RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	MAN1A1	P33908	653 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	ZNF394	Q53GI3	561 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	MCTP2	Q6DN12	878 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	IQCE	Q6IPM2	695 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	C16orf87	Q6PH81	154 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	UBE2Q1	Q7Z7E8	422 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	C11orf96	Q7Z7L8	435 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	TRIM74	Q86UV6	250 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	TRIM73	Q86UV7	250 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	CADPS2	Q86UW7	1296 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	LMNTD2	Q8IXW0	634 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	MYOCD	Q8IZQ8	938 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	RETREG2	Q8NC44	543 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	MYRIP	Q8NFW9	859 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	HDAC7	Q8WUI4	952 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	UBXN4	Q92575	508 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC47	Q96A33	483 aa	Known RBP	4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	C8orf37	Q96NL8	207 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	FMNL2	Q96PY5	1086 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	PPP1R9B	Q96SB3	815 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	CEP89	Q96ST8	783 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	PAGR1	Q9BTK6	254 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	SLC24A3	Q9HC58	644 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	SERPINA10	Q9UK55	444 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	STK24	Q9Y6E0	443 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	SCIN	Q9Y6U3	715 aa		4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.57	□□□□□ -1.68
LSM2-211	ENST00000475835	CASKIN1	Q8WXD9	1431 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835		A0A1B0GUL7	405 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	RBM47	A0AV96	593 aa	Known RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	SHTN1	A0MZ66	631 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	PABPN1L	A6NDY0	278 aa	Known RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	U2SURP	O15042	1029 aa	Known RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	C21orf2	O43822	256 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	CAND2	O75155	1236 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	REC8	O95072	547 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	MSL3P1	P0C860	447 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	FOSL1	P15407	271 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	ALDH1B1	P30837	517 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	STIP1	P31948	543 aa	Known RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	MAP2K2	P36507	400 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	RBM5	P52756	815 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	FOSB	P53539	338 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	NUCB2	P80303	420 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	SFSWAP	Q12872	951 aa	Known RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	PDIA5	Q14554	519 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	SYCP1	Q15431	976 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	ZNF662	Q6ZS27	426 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	NCAPG2	Q86XI2	1143 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	NBPF15	Q8N660	670 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	ANKRD20A12P	Q8NF67	263 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	PMFBP1	Q8TBY8	1022 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	TNPO1	Q92973	898 aa	Known RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	TATDN2	Q93075	761 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	CDK5RAP3	Q96JB5	506 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	KCNH8	Q96L42	1107 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	TRIM7	Q9C029	511 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	INO80B	Q9C086	356 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC39	Q9UFE4	941 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	FAN1	Q9Y2M0	1017 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	JRKL	Q9Y4A0	524 aa		4.56	□□□□□ -1.68
LSM2-211	ENST00000475835	FHOD3	Q2V2M9	1422 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	FMN1	Q68DA7	1419 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	FGD6	Q6ZV73	1430 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	AKNA	Q7Z591	1439 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	NPHP1	O15259	732 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	E2F6	O75461	281 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	FAM163B	P0C2L3	166 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	RDX	P35241	583 aa	Known RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	CBX1	P83916	185 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	XPC	Q01831	940 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	RAD51AP2	Q09MP3	1159 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC15	Q0P6D6	951 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	MLEC	Q14165	292 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	RBBP5	Q15291	538 aa	Known RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	SLC5A9	Q2M3M2	681 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC92	Q53HC0	331 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	MFSD4B	Q5TF39	518 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC174	Q6PII3	467 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	LEKR1	Q6ZMV7	388 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	LCA5	Q86VQ0	697 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	HSCB	Q8IWL3	235 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	DRC7	Q8IY82	874 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	RPUSD2	Q8IZ73	545 aa	Known RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	STAG1	Q8WVM7	1258 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	GIMAP1	Q8WWP7	306 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	TRIM52	Q96A61	297 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	SIN3A	Q96ST3	1273 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	CDC5L	Q99459	802 aa	Known RBP	4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	SEZ6L	Q9BYH1	1024 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	IRAK4	Q9NWZ3	460 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	QPCTL	Q9NXS2	382 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	TMOD4	Q9NZQ9	345 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	BLOC1S6	Q9UL45	172 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	TRAK1	Q9UPV9	953 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms