHSD2O94868 740 aa18.37■□□□□ 0.53
TMCO1-205ENST00000476143 RFC4P35249 363 aa18.37■□□□□ 0.53
TMCO1-205ENST00000476143 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
TMCO1-205ENST00000476143 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
TMCO1-205ENST00000476143 GPR162Q16538 588 aa18.36■□□□□ 0.53
TMCO1-205ENST00000476143 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
TMCO1-205ENST00000476143 PNNQ9H307 717 aaKnown RBP18.36■□□□□ 0.53
TMCO1-205ENST00000476143 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
TMCO1-205ENST00000476143 RPS6KA4O75676 772 aa18.35■□□□□ 0.53
TMCO1-205ENST00000476143 YY1P25490 414 aa18.35■□□□□ 0.53
TMCO1-205ENST00000476143 RALBP1Q15311 655 aa18.35■□□□□ 0.53
TMCO1-205ENST00000476143 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
TMCO1-205ENST00000476143 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
TMCO1-205ENST00000476143 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
TMCO1-205ENST00000476143 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
TMCO1-205ENST00000476143 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
TMCO1-205ENST00000476143 TJP1Q07157 1748 aa18.33■□□□□ 0.52
TMCO1-205ENST00000476143 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
TMCO1-205ENST00000476143 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
TMCO1-205ENST00000476143 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
TMCO1-205ENST00000476143 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.52
TMCO1-205ENST00000476143 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
TMCO1-205ENST00000476143 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
TMCO1-205ENST00000476143 SMIM5Q71RC9 77 aa18.31■□□□□ 0.52
TMCO1-205ENST00000476143 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
TMCO1-205ENST00000476143 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
TMCO1-205ENST00000476143 MAPK8IP3Q9UPT6 1336 aa18.3■□□□□ 0.52
TMCO1-205ENST00000476143 STARD3NLO95772 234 aa18.3■□□□□ 0.52
TMCO1-205ENST00000476143 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
TMCO1-205ENST00000476143 DNAJC10Q8IXB1 793 aa18.3■□□□□ 0.52
TMCO1-205ENST00000476143 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
TMCO1-205ENST00000476143 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
TMCO1-205ENST00000476143 HTATSF1O43719 755 aaKnown RBP18.29■□□□□ 0.52
TMCO1-205ENST00000476143 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
TMCO1-205ENST00000476143 MYH14Q7Z406 1995 aaKnown RBP18.29■□□□□ 0.52
TMCO1-205ENST00000476143 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
TMCO1-205ENST00000476143 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 BTBD11A6QL63 1104 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 ZPR1O75312 459 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 MMP10P09238 476 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 C4AP0C0L4 1744 aa18.28■□□□□ 0.52
TMCO1-205ENST00000476143 CHD4Q14839 1912 aa18.27■□□□□ 0.52
TMCO1-205ENST00000476143 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
TMCO1-205ENST00000476143 GRIN3BO60391 1043 aa18.27■□□□□ 0.52
TMCO1-205ENST00000476143 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.51
TMCO1-205ENST00000476143 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
TMCO1-205ENST00000476143 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
TMCO1-205ENST00000476143 GYS1P13807 737 aa18.25■□□□□ 0.51
TMCO1-205ENST00000476143 INTS5Q6P9B9 1019 aaKnown RBP18.25■□□□□ 0.51
TMCO1-205ENST00000476143 HEG1Q9ULI3 1381 aa18.25■□□□□ 0.51
TMCO1-205ENST00000476143 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
TMCO1-205ENST00000476143 A0A087WZG4 1122 aa18.24■□□□□ 0.51
TMCO1-205ENST00000476143 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms