RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 SPA17Q15506 151 aa20.7■□□□□ 0.9
LPCAT1-202ENST00000475622 PRDM11Q9NQV5 511 aa20.7■□□□□ 0.9
LPCAT1-202ENST00000475622 KIF18AQ8NI77 898 aa20.7■□□□□ 0.9
LPCAT1-202ENST00000475622 BOLA2Q9H3K6 86 aa20.7■□□□□ 0.9
LPCAT1-202ENST00000475622 METTL24Q5JXM2 366 aa20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 RAB11FIP3O75154 756 aa20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 URI1O94763 535 aaPredicted RBP20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 MATR3P43243 847 aaKnown RBP eCLIP20.69■□□□□ 0.91e-23■■□□□ 12.5
LPCAT1-202ENST00000475622 MCM10Q7L590 875 aa20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 SKAP1Q86WV1 359 aa20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 SLC26A8Q96RN1 970 aa20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
LPCAT1-202ENST00000475622 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
LPCAT1-202ENST00000475622 NSD3Q9BZ95 1437 aa20.68■□□□□ 0.9
LPCAT1-202ENST00000475622 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
LPCAT1-202ENST00000475622 KIF5CO60282 957 aa20.68■□□□□ 0.9
LPCAT1-202ENST00000475622 KIF4BQ2VIQ3 1234 aa20.68■□□□□ 0.9
LPCAT1-202ENST00000475622 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
LPCAT1-202ENST00000475622 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 SH2B1Q9NRF2 756 aaPredicted RBP20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 TOP1P11387 765 aaKnown RBP20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 SSFA2P28290 1259 aa20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 GUCY1B3Q02153 619 aa20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 MPHOSPH10O00566 681 aaKnown RBP20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 C8orf76Q96K31 380 aa20.67■□□□□ 0.9
LPCAT1-202ENST00000475622 PPP1R12BO60237 982 aaPredicted RBP20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 CLIP2Q9UDT6 1046 aa20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 MINDY4BA8MYZ0 360 aa20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 DESP17661 470 aa20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 NUTM2BA6NNL0 878 aaPredicted RBP20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 NUTM2EB1AL46 878 aaPredicted RBP20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 XPCQ01831 940 aaPredicted RBP20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 NUTM2AQ8IVF1 878 aaPredicted RBP20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 CBX1P83916 185 aa20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 FKBP15Q5T1M5 1219 aa20.66■□□□□ 0.9
LPCAT1-202ENST00000475622 CASQ1P31415 396 aa20.65■□□□□ 0.9
LPCAT1-202ENST00000475622 INCENPQ9NQS7 918 aa20.65■□□□□ 0.9
LPCAT1-202ENST00000475622 AKAP2Q9Y2D5 859 aa20.65■□□□□ 0.9
LPCAT1-202ENST00000475622 CKAP2LQ8IYA6 745 aa20.64■□□□□ 0.9
LPCAT1-202ENST00000475622 SHTN1A0MZ66 631 aa20.64■□□□□ 0.9
LPCAT1-202ENST00000475622 CCDC113Q9H0I3 377 aa20.64■□□□□ 0.9
LPCAT1-202ENST00000475622 USP25Q9UHP3 1055 aa20.64■□□□□ 0.9
LPCAT1-202ENST00000475622 IFIT1P09914 478 aaKnown RBP20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 CACNA2D4Q7Z3S7 1137 aa20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 DYDC1Q8WWB3 177 aa20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 CETN2P41208 172 aa20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 NEBLO76041 1014 aa20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 ZC3H6P61129 1189 aaKnown RBP20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 SEC63Q9UGP8 760 aaKnown RBP20.64■□□□□ 0.89
LPCAT1-202ENST00000475622 NAPBQ9H115 298 aa20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 ALDH1L2Q3SY69 923 aa20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 CCDC196A0A1B0GTZ2 297 aa20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 POTEJP0CG39 1038 aa20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 LARP1Q6PKG0 1096 aaKnown RBP20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 CCDC82Q8N4S0 544 aa20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 TNPO1Q92973 898 aaKnown RBP20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 MAP9Q49MG5 647 aa20.63■□□□□ 0.89
LPCAT1-202ENST00000475622 RPGRIP1LQ68CZ1 1315 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 STARD3NLO95772 234 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 PRDM10Q9NQV6 1147 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 LIMCH1Q9UPQ0 1083 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 MAP2K1Q02750 393 aaPredicted RBP20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 TRMT1Q9NXH9 659 aaKnown RBP20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 LUZP1Q86V48 1076 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 CCDC8Q9H0W5 538 aaPredicted RBP20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 CCDC61Q9Y6R9 512 aa20.62■□□□□ 0.89
LPCAT1-202ENST00000475622 TNNT1P13805 278 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 TSG101Q99816 390 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 MKNK2Q9HBH9 465 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 DNA2P51530 1060 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 CPLX3Q8WVH0 158 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 MYD88Q99836 296 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 F6X3S4 739 aa20.61■□□□□ 0.89
LPCAT1-202ENST00000475622 CTAGE5O15320 804 aa20.6■□□□□ 0.89
LPCAT1-202ENST00000475622 HMGB1P09429 215 aaKnown RBP20.6■□□□□ 0.89
LPCAT1-202ENST00000475622 CTCFLQ8NI51 663 aaPredicted RBP20.6■□□□□ 0.89
LPCAT1-202ENST00000475622 PLEKHH1Q9ULM0 1364 aa20.6■□□□□ 0.89
LPCAT1-202ENST00000475622 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
LPCAT1-202ENST00000475622 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
LPCAT1-202ENST00000475622 VPS36Q86VN1 386 aa20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 C16orf45Q96MC5 204 aaPredicted RBP20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 LARP6Q9BRS8 491 aaKnown RBP20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 CNNM3Q8NE01 707 aa20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 NUP88Q99567 741 aaPredicted RBP20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 PHAXQ9H814 394 aaKnown RBP20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 GDPD2Q9HCC8 539 aa20.59■□□□□ 0.89
LPCAT1-202ENST00000475622 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
LPCAT1-202ENST00000475622 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.89
LPCAT1-202ENST00000475622 PLEKHH2Q8IVE3 1493 aa20.58■□□□□ 0.89
LPCAT1-202ENST00000475622 FSIP1Q8NA03 581 aa20.58■□□□□ 0.89
LPCAT1-202ENST00000475622 SLC12A7Q9Y666 1083 aa20.58■□□□□ 0.89
LPCAT1-202ENST00000475622 CCDC91Q7Z6B0 441 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms